Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p31000 Brassica napus
A09p08630 Brassica napus
Aa31LG1G17570 Aethionema arabicum
Actinidia00293 Actinidia chinensis
Actinidia01165 Actinidia chinensis
Actinidia04401 Actinidia chinensis
Actinidia24013 Actinidia chinensis
Actinidia24014 Actinidia chinensis
Ah.01g007500 Amaranthus hybridus
Ah.01g024040 Amaranthus hybridus
AL8G41690 Arabidopsis lyrata
Aqoxy6G01465 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4T09L2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5Y2C3U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PKZ6FU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XK1BEG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZKJP05 Arachis hypogaea
AT5G64330 Arabidopsis thaliana
ATR0022G045 Amborella trichopoda
Atru.chr6.1227 Acer truncatum
AUR62012898 Chenopodium quinoa
AUR62027122 Chenopodium quinoa
BcaB04g19967 Brassica carinata
BcaC01g06906 Brassica carinata
BcaC04g23322 Brassica carinata
BolC3t18455H Brassica oleracea
BolC9t53885H Brassica oleracea
BraA06t26042Z Brassica rapa
BraA09t36512Z Brassica rapa
C03p61960 Brassica napus
C09p09740 Brassica napus
CAN.G1861.3 Capsicum annuum
CAN.G523.30 Capsicum annuum
CANSAT11G0467 Cannabis sativa
CARHR278260 Cardamine hirsuta
Carub.0008s2512 Capsella rubella
Ca_00155_v3 Cicer arietinum L.
Ca_18371_v3 Cicer arietinum L.
Cc02_g21030 Coffea canephora
CDE10G0408 Ceratophyllum demersum
CDE10G0964 Ceratophyllum demersum
Cfa005694 Carpinus fangiana
Ciclev10004479m.g Citrus clementina
CiPaw.05G031300 Carya illinoinensis
CiPaw.06G156700 Carya illinoinensis
ClCG09G015920 Citrullus lanatus
ClCG10G009530 Citrullus lanatus
COL.COLO4_32355 Corchorus olitorius
Cpa.g.sc1175.2 Carica papaya
CsaV3_4G009650 Cucumis sativus L.
CsaV3_7G007040 Cucumis sativus L.
CSS0012256 Camellia sinensis var. sinensis
CSS0013813 Camellia sinensis var. sinensis
CSS0034940 Camellia sinensis var. sinensis
CSS0047297 Camellia sinensis var. sinensis
DCAR_021887 Daucus carota
DCAR_029190 Daucus carota
Dinv15986 Davidia involucrata
Dinv24161 Davidia involucrata
Duzib132G1054 Durio zibethinus
Duzib248G0007 Durio zibethinus
ECA234G1085 Erigeron canadensis
ECA236G2139 Erigeron canadensis
EL10Ac9g22087 Beta vulgaris
Eucgr.G00960 Eucalyptus grandis
FAN04G2272 Fragaria x ananassa
FAN08G3536 Fragaria x ananassa
FAN13G2241 Fragaria x ananassa
FAN18G3787 Fragaria x ananassa
FvH4_5g25720 Fragaria vesca
Glyma.07G180900 Glycine max
Glyma.08G069800 Glycine max
Glyma.13G258700 Glycine max
Glyma.13G368300 Glycine max
Glyma.15G056500 Glycine max
Gohir.A03G175800 Gossypium hirsutum
Gohir.A13G070500 Gossypium hirsutum
Gohir.D02G199600 Gossypium hirsutum
Gohir.D13G051200 Gossypium hirsutum
Gorai.005G224200 Gossypium raimondii
Gorai.013G057300 Gossypium raimondii
GSVIVG01012508001 Vitis vinifera
HanXRQChr11g0333371 Helianthus annuus
Haze_10555 Corylus avellana
Hma1.2p1_1093F.1_g256080 Hydrangea macrophylla
HPP92_005971 Vanilla planifolia
HPP92_005973 Vanilla planifolia
HPP92_005978 Vanilla planifolia
HPP92_005980 Vanilla planifolia
Hund06155 Selenicereus undatus
Lalb_Chr15g0090351 Lupinus albus
Lalb_Chr18g0060461 Lupinus albus
Lalb_Chr20g0122871 Lupinus albus
Lj4g0014549 Lotus japonicus
Lj5A232T95 Lonicera japonica
Lj6g0005625 Lotus japonicus
Lj9A348T68 Lonicera japonica
Lsat_1_v5_gn_5_109081 Lactuca sativa
Lsat_1_v5_gn_7_83740 Lactuca sativa
Manes.01G220601 Manihot esculenta
Manes.06G033836 Manihot esculenta
Manes.07G037100 Manihot esculenta
Manes.10G102200 Manihot esculenta
Mapoly0182s0022 Marchantia polymorpha
MBI06_g42715_MAGBIO Magnolia biondii
MD05G1047100 Malus domestica
MD10G1053800 Malus domestica
Medtr2g009340 Medicago truncatula
Medtr4g093850 Medicago truncatula
MELO3C018590.2 Cucumis melo
MELO3C024837.2 Cucumis melo
Migut.B00566 Erythranthe guttata
Migut.N01090 Erythranthe guttata
MSTRG.16608 Avicennia marina
MSTRG.27811 Avicennia marina
Nitab4.5_0000313g0110 Nicotiana tabacum
Nitab4.5_0001264g0150 Nicotiana tabacum
Nitab4.5_0002650g0080 Nicotiana tabacum
Nitab4.5_0008998g0040 Nicotiana tabacum
Nn1g05501 Nelumbo nucifera
Nn5g29942 Nelumbo nucifera
Oeu022085.1 Olea europaea
Os02g0568200 Oryza sativa ssp. japonica
Peaxi162Scf00003g03341 Petunia axillaris
Peaxi162Scf00299g00849 Petunia axillaris
PGR042G2747 Punica granatum
PGSC0003DMG400002400 Solanum tuberosum
PGSC0003DMG400033569 Solanum tuberosum
Phvul.002G211400 Phaseolus vulgaris
Phvul.006G203600 Phaseolus vulgaris
Potri.007G112600 Populus trichocarpa
Potri.017G048200 Populus trichocarpa
Pp3c15_21210 Physcomitrium patens
Pp3c16_15610 Physcomitrium patens
Pp3c16_17420 Physcomitrium patens
Pp3c1_22440 Physcomitrium patens
Pp3c25_4520 Physcomitrium patens
Pp3c27_6760 Physcomitrium patens
Pp3c2_13990 Physcomitrium patens
Pp3c4_9940 Physcomitrium patens
Pp3c5_19090 Physcomitrium patens
Pp3c6_12160 Physcomitrium patens
Pp3c6_24130 Physcomitrium patens
Pp3c9_23280 Physcomitrium patens
Prupe.8G067500 Prunus persica
Psat1g214600 Pisum sativum
Psat7g100600 Pisum sativum
PSO170G4338 Papaver somniferum
PSO210G2717 Papaver somniferum
PSO541G1389 Papaver somniferum
PSO675G8640 Papaver somniferum
QL11p023808 Quercus lobata
RcHm_v2.0_Chr6g0271301 Rosa chinensis
RcHm_v2.0_Chr7g0216061 Rosa chinensis
RhsimUnG0008300 Rhododendron simsii
RhsimUnG0106100 Rhododendron simsii
Sabra07G0092000 Salix brachista
Sabra17G0032700 Salix brachista
Sabra17G0034000 Salix brachista
SalBow6G1523 Salvia bowleyana
SalBow8G5561 Salvia bowleyana
Sc14g0003430 Simmondsia chinensis
Sed0012910 Sechium edule
Sed0016365 Sechium edule
Sed0026147 Sechium edule
SEGI_19452 Sequoiadendron giganteum
SGA_v2.0_scaffold83G26349 Striga asiatica
SMO115G0136 Selaginella moellendorffii
SMO118G0176 Selaginella moellendorffii
Solyc01g105680.4 Solanum lycopersicum
Solyc10g047530.2 Solanum lycopersicum
Sopen01g048130 Solanum pennellii
Sopen10g017810 Solanum pennellii
Sp2g27390 Schrenkiella parvula
TAR381G1115 Trochodendron aralioides
TAR625G0011 Trochodendron aralioides
TAR628G1646 Trochodendron aralioides
THA.LOC104799835 Tarenaya hassleriana
Thecc.02G132200 Theobroma cacao
Thhalv10003710m.g Eutrema salsugineum
TPR.G2840 Trifolium pratense
TPR.G9484 Trifolium pratense
TWI23G0226 Tripterygium wilfordii
TWI59G0183 Tripterygium wilfordii
unitig_61.g26051 Utricularia gibba
vmacro01850 Vaccinium macrocarpon
VMungo0251G1806 Vigna mungo
VMungo0540G2352 Vigna mungo
Zm00001eb088780 Zea mays
Zm00001eb244600 Zea mays

User provided reference genes

Program Settings