Gene: Sopen05g015830

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g015830
  • Transcript Identifier Sopen05g015830.2
  • Gene Type Coding gene
  • Location Spenn-ch05 : 28722334-28743123 : negative

Gene Family Information

  • ID HOM05D000189
  • #Genes/#Species 2040/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g015830.2

Descriptions

  • Description UV-B-specific signaling component that orchestrates expression of a range of genes with vital UV-protective functions. Located in the nucleus and the cytosol. Associates with chromatin via histones. UV-B light promotes URV8 protein accumulation in the nucleus. | UVB-RESISTANCE 8 (UVR8) | FUNCTIONS IN: chromatin binding, guanyl-nucleotide exchange factor activity | INVOLVED IN: response to UV, response to UV-B | LOCATED IN: cytosol, nucleus | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II , Regulator of chromosome condensation, RCC1 | BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010224
IEA
InterProresponse to UV-B
GO:0009649
ISO
PLAZA Integrative Orthologyentrainment of circadian clock AT5G63860
GO:0009411
ISO
PLAZA Integrative Orthologyresponse to UV AT5G63860

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009881
IEA
InterProphotoreceptor activity
GO:0042803
IEA
InterProprotein homodimerization activity
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT5G63860
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G63860
GO:0003682
ISO
PLAZA Integrative Orthologychromatin binding AT5G63860

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G63860
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G63860
GO:0000785
ISO
PLAZA Integrative Orthologychromatin AT5G63860

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000408 Regulator of chromosome condensation, RCC1
IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
IPR032996 Ultraviolet-B receptor UVR8
Mapman id Description
26.1.3.1 External stimuli response.light.UV-B light.photoreceptor (UVR8)