Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p29510 Brassica napus
A07p40050 Brassica napus
A10p28600 Brassica napus
Aa31LG3G18500 Aethionema arabicum
Aa31LG4G4500 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2393 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3043 Anthoceros agrestis
Actinidia04820 Actinidia chinensis
Actinidia04821 Actinidia chinensis
Actinidia18988 Actinidia chinensis
Ah.11g047690 Amaranthus hybridus
AL2G34090 Arabidopsis lyrata
AL6G18380 Arabidopsis lyrata
Aqoxy3G03682 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.32Y4H5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LS3LRU Arachis hypogaea
AT1G74210 Arabidopsis thaliana
AT5G08030 Arabidopsis thaliana
ATR0177G011 Amborella trichopoda
ATR0177G049 Amborella trichopoda
ATR0177G055 Amborella trichopoda
Atru.chr9.563 Acer truncatum
AUR62000729 Chenopodium quinoa
AUR62008543 Chenopodium quinoa
AUR62008545 Chenopodium quinoa
AUR62021548 Chenopodium quinoa
AUR62021550 Chenopodium quinoa
BcaB08g37296 Brassica carinata
BcaB08g37299 Brassica carinata
BcaC05g24570 Brassica carinata
BcaC05g24571 Brassica carinata
BcaC08g45601 Brassica carinata
BcaC08g46853 Brassica carinata
BolC6t38464H Brassica oleracea
BolC6t38466H Brassica oleracea
BolC6t38468H Brassica oleracea
BolC6t39869H Brassica oleracea
BolC9t59635H Brassica oleracea
BraA07t30589Z Brassica rapa
BraA07t30590Z Brassica rapa
BraA07t31549Z Brassica rapa
BraA10t44909Z Brassica rapa
C06p33500 Brassica napus
C06p33530 Brassica napus
C06p33560 Brassica napus
C06p48400 Brassica napus
C09p68890 Brassica napus
CAN.G587.46 Capsicum annuum
CANSAT80G0358 Cannabis sativa
CARHR067470 Cardamine hirsuta
CARHR205150 Cardamine hirsuta
Carub.0002s2100 Capsella rubella
Carub.0006s0692 Capsella rubella
Ca_21767_v3 Cicer arietinum L.
Cc00_g07650 Coffea canephora
Cc03_g09430 Coffea canephora
Cc11_g03870 Coffea canephora
CDE04G2471 Ceratophyllum demersum
Ciclev10020540m.g Citrus clementina
CiPaw.05G124700 Carya illinoinensis
CiPaw.11G054200 Carya illinoinensis
ClCG04G011770 Citrullus lanatus
COL.COLO4_06850 Corchorus olitorius
COL.COLO4_27876 Corchorus olitorius
Cpa.g.c38432 Carica papaya
Cpa.g.sc1086.2 Carica papaya
Cre03.g183650 Chlamydomonas reinhardtii
Cre16.g683850 Chlamydomonas reinhardtii
Cre16.g683900 Chlamydomonas reinhardtii
Cre17.g699850 Chlamydomonas reinhardtii
CsaV3_1G006010 Cucumis sativus L.
CSS0001555 Camellia sinensis var. sinensis
CSS0004093 Camellia sinensis var. sinensis
CSS0018238 Camellia sinensis var. sinensis
CSS0048536 Camellia sinensis var. sinensis
DCAR_011566 Daucus carota
DCAR_011567 Daucus carota
Dinv17421 Davidia involucrata
Dinv22774 Davidia involucrata
Duzib068G0186 Durio zibethinus
Duzib084G0602 Durio zibethinus
ECA246G0136 Erigeron canadensis
EL10Ac5g11140 Beta vulgaris
EL10Ac5g11142 Beta vulgaris
Eucgr.B00600 Eucalyptus grandis
Eucgr.B00602 Eucalyptus grandis
Eucgr.G02445 Eucalyptus grandis
FAN08G2806 Fragaria x ananassa
FAN13G0676 Fragaria x ananassa
FAN18G2171 Fragaria x ananassa
FvH4_5g13770 Fragaria vesca
Glyma.05G020500 Glycine max
Glyma.17G078900 Glycine max
Gohir.A07G068200 Gossypium hirsutum
Gohir.D07G072700 Gossypium hirsutum
Gorai.001G076900 Gossypium raimondii
GSVIVG01007848001 Vitis vinifera
HanXRQChr17g0550211 Helianthus annuus
Haze_07735 Corylus avellana
Haze_11901 Corylus avellana
Hma1.2p1_0060F.1_g033040 Hydrangea macrophylla
HPP92_014049 Vanilla planifolia
HPP92_019469 Vanilla planifolia
Hund02578 Selenicereus undatus
Hund02579 Selenicereus undatus
Lalb_Chr07g0178321 Lupinus albus
Lalb_Chr13g0302821 Lupinus albus
Lj4g0013109 Lotus japonicus
Lj5C102G6 Lonicera japonica
Lsat_1_v5_gn_2_74281 Lactuca sativa
Lsat_1_v5_gn_5_22440 Lactuca sativa
Lsat_1_v5_gn_8_115941 Lactuca sativa
Manes.06G084100 Manihot esculenta
Manes.14G086100 Manihot esculenta
Mapoly0019s0036 Marchantia polymorpha
MBI19_g36959_MAGBIO Magnolia biondii
MD06G1225600 Malus domestica
MD14G1212500 Malus domestica
Medtr4g109600 Medicago truncatula
MELO3C002033.2 Cucumis melo
Migut.N00800 Erythranthe guttata
MSTRG.11336 Avicennia marina
Nitab4.5_0001328g0050 Nicotiana tabacum
Nitab4.5_0007019g0010 Nicotiana tabacum
Nn3g17460 Nelumbo nucifera
Nn4g23438 Nelumbo nucifera
Oeu014414.1 Olea europaea
Os01g0763600 Oryza sativa ssp. japonica
Os03g0603600 Oryza sativa ssp. japonica
Os07g0602800 Oryza sativa ssp. japonica
Peaxi162Scf00013g00645 Petunia axillaris
PGR083G0437 Punica granatum
PGR119G0085 Punica granatum
PGSC0003DMG400004067 Solanum tuberosum
Phvul.003G184300 Phaseolus vulgaris
Potri.015G058400 Populus trichocarpa
Pp3c11_24160 Physcomitrium patens
Prupe.5G205800 Prunus persica
Psat4g047720 Pisum sativum
PSO017G5082 Papaver somniferum
PSO371G0001 Papaver somniferum
PSO675G9333 Papaver somniferum
QL03p074068 Quercus lobata
QL03p074386 Quercus lobata
QL05p066163 Quercus lobata
QL05p080532 Quercus lobata
QL10p019706 Quercus lobata
QL10p019730 Quercus lobata
RcHm_v2.0_Chr7g0183171 Rosa chinensis
Rhsim08G0145400 Rhododendron simsii
Rhsim12G0148700 Rhododendron simsii
Sabra15G0084000 Salix brachista
SalBow5G2710 Salvia bowleyana
Sc04g0004370 Simmondsia chinensis
Sed0001151 Sechium edule
SEGI_06758 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10954 Striga asiatica
SGA_v2.0_scaffold28G11744 Striga asiatica
SHI27088 Sapria himalayana
SMO347G0630 Selaginella moellendorffii
SMO348G0087 Selaginella moellendorffii
SMO351G0244 Selaginella moellendorffii
SMO356G0402 Selaginella moellendorffii
Solyc06g069470.3 Solanum lycopersicum
Sopen06g026760 Solanum pennellii
Sp5g29390 Schrenkiella parvula
Sp6g34910 Schrenkiella parvula
TAR374G1165 Trochodendron aralioides
TAR622G1281 Trochodendron aralioides
THA.LOC104812108 Tarenaya hassleriana
THA.LOC104818348 Tarenaya hassleriana
Thecc.02G329800 Theobroma cacao
Thecc.03G102600 Theobroma cacao
Thhalv10013858m.g Eutrema salsugineum
Thhalv10018684m.g Eutrema salsugineum
TPR.G2011 Trifolium pratense
TWI15G0383 Tripterygium wilfordii
unitig_62.g23556 Utricularia gibba
unitig_749.g13430 Utricularia gibba
vmacro16492 Vaccinium macrocarpon
vmacro17613 Vaccinium macrocarpon
VMungo1215G3378 Vigna mungo
Zm00001eb050070 Zea mays
Zm00001eb326890 Zea mays
Zm00001eb370370 Zea mays

User provided reference genes

Program Settings