Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p26730 Brassica napus
A04p20650 Brassica napus
Aa31LG5G8590 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2784 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.640 Anthoceros agrestis
Actinidia06352 Actinidia chinensis
Actinidia22465 Actinidia chinensis
Ah.08g222470 Amaranthus hybridus
AL4G20920 Arabidopsis lyrata
Aqoxy2G02431 Aquilegia oxysepala
Aqoxy7G01992 Aquilegia oxysepala
Aqoxy7G02002 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.08YFHJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.10ENSP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.65YTHF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.84ELHW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F3E4YP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HKS14U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HU1B6R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KL7BWI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PDK0NA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z8K404 Arachis hypogaea
AT2G27170 Arabidopsis thaliana
ATR0618G336 Amborella trichopoda
ATR0618G390 Amborella trichopoda
Atru.chr3.3038 Acer truncatum
AUR62001588 Chenopodium quinoa
AUR62020192 Chenopodium quinoa
BcaB01g03052 Brassica carinata
BcaB06g28118 Brassica carinata
BcaC01g04925 Brassica carinata
BcaC02g08276 Brassica carinata
BolC3t15547H Brassica oleracea
BolC4t27174H Brassica oleracea
BraA03t11884Z Brassica rapa
BraA04t17638Z Brassica rapa
C03p32030 Brassica napus
C04p56430 Brassica napus
CAN.G2071.2 Capsicum annuum
CAN.G2071.3 Capsicum annuum
CAN.G65.229 Capsicum annuum
CAN.G65.230 Capsicum annuum
CANSAT54G1723 Cannabis sativa
CARHR119550 Cardamine hirsuta
CARHR119560 Cardamine hirsuta
Carub.0004s0770 Capsella rubella
Ca_06129_v3 Cicer arietinum L.
CBR_g39805 Chara braunii
CBR_g39806 Chara braunii
Cc01_g08340 Coffea canephora
Cc01_g08350 Coffea canephora
CDE06G2316 Ceratophyllum demersum
Cfa023768 Carpinus fangiana
Ciclev10027700m.g Citrus clementina
CiPaw.13G125200 Carya illinoinensis
ClCG02G024050 Citrullus lanatus
COL.COLO4_25352 Corchorus olitorius
Cpa.g.sc103.56 Carica papaya
Cpa.g.sc103.58 Carica papaya
Cre10.g445650 Chlamydomonas reinhardtii
CsaV3_4G023280 Cucumis sativus L.
CSS0028100 Camellia sinensis var. sinensis
DCAR_022907 Daucus carota
Dinv32833 Davidia involucrata
Duzib170G1043 Durio zibethinus
ECA238G1454 Erigeron canadensis
EL10Ac7g16251 Beta vulgaris
Eucgr.J00601 Eucalyptus grandis
FAN04G2246 Fragaria x ananassa
FAN08G3150 Fragaria x ananassa
FAN13G1182 Fragaria x ananassa
FAN18G2517 Fragaria x ananassa
FAN18G4241 Fragaria x ananassa
FvH4_5g11061 Fragaria vesca
Glyma.02G271900 Glycine max
Glyma.14G044900 Glycine max
Gohir.A05G076900 Gossypium hirsutum
Gohir.D05G079700 Gossypium hirsutum
Gorai.009G081300 Gossypium raimondii
GSVIVG01033181001 Vitis vinifera
HanXRQChr02g0040041 Helianthus annuus
HanXRQChr04g0102561 Helianthus annuus
HanXRQChr04g0117511 Helianthus annuus
HanXRQChr05g0143751 Helianthus annuus
HanXRQChr06g0181531 Helianthus annuus
HanXRQChr06g0181541 Helianthus annuus
Haze_23622 Corylus avellana
Haze_27142 Corylus avellana
Hma1.2p1_0218F.1_g092340 Hydrangea macrophylla
HPP92_021489 Vanilla planifolia
HPP92_021530 Vanilla planifolia
Hund18817 Selenicereus undatus
Lalb_Chr04g0249821 Lupinus albus
Lalb_Chr04g0249831 Lupinus albus
Lj2A849G10 Lonicera japonica
Lj2A849T12 Lonicera japonica
Lj2A851G15 Lonicera japonica
Lj2A868G26 Lonicera japonica
Lj2A868T26 Lonicera japonica
Lj2A874G36 Lonicera japonica
Lj2C849G3 Lonicera japonica
Lj2C853G1 Lonicera japonica
Lj2C854G2 Lonicera japonica
Lj2C854G3 Lonicera japonica
Lj2C868T4 Lonicera japonica
Lj2C873G2 Lonicera japonica
Lj2C873T5 Lonicera japonica
Lj2C874G5 Lonicera japonica
LjContig00564g0013149 Lotus japonicus
LjContig00564g0017285 Lotus japonicus
Lsat_1_v5_gn_2_27520 Lactuca sativa
Lsat_1_v5_gn_2_27661 Lactuca sativa
Lsat_1_v5_gn_6_106240 Lactuca sativa
Lsat_1_v5_gn_6_60940 Lactuca sativa
Manes.06G005500 Manihot esculenta
Mapoly0048s0100 Marchantia polymorpha
MBI05_g07506_MAGBIO Magnolia biondii
MCO04G096 Micromonas commoda
MD03G1161700 Malus domestica
MD11G1177700 Malus domestica
Medtr1g051825 Medicago truncatula
Medtr3g110055 Medicago truncatula
Medtr3g110058 Medicago truncatula
Medtr5g086975 Medicago truncatula
Medtr5g087290 Medicago truncatula
MELO3C014687.2 Cucumis melo
Migut.N02425 Erythranthe guttata
Migut.N02426 Erythranthe guttata
Nitab4.5_0000200g0070 Nicotiana tabacum
Nitab4.5_0000271g0010 Nicotiana tabacum
Nitab4.5_0003359g0030 Nicotiana tabacum
Nitab4.5_0007575g0030 Nicotiana tabacum
Nitab4.5_0007575g0040 Nicotiana tabacum
Nn2g11908 Nelumbo nucifera
Oeu058179.1 Olea europaea
Os02g0133300 Oryza sativa ssp. japonica
Os02g0133400 Oryza sativa ssp. japonica
Peaxi162Scf00046g00526 Petunia axillaris
Peaxi162Scf00046g00527 Petunia axillaris
Peaxi162Scf00046g00529 Petunia axillaris
Peaxi162Scf00355g00113 Petunia axillaris
PGR119G0283 Punica granatum
PGSC0003DMG400005912 Solanum tuberosum
Phvul.009G196800 Phaseolus vulgaris
Potri.009G154550 Populus trichocarpa
Potri.009G155200 Populus trichocarpa
Pp3c24_13420 Physcomitrium patens
Pp3c8_19660 Physcomitrium patens
PRCOL_00007015 Prasinoderma coloniale
Prupe.6G149900 Prunus persica
Psat2g023680 Pisum sativum
PSO017G3356 Papaver somniferum
PSO170G6842 Papaver somniferum
RcHm_v2.0_Chr1g0362081 Rosa chinensis
RcHm_v2.0_Chr3g0479821 Rosa chinensis
RcHm_v2.0_Chr7g0186721 Rosa chinensis
RcHm_v2.0_Chr7g0186731 Rosa chinensis
Rhsim01G0197900 Rhododendron simsii
Sabra09G0121700 Salix brachista
SalBow3G2138 Salvia bowleyana
Sc12g0000470 Simmondsia chinensis
Sed0007253 Sechium edule
SEGI_13021 Sequoiadendron giganteum
SGA_v2.0_scaffold79G25491 Striga asiatica
SHI24016 Sapria himalayana
SHI25312 Sapria himalayana
Solyc06g073780.4 Solanum lycopersicum
Sopen06g030170 Solanum pennellii
Sopen06g030180 Solanum pennellii
Sp4g09970 Schrenkiella parvula
TAR636G3505 Trochodendron aralioides
THA.LOC104800499 Tarenaya hassleriana
Thecc.09G266900 Theobroma cacao
Thhalv10001887m.g Eutrema salsugineum
Thhalv10023124m.g Eutrema salsugineum
TPR.G1242 Trifolium pratense
TPR.G1293 Trifolium pratense
TPR.G13306 Trifolium pratense
TPR.G13308 Trifolium pratense
TWI75G0107 Tripterygium wilfordii
unitig_27.g25128 Utricularia gibba
unitig_27.g25129 Utricularia gibba
vmacro21588 Vaccinium macrocarpon
VMungo1309G0720 Vigna mungo
VMungo1309G0828 Vigna mungo
Zm00001eb297550 Zea mays

User provided reference genes

Program Settings