Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p18760 Brassica napus
Aa31LG4G17490 Aethionema arabicum
Actinidia32853 Actinidia chinensis
Actinidia32854 Actinidia chinensis
Actinidia34118 Actinidia chinensis
Ah.07g207080 Amaranthus hybridus
AL5G28500 Arabidopsis lyrata
Aqoxy7G00354 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0K51C9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4R282L Arachis hypogaea
AT3G48990 Arabidopsis thaliana
ATR0680G178 Amborella trichopoda
Atru.chr1.447 Acer truncatum
Atru.chr9.2224 Acer truncatum
Atru.chr9.2225 Acer truncatum
Atru.chr9.2226 Acer truncatum
AUR62015970 Chenopodium quinoa
AUR62021176 Chenopodium quinoa
BcaB01g00762 Brassica carinata
BcaC07g39375 Brassica carinata
BolC8t50020H Brassica oleracea
BraA06t24957Z Brassica rapa
C08p23960 Brassica napus
CAN.G307.4 Capsicum annuum
CANSAT21G0506 Cannabis sativa
CARHR157800 Cardamine hirsuta
CARHR157810 Cardamine hirsuta
Carub.0005s1516 Capsella rubella
Ca_29649_v3 Cicer arietinum L.
Ca_29650_v3 Cicer arietinum L.
Ca_29691_v3 Cicer arietinum L.
CBR_g39225 Chara braunii
Cc02_g02860 Coffea canephora
CDE09G0626 Ceratophyllum demersum
CDE11G0733 Ceratophyllum demersum
Cfa012159 Carpinus fangiana
Cfa021259 Carpinus fangiana
Cfa022332 Carpinus fangiana
Ciclev10004732m.g Citrus clementina
CiPaw.03G107200 Carya illinoinensis
CiPaw.11G137100 Carya illinoinensis
CiPaw.12G094400 Carya illinoinensis
ClCG01G002840 Citrullus lanatus
ClCG01G004420 Citrullus lanatus
COL.COLO4_34442 Corchorus olitorius
Cpa.g.sc107.60 Carica papaya
Cpa.g.sc74.15 Carica papaya
CsaV3_5G002930 Cucumis sativus L.
CsaV3_5G004640 Cucumis sativus L.
CSS0004403 Camellia sinensis var. sinensis
DCAR_009369 Daucus carota
DCAR_020245 Daucus carota
Dinv28432 Davidia involucrata
Dinv35217 Davidia involucrata
Duzib068G0999 Durio zibethinus
Duzib205G1239 Durio zibethinus
ECA232G0402 Erigeron canadensis
EL10Ac3g05630 Beta vulgaris
Eucgr.E00577 Eucalyptus grandis
Eucgr.E00581 Eucalyptus grandis
Eucgr.E00583 Eucalyptus grandis
Eucgr.E00586 Eucalyptus grandis
Eucgr.E00589 Eucalyptus grandis
Eucgr.E00591 Eucalyptus grandis
Eucgr.E00593 Eucalyptus grandis
Eucgr.G00721 Eucalyptus grandis
FAN04G0756 Fragaria x ananassa
FAN08G0565 Fragaria x ananassa
FAN13G1872 Fragaria x ananassa
FvH4_5g02080 Fragaria vesca
Glyma.09G138100 Glycine max
Glyma.11G198300 Glycine max
Glyma.20G159300 Glycine max
Gohir.A08G181200 Gossypium hirsutum
Gohir.D08G199900 Gossypium hirsutum
Gorai.004G210700 Gossypium raimondii
GSVIVG01019771001 Vitis vinifera
GSVIVG01028940001 Vitis vinifera
HanXRQChr09g0253691 Helianthus annuus
Haze_08868 Corylus avellana
Haze_13682 Corylus avellana
Haze_13690 Corylus avellana
HPP92_020856 Vanilla planifolia
HPP92_025726 Vanilla planifolia
Hund04753 Selenicereus undatus
Hund11742 Selenicereus undatus
Lalb_Chr03g0034601 Lupinus albus
Lalb_Chr19g0130791 Lupinus albus
Lj1A998T45 Lonicera japonica
Lj2g0018183 Lotus japonicus
Lsat_1_v5_gn_9_55680 Lactuca sativa
Manes.01G062800 Manihot esculenta
Manes.14G025500 Manihot esculenta
MBI18_g19082_MAGBIO Magnolia biondii
MCO09G178 Micromonas commoda
MD03G1280800 Malus domestica
MD05G1098700 Malus domestica
MD06G1079100 Malus domestica
MD14G1102200 Malus domestica
Medtr1569s0010 Medicago truncatula
Medtr3g035130 Medicago truncatula
MELO3C005498.2 Cucumis melo
MELO3C005663.2 Cucumis melo
Migut.F00334 Erythranthe guttata
MSTRG.27113 Avicennia marina
Nitab4.5_0000080g0080 Nicotiana tabacum
Nitab4.5_0001842g0060 Nicotiana tabacum
Nitab4.5_0001951g0090 Nicotiana tabacum
Nitab4.5_0002394g0060 Nicotiana tabacum
Nn1g01484 Nelumbo nucifera
Nn6g33481 Nelumbo nucifera
Nn8g39295 Nelumbo nucifera
Oeu002961.1 Olea europaea
Oeu002962.1 Olea europaea
Oeu022593.1 Olea europaea
Oeu056262.2 Olea europaea
Os04g0683700 Oryza sativa ssp. japonica
Peaxi162Scf00444g00836 Petunia axillaris
Peaxi162Scf01969g00022 Petunia axillaris
PGR042G3134 Punica granatum
PGSC0003DMG400014345 Solanum tuberosum
PGSC0003DMG400029915 Solanum tuberosum
Phvul.004G114600 Phaseolus vulgaris
Phvul.006G079500 Phaseolus vulgaris
Phvul.007G071000 Phaseolus vulgaris
Phvul.010G075301 Phaseolus vulgaris
Potri.001G105900 Populus trichocarpa
Potri.015G144700 Populus trichocarpa
Pp3c1_9620 Physcomitrium patens
Pp3c24_4490 Physcomitrium patens
Pp3c3_24370 Physcomitrium patens
Prupe.5G097700 Prunus persica
Psat0s2062g0040 Pisum sativum
PSO478G4025 Papaver somniferum
PSO782G4963 Papaver somniferum
QL09p013995 Quercus lobata
QL12p033727 Quercus lobata
RcHm_v2.0_Chr7g0198211 Rosa chinensis
Rhsim08G0184000 Rhododendron simsii
Sabra01G0080200 Salix brachista
SalBow4G0135 Salvia bowleyana
SalBow4G1348 Salvia bowleyana
Sc13g0008750 Simmondsia chinensis
Sed0004240 Sechium edule
Sed0004975 Sechium edule
SEGI_19305 Sequoiadendron giganteum
SEGI_29686 Sequoiadendron giganteum
SEGI_37772 Sequoiadendron giganteum
SEGI_38524 Sequoiadendron giganteum
SGA_v2.0_scaffold60G21048 Striga asiatica
SHI07112 Sapria himalayana
SMO118G0296 Selaginella moellendorffii
SMO147G0188 Selaginella moellendorffii
SMO147G0232 Selaginella moellendorffii
SMO347G0351 Selaginella moellendorffii
SMO347G0360 Selaginella moellendorffii
Solyc03g025720.3 Solanum lycopersicum
Solyc06g035960.3 Solanum lycopersicum
Sopen03g004540 Solanum pennellii
Sopen06g011740 Solanum pennellii
Sp5g13060 Schrenkiella parvula
TAR374G0096 Trochodendron aralioides
TAR375G0986 Trochodendron aralioides
THA.LOC104808461 Tarenaya hassleriana
Thecc.03G177800 Theobroma cacao
Thecc.03G177900 Theobroma cacao
Thecc.03G276900 Theobroma cacao
Thhalv10010297m.g Eutrema salsugineum
TPR.G8165 Trifolium pratense
TWI14G0725 Tripterygium wilfordii
TWI23G0509 Tripterygium wilfordii
unitig_0.g2474 Utricularia gibba
unitig_52.g17741 Utricularia gibba
unitig_52.g17742 Utricularia gibba
vmacro06671 Vaccinium macrocarpon
VMungo0464G1551 Vigna mungo
VMungo0540G2085 Vigna mungo
VMungo0720G2642 Vigna mungo
Zm00001eb365520 Zea mays
Zm00001eb434030 Zea mays

User provided reference genes

Program Settings