Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p08720 Brassica napus
Aa31LG2G21130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.575 Anthoceros agrestis
Actinidia17508 Actinidia chinensis
Actinidia39772 Actinidia chinensis
AL7G23100 Arabidopsis lyrata
Aqoxy7G03965 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.010ZR1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.15W76Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3EW31Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S7PEZI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SSAK10 Arachis hypogaea
AT4G29330 Arabidopsis thaliana
ATR0705G020 Amborella trichopoda
Atru.chr1.861_Atru.chr1.862 Acer truncatum
Atru.chr7.1486 Acer truncatum
Atru.chr7.2047 Acer truncatum
AUR62021379 Chenopodium quinoa
AUR62033297 Chenopodium quinoa
BcaC09g51714 Brassica carinata
BcaNung06566 Brassica carinata
BolC1t00979H Brassica oleracea
BolC7t46165H Brassica oleracea
BraA01t00822Z Brassica rapa
C01p10260 Brassica napus
C07p56870 Brassica napus
CAN.G25.1 Capsicum annuum
CANSAT56G3225 Cannabis sativa
CANSAT56G3695 Cannabis sativa
CANSAT56G4349 Cannabis sativa
CARHR237120 Cardamine hirsuta
Carub.0007s1123 Capsella rubella
CBR_g50024 Chara braunii
Cc02_g04610 Coffea canephora
Cc06_g10660 Coffea canephora
CDE02G4473 Ceratophyllum demersum
Cfa013566 Carpinus fangiana
Ciclev10006512m.g Citrus clementina
Ciclev10009327m.g Citrus clementina
Ciclev10010701m.g Citrus clementina
CiPaw.04G154900 Carya illinoinensis
CiPaw.08G041000 Carya illinoinensis
CiPaw.08G041100 Carya illinoinensis
ClCG03G016020 Citrullus lanatus
ClCG07G016920 Citrullus lanatus
COL.COLO4_34717 Corchorus olitorius
Cpa.g.sc78.35 Carica papaya
Cre12.g523500 Chlamydomonas reinhardtii
CsaV3_1G039940 Cucumis sativus L.
CsaV3_4G004150 Cucumis sativus L.
CSS0003870 Camellia sinensis var. sinensis
CSS0010753 Camellia sinensis var. sinensis
CSS0019134 Camellia sinensis var. sinensis
CSS0024747 Camellia sinensis var. sinensis
DCAR_001156 Daucus carota
DCAR_012028 Daucus carota
Dinv06584 Davidia involucrata
Dinv16860 Davidia involucrata
Dinv36716 Davidia involucrata
Duzib084G1426 Durio zibethinus
Duzib168G0311 Durio zibethinus
Duzib187G0499 Durio zibethinus
Duzib187G1904 Durio zibethinus
ECA234G0809 Erigeron canadensis
ECA238G1081 Erigeron canadensis
EL10Ac8g18359 Beta vulgaris
Eucgr.A02914 Eucalyptus grandis
Eucgr.C00616 Eucalyptus grandis
Eucgr.L03015 Eucalyptus grandis
Eucgr.L03016 Eucalyptus grandis
FAN01G0008 Fragaria x ananassa
FAN19G0865 Fragaria x ananassa
FAN23G0715 Fragaria x ananassa
FAN26G0034 Fragaria x ananassa
FAN26G1350 Fragaria x ananassa
FAN28G2543 Fragaria x ananassa
FvH4_1g06480 Fragaria vesca
FvH4_7g27031 Fragaria vesca
Glyma.04G121000 Glycine max
Glyma.05G225500 Glycine max
Glyma.06G317800 Glycine max
Glyma.08G032300 Glycine max
Gohir.A05G045000 Gossypium hirsutum
Gohir.A08G243800 Gossypium hirsutum
Gohir.D05G046700 Gossypium hirsutum
Gohir.D08G264700 Gossypium hirsutum
Gohir.D12G199500 Gossypium hirsutum
Gorai.004G282600 Gossypium raimondii
Gorai.008G214700 Gossypium raimondii
Gorai.009G048000 Gossypium raimondii
GSVIVG01014004001 Vitis vinifera
GSVIVG01014007001 Vitis vinifera
GSVIVG01035321001 Vitis vinifera
HanXRQChr09g0238801 Helianthus annuus
HanXRQChr14g0461241 Helianthus annuus
Haze_22185 Corylus avellana
Haze_25842 Corylus avellana
Hma1.2p1_0432F.1_g151990 Hydrangea macrophylla
HPP92_024447 Vanilla planifolia
Hund09084 Selenicereus undatus
Lalb_Chr05g0223371 Lupinus albus
Lalb_Chr18g0048931 Lupinus albus
Lj4C370T5 Lonicera japonica
Lj4g0006706 Lotus japonicus
Lj8A45T75 Lonicera japonica
Lj8C45T8 Lonicera japonica
Lsat_1_v5_gn_5_144820 Lactuca sativa
Manes.03G028500 Manihot esculenta
Manes.06G132200 Manihot esculenta
Manes.16G107300 Manihot esculenta
Mapoly0115s0025 Marchantia polymorpha
MBI04_g34106_MAGBIO Magnolia biondii
MCO01G373 Micromonas commoda
MD02G1068100 Malus domestica
MD07G1249900 Malus domestica
MD15G1199700 Malus domestica
Medtr3g408340 Medicago truncatula
Medtr8g102300 Medicago truncatula
MELO3C015425.2 Cucumis melo
MELO3C017652.2 Cucumis melo
Migut.J01083 Erythranthe guttata
MSTRG.19544 Avicennia marina
MSTRG.8839 Avicennia marina
Nitab4.5_0000012g0130 Nicotiana tabacum
Nitab4.5_0005084g0020 Nicotiana tabacum
Nitab4.5_0008421g0020 Nicotiana tabacum
Nn1g00900 Nelumbo nucifera
Nn6g35350 Nelumbo nucifera
Nn8g39031 Nelumbo nucifera
Oeu018245.1 Olea europaea
Oeu060867.1 Olea europaea
Oeu060870.1 Olea europaea
Os05g0187800 Oryza sativa ssp. japonica
Peaxi162Scf00298g00612 Petunia axillaris
PGR031G3614 Punica granatum
PGR042G1625 Punica granatum
Phvul.002G307400 Phaseolus vulgaris
Phvul.005G008800 Phaseolus vulgaris
Potri.004G233100 Populus trichocarpa
Potri.004G233200 Populus trichocarpa
Potri.006G153000 Populus trichocarpa
Pp3c9_3330 Physcomitrium patens
PRCOL_00000829 Prasinoderma coloniale
Prupe.2G273500 Prunus persica
Prupe.7G217500 Prunus persica
Psat5g228400 Pisum sativum
Psat7g018200 Pisum sativum
PSO210G3677 Papaver somniferum
PSO210G4566 Papaver somniferum
PSO782G0813 Papaver somniferum
QL02p040686 Quercus lobata
QL09p028242 Quercus lobata
QL09p028279 Quercus lobata
QL09p028311 Quercus lobata
QL09p028332 Quercus lobata
QL09p028358 Quercus lobata
RcHm_v2.0_Chr1g0373841 Rosa chinensis
RcHm_v2.0_Chr2g0092231 Rosa chinensis
Rhsim03G0162600 Rhododendron simsii
Rhsim03G0162700 Rhododendron simsii
Rhsim05G0027900 Rhododendron simsii
Sabra06G0121200 Salix brachista
SalBow6G0632 Salvia bowleyana
Sc18g0001600 Simmondsia chinensis
Sed0027234 Sechium edule
Sed0027967 Sechium edule
SEGI_00472 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05172 Striga asiatica
SMO356G0714 Selaginella moellendorffii
Solyc05g026310.4 Solanum lycopersicum
Sopen05g022580 Solanum pennellii
Sp7g27210 Schrenkiella parvula
TAR383G0511 Trochodendron aralioides
TAR629G0202 Trochodendron aralioides
TAR629G1457 Trochodendron aralioides
TAR636G0281 Trochodendron aralioides
THA.LOC104814589 Tarenaya hassleriana
Thecc.03G150000 Theobroma cacao
Thecc.09G048700 Theobroma cacao
Thecc.09G098100 Theobroma cacao
Thhalv10025986m.g Eutrema salsugineum
TPR.G12297 Trifolium pratense
TPR.G23463 Trifolium pratense
TWI32G1300 Tripterygium wilfordii
TWI63G1483 Tripterygium wilfordii
TWI63G1639 Tripterygium wilfordii
unitig_22.g6320 Utricularia gibba
vmacro10840 Vaccinium macrocarpon
vmacro22350 Vaccinium macrocarpon
VMungo0251G1642 Vigna mungo
VMungo1080G0710 Vigna mungo
Zm00001eb283510 Zea mays
Zm00001eb350050 Zea mays

User provided reference genes

Program Settings