Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p29560 Brassica napus
A09p07850 Brassica napus
Aa31LG11G890 Aethionema arabicum
Aa31LG11G900 Aethionema arabicum
Aa31sc1732G10 Aethionema arabicum
Aa31sc1732G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1199 Anthoceros agrestis
Actinidia19319 Actinidia chinensis
Actinidia33067 Actinidia chinensis
Ah.11g051630 Amaranthus hybridus
AL8G39750 Arabidopsis lyrata
Aqoxy3G02948 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2KV8GB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5ZTX8H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9FL7A6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NJJ8BU Arachis hypogaea
AT5G62790 Arabidopsis thaliana
ATR0730G147 Amborella trichopoda
Atru.chr9.2476 Acer truncatum
AUR62008212 Chenopodium quinoa
AUR62030965 Chenopodium quinoa
BcaB02g09693 Brassica carinata
BcaC01g02522 Brassica carinata
BcaC04g23393 Brassica carinata
BcaNung01381 Brassica carinata
BolC3t18648H Brassica oleracea
BolC9t53797H Brassica oleracea
BraA06t25902Z Brassica rapa
BraA09t36436Z Brassica rapa
C03p63940 Brassica napus
C09p08850 Brassica napus
CAN.G781.11 Capsicum annuum
CANSAT80G1130 Cannabis sativa
CANSAT80G1364 Cannabis sativa
CARHR276570 Cardamine hirsuta
Carub.0008s2351 Capsella rubella
Ca_21917_v3 Cicer arietinum L.
Ca_23215_v3 Cicer arietinum L.
CBR_g11924 Chara braunii
Cc00_g09880 Coffea canephora
Cc00_g09910 Coffea canephora
Cc04_g14010 Coffea canephora
Cc04_g14070 Coffea canephora
CDE06G1773 Ceratophyllum demersum
CDE07G0194 Ceratophyllum demersum
Cfa019131 Carpinus fangiana
Ciclev10019836m.g Citrus clementina
Ciclev10020004m.g Citrus clementina
CiPaw.11G026400 Carya illinoinensis
ClCG06G017010 Citrullus lanatus
COL.COLO4_30036 Corchorus olitorius
Cpa.g.sc76.64 Carica papaya
Cre12.g546050 Chlamydomonas reinhardtii
CsaV3_1G001500 Cucumis sativus L.
CSS0007150 Camellia sinensis var. sinensis
CSS0042870 Camellia sinensis var. sinensis
CSS0042990 Camellia sinensis var. sinensis
CSS0045852 Camellia sinensis var. sinensis
CSS0047950 Camellia sinensis var. sinensis
DCAR_026133 Daucus carota
Dinv02897 Davidia involucrata
Dinv20656 Davidia involucrata
Duzib068G0560 Durio zibethinus
Duzib205G1198 Durio zibethinus
ECA232G0993 Erigeron canadensis
Eucgr.B00316 Eucalyptus grandis
FAN04G2056 Fragaria x ananassa
FAN08G0480 Fragaria x ananassa
FAN09G3822 Fragaria x ananassa
FAN13G0153 Fragaria x ananassa
FAN18G3061 Fragaria x ananassa
FAN18G3775 Fragaria x ananassa
FvH4_1g09716 Fragaria vesca
FvH4_1g09717 Fragaria vesca
FvH4_3g27741 Fragaria vesca
FvH4_4g01210 Fragaria vesca
FvH4_5g05300 Fragaria vesca
Glyma.05G037500 Glycine max
Glyma.16G089000 Glycine max
Glyma.17G089600 Glycine max
Gohir.A09G171800 Gossypium hirsutum
Gohir.A11G001200 Gossypium hirsutum
Gohir.D09G167500 Gossypium hirsutum
Gohir.D11G000766 Gossypium hirsutum
Gohir.D11G000832 Gossypium hirsutum
Gorai.006G189200 Gossypium raimondii
Gorai.007G001700 Gossypium raimondii
GSVIVG01007752001 Vitis vinifera
HanXRQChr05g0153451 Helianthus annuus
HanXRQChr05g0156211 Helianthus annuus
HanXRQChr09g0272201 Helianthus annuus
HanXRQChr16g0517311 Helianthus annuus
Haze_07469 Corylus avellana
Hma1.2p1_0549F.1_g176800 Hydrangea macrophylla
HPP92_004862 Vanilla planifolia
Hund02742 Selenicereus undatus
Hund09436 Selenicereus undatus
Hund09437 Selenicereus undatus
Lalb_Chr07g0182731 Lupinus albus
Lalb_Chr12g0201571 Lupinus albus
Lalb_Chr12g0209981 Lupinus albus
Lalb_Chr13g0297811 Lupinus albus
Lj3g0025861 Lotus japonicus
Lj4g0012807 Lotus japonicus
Lj5A124T67 Lonicera japonica
Lj9A449G48 Lonicera japonica
Lsat_1_v5_gn_0_46101 Lactuca sativa
Lsat_1_v5_gn_4_75261 Lactuca sativa
Lsat_1_v5_gn_5_14440 Lactuca sativa
Manes.06G104700 Manihot esculenta
Manes.14G065900 Manihot esculenta
Mapoly0034s0078 Marchantia polymorpha
Mapoly0064s0074 Marchantia polymorpha
MBI10_g14554_MAGBIO Magnolia biondii
MBI10_g41914_MAGBIO Magnolia biondii
MBI16_g32207_MAGBIO Magnolia biondii
MCO15G646 Micromonas commoda
MD06G1174000 Malus domestica
MD14G1180500 Malus domestica
Medtr4g106870 Medicago truncatula
Medtr8g012565 Medicago truncatula
MELO3C026292.2 Cucumis melo
Migut.I00013 Erythranthe guttata
Migut.I00014 Erythranthe guttata
MSTRG.11450 Avicennia marina
MSTRG.23128 Avicennia marina
Nitab4.5_0007719g0010 Nicotiana tabacum
Nitab4.5_0009783g0020 Nicotiana tabacum
Nn4g22770 Nelumbo nucifera
Oeu035988.1 Olea europaea
Oeu040829.1 Olea europaea
Os01g0106900 Oryza sativa ssp. japonica
Peaxi162Scf00017g02915 Petunia axillaris
PGR083G1520 Punica granatum
PGSC0003DMG400024503 Solanum tuberosum
Phvul.003G200300 Phaseolus vulgaris
Phvul.010G023000 Phaseolus vulgaris
Potri.012G080900 Populus trichocarpa
Potri.015G076200 Populus trichocarpa
Pp3c24_8730 Physcomitrium patens
Pp3c8_12290 Physcomitrium patens
PRCOL_00002139 Prasinoderma coloniale
Prupe.5G174000 Prunus persica
Psat4g058000 Pisum sativum
Psat4g204400 Pisum sativum
PSO170G5081 Papaver somniferum
PSO455G0039 Papaver somniferum
QL10p011706 Quercus lobata
RcHm_v2.0_Chr1g0360281 Rosa chinensis
RcHm_v2.0_Chr2g0151191 Rosa chinensis
RcHm_v2.0_Chr3g0495271 Rosa chinensis
RcHm_v2.0_Chr7g0193571 Rosa chinensis
Rhsim08G0171900 Rhododendron simsii
Sabra12G0057700 Salix brachista
Sabra15G0101400 Salix brachista
SalBow5G0347 Salvia bowleyana
SalBow5G5681 Salvia bowleyana
Sc12g0005330 Simmondsia chinensis
Sc12g0005340 Simmondsia chinensis
Sed0001158 Sechium edule
Sed0011107 Sechium edule
SEGI_37686 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10843 Striga asiatica
SGA_v2.0_scaffold90G27940 Striga asiatica
SMO348G0015 Selaginella moellendorffii
Solyc03g114340.3 Solanum lycopersicum
Sopen03g033440 Solanum pennellii
Sp2g25950 Schrenkiella parvula
TAR622G0131 Trochodendron aralioides
TAR629G0089 Trochodendron aralioides
THA.LOC104818235 Tarenaya hassleriana
Thecc.03G012400 Theobroma cacao
Thhalv10004122m.g Eutrema salsugineum
TPR.G31563 Trifolium pratense
TPR.G37486 Trifolium pratense
TWI14G0558 Tripterygium wilfordii
unitig_0.g1445 Utricularia gibba
vmacro19385 Vaccinium macrocarpon
VMungo0331G0859 Vigna mungo
VMungo0647G0692 Vigna mungo
VMungo1215G2328 Vigna mungo
Zm00001eb126690 Zea mays
Zm00001eb334370 Zea mays
Zm00001eb334380 Zea mays

User provided reference genes

Program Settings