Gene: Sopen03g004540

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g004540
  • Transcript Identifier Sopen03g004540.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 3317327-3320670 : positive

Gene Family Information

  • ID HOM05D000169
  • #Genes/#Species 2209/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g004540.1

Descriptions

  • Description AMP-dependent synthetase and ligase family protein | FUNCTIONS IN: catalytic activity, AMP binding | INVOLVED IN: response to cadmium ion | LOCATED IN: apoplast, chloroplast | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site , AMP-dependent synthetase/ligase | BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010030
ISO
PLAZA Integrative Orthologypositive regulation of seed germination AT3G48990
GO:0010214
ISO
PLAZA Integrative Orthologyseed coat development AT3G48990
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT3G48990
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT3G48990
GO:0033611
ISO
PLAZA Integrative Orthologyoxalate catabolic process AT3G48990

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050203
ISO
PLAZA Integrative Orthologyoxalate-CoA ligase activity AT3G48990

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G48990
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G48990
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G48990
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G48990
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT3G48990

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000873 AMP-dependent synthetase/ligase
IPR042099 ANL, N-terminal domain
IPR025110 AMP-binding enzyme, C-terminal domain
Mapman id Description
35.1 not assigned.annotated