Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p43030 Brassica napus
A06p30470 Brassica napus
A09p08430 Brassica napus
Aa31LG1G18040 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.657 Anthoceros agrestis
Actinidia06583 Actinidia chinensis
Actinidia20040 Actinidia chinensis
Ah.04g157800 Amaranthus hybridus
Ah.06g191130 Amaranthus hybridus
AL8G41090 Arabidopsis lyrata
Aqoxy6G00326 Aquilegia oxysepala
Aqoxy6G00329 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.56CBQX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F1F8UR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WN2TW1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XQ9TSC Arachis hypogaea
AT5G63860 Arabidopsis thaliana
ATR0584G009 Amborella trichopoda
Atru.chr4.1006 Acer truncatum
Atru.chr4.1007 Acer truncatum
AUR62000528 Chenopodium quinoa
AUR62006875 Chenopodium quinoa
AUR62038079 Chenopodium quinoa
BcaB02g09771 Brassica carinata
BcaB07g29708 Brassica carinata
BcaC01g02636 Brassica carinata
BcaC03g18228 Brassica carinata
BcaNung04634 Brassica carinata
BcaNung04639 Brassica carinata
BolC2t12371H Brassica oleracea
BolC3t18516H Brassica oleracea
BraA02t09225Z Brassica rapa
BraA06t25996Z Brassica rapa
BraA09t36493Z Brassica rapa
C02p62970 Brassica napus
C03p62590 Brassica napus
C09p09540 Brassica napus
CAN.G7.11 Capsicum annuum
CANSAT01G1256 Cannabis sativa
CARHR277760 Cardamine hirsuta
Carub.0008s2463 Capsella rubella
Ca_16987_v3 Cicer arietinum L.
Ca_17621_v3 Cicer arietinum L.
CBR_g41650 Chara braunii
CBR_g6400 Chara braunii
CBR_g766 Chara braunii
Cc07_g19320 Coffea canephora
CDE02G3989 Ceratophyllum demersum
CDE08G1310 Ceratophyllum demersum
Cfa002195 Carpinus fangiana
Ciclev10001136m.g Citrus clementina
CiPaw.03G117600 Carya illinoinensis
CiPaw.04G079000 Carya illinoinensis
ClCG04G001850 Citrullus lanatus
ClCG04G001880 Citrullus lanatus
COL.COLO4_12068 Corchorus olitorius
Cpa.g.sc37.14 Carica papaya
Cre05.g230600 Chlamydomonas reinhardtii
Cre08.g359200 Chlamydomonas reinhardtii
CsaV3_4G030770 Cucumis sativus L.
CSS0019051 Camellia sinensis var. sinensis
CSS0019719 Camellia sinensis var. sinensis
CSS0029875 Camellia sinensis var. sinensis
CSS0034191 Camellia sinensis var. sinensis
CSS0049437 Camellia sinensis var. sinensis
DCAR_009595 Daucus carota
DCAR_019990 Daucus carota
Dinv30350 Davidia involucrata
Duzib147G0323 Durio zibethinus
Duzib264G1077 Durio zibethinus
ECA234G0012 Erigeron canadensis
EL10Ac8g19816 Beta vulgaris
Eucgr.H05117 Eucalyptus grandis
FAN19G0294 Fragaria x ananassa
FAN23G2343 Fragaria x ananassa
FAN26G2393 Fragaria x ananassa
FAN28G2821 Fragaria x ananassa
FvH4_1g25000 Fragaria vesca
Glyma.04G209600 Glycine max
Glyma.05G194400 Glycine max
Glyma.06G156400 Glycine max
Glyma.08G002201 Glycine max
Gohir.A09G006600 Gossypium hirsutum
Gohir.A10G068120 Gossypium hirsutum
Gohir.D09G005800 Gossypium hirsutum
Gohir.D10G107800 Gossypium hirsutum
Gorai.006G007400 Gossypium raimondii
Gorai.011G118200 Gossypium raimondii
GSVIVG01022347001 Vitis vinifera
HanXRQChr10g0297801 Helianthus annuus
Haze_25368 Corylus avellana
Hma1.2p1_0935F.1_g238590 Hydrangea macrophylla
Hma1.2p1_0935F.1_g238595 Hydrangea macrophylla
Hma1.2p1_0935F.1_g238600 Hydrangea macrophylla
HPP92_005664 Vanilla planifolia
HPP92_006887 Vanilla planifolia
Hund07229 Selenicereus undatus
Lalb_Chr08g0238151 Lupinus albus
Lalb_Chr11g0068661 Lupinus albus
Lalb_Chr12g0203031 Lupinus albus
Lj1g0004532 Lotus japonicus
Lj2A423G50 Lonicera japonica
Lj2A617T13 Lonicera japonica
Lj4g0027354 Lotus japonicus
Lsat_1_v5_gn_5_146840 Lactuca sativa
Lsat_1_v5_gn_5_57421 Lactuca sativa
Manes.13G078300 Manihot esculenta
Mapoly0023s0125 Marchantia polymorpha
MBI03_g45146_MAGBIO Magnolia biondii
MBI03_g46673_MAGBIO Magnolia biondii
MCO01G496 Micromonas commoda
MCO04G013 Micromonas commoda
MCO04G015 Micromonas commoda
MCO04G188 Micromonas commoda
MCO10G108 Micromonas commoda
MCO13G466 Micromonas commoda
MCO15G103 Micromonas commoda
MCO16G021 Micromonas commoda
MD15G1136000 Malus domestica
MD15G1136100 Malus domestica
Medtr0095s0070 Medicago truncatula
Medtr0095s0120 Medicago truncatula
Medtr3g096780 Medicago truncatula
Medtr8g094410 Medicago truncatula
MELO3C008944.2 Cucumis melo
Migut.H00820 Erythranthe guttata
MSTRG.23492 Avicennia marina
MSTRG.2767 Avicennia marina
Nitab4.5_0000415g0020 Nicotiana tabacum
Nitab4.5_0000415g0030 Nicotiana tabacum
Nitab4.5_0005825g0010 Nicotiana tabacum
Nn1g08980 Nelumbo nucifera
Nn5g28428 Nelumbo nucifera
Oeu011025.1 Olea europaea
Oeu037861.2 Olea europaea
Oeu042323.1 Olea europaea
Os02g0554100 Oryza sativa ssp. japonica
Os04g0435700 Oryza sativa ssp. japonica
Peaxi162Scf00658g00515 Petunia axillaris
PGR102G2655 Punica granatum
PGR119G2502 Punica granatum
Phvul.002G274700 Phaseolus vulgaris
Phvul.009G153900 Phaseolus vulgaris
Potri.007G100200 Populus trichocarpa
Pp3c10_2230 Physcomitrium patens
Pp3c3_15300 Physcomitrium patens
PRCOL_00003069 Prasinoderma coloniale
PRCOL_00005776 Prasinoderma coloniale
Prupe.4G277200 Prunus persica
Psat5g059160 Pisum sativum
Psat7g044560 Pisum sativum
PSO017G3690 Papaver somniferum
PSO170G6467 Papaver somniferum
QL10p041044 Quercus lobata
RcHm_v2.0_Chr2g0122641 Rosa chinensis
Rhsim10G0127200 Rhododendron simsii
Sabra07G0083100 Salix brachista
Sabra18G0053000 Salix brachista
Sabra18G0053100 Salix brachista
Sabra18G0053200 Salix brachista
Sabra18G0053400 Salix brachista
Sabra18G0053700 Salix brachista
SalBow1G5355 Salvia bowleyana
Sc16g0009570 Simmondsia chinensis
Sed0023682 Sechium edule
SEGI_05648 Sequoiadendron giganteum
SEGI_29484 Sequoiadendron giganteum
SGA_v2.0_scaffold54G19614 Striga asiatica
SMO266G0099 Selaginella moellendorffii
SMO332G0036 Selaginella moellendorffii
SMO334G0011 Selaginella moellendorffii
SMO358G0353 Selaginella moellendorffii
Solyc05g018630.1 Solanum lycopersicum
Solyc05g018640.3 Solanum lycopersicum
Solyc05g150124.1 Solanum lycopersicum
Sopen05g015830 Solanum pennellii
Sp2g26920 Schrenkiella parvula
TAR625G1514 Trochodendron aralioides
TAR628G0304 Trochodendron aralioides
THA.LOC104804585 Tarenaya hassleriana
THA.LOC104819349 Tarenaya hassleriana
Thecc.01G139000 Theobroma cacao
Thhalv10004234m.g Eutrema salsugineum
TPR.G33573 Trifolium pratense
TPR.G37360 Trifolium pratense
TWI75G0993 Tripterygium wilfordii
TWI79G1269 Tripterygium wilfordii
unitig_899.g15152 Utricularia gibba
vmacro12752 Vaccinium macrocarpon
VMungo0251G3467 Vigna mungo
VMungo1309G1002 Vigna mungo
Zm00001eb082500 Zea mays

User provided reference genes

Program Settings