Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p41240 Brassica napus
A03p33480 Brassica napus
A05p43400 Brassica napus
Aa31LG5G14540 Aethionema arabicum
Aa31sc19G80 Aethionema arabicum
Aa31sc26G80 Aethionema arabicum
Aa31sc46G10 Aethionema arabicum
Aa31sc46G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3360 Anthoceros agrestis
Actinidia22085 Actinidia chinensis
Actinidia30554 Actinidia chinensis
Ah.13g075330 Amaranthus hybridus
AL3G13870 Arabidopsis lyrata
AL6G29410 Arabidopsis lyrata
Aqoxy2G00582 Aquilegia oxysepala
AT3G03960 Arabidopsis thaliana
ATR0697G160 Amborella trichopoda
Atru.chr2.1362 Acer truncatum
AUR62032060 Chenopodium quinoa
AUR62032687 Chenopodium quinoa
BcaC05g29888 Brassica carinata
BcaC05g30238 Brassica carinata
BcaC05g30297 Brassica carinata
BcaC07g40580 Brassica carinata
BcaC09g47768 Brassica carinata
BcaNung04528 Brassica carinata
BNapus_Darmor_BZH_scaffold_78p00470 Brassica napus
BolC1t05791H Brassica oleracea
BolC1t05795H Brassica oleracea
BolC2t08311H Brassica oleracea
BolC3t16333H Brassica oleracea
BolC5t34962H Brassica oleracea
BolC6t38139H Brassica oleracea
BraA01t04547Z Brassica rapa
BraA03t12523Z Brassica rapa
BraA05t23080Z Brassica rapa
C02p21770 Brassica napus
C03p40680 Brassica napus
C05p63100 Brassica napus
C06p29780 Brassica napus
CAN.G410.8 Capsicum annuum
CANSAT25G3570 Cannabis sativa
CARHR078090 Cardamine hirsuta
Carub.0003s0321 Capsella rubella
Ca_04492_v3 Cicer arietinum L.
Ca_25711_v3 Cicer arietinum L.
CBR_g26488 Chara braunii
Cc00_g22850 Coffea canephora
Cc02_g37620 Coffea canephora
Cc02_g37670 Coffea canephora
Cc06_g22900 Coffea canephora
CDE01G0608 Ceratophyllum demersum
CDE02G4312 Ceratophyllum demersum
CDE05G1661 Ceratophyllum demersum
Cfa016437 Carpinus fangiana
Ciclev10019583m.g Citrus clementina
CiPaw.06G089700 Carya illinoinensis
CiPaw.09G001600 Carya illinoinensis
ClCG10G013350 Citrullus lanatus
COL.COLO4_13606 Corchorus olitorius
Cpa.g.sc51.110 Carica papaya
Cre03.g168450 Chlamydomonas reinhardtii
CsaV3_3G043280 Cucumis sativus L.
CSS0000727 Camellia sinensis var. sinensis
CSS0002970 Camellia sinensis var. sinensis
CSS0030797 Camellia sinensis var. sinensis
CSS0033021 Camellia sinensis var. sinensis
CSS0036387 Camellia sinensis var. sinensis
DCAR_019879 Daucus carota
Dinv14581 Davidia involucrata
Dinv37012 Davidia involucrata
Duzib106G1656 Durio zibethinus
Duzib177G1081 Durio zibethinus
ECA232G4643 Erigeron canadensis
EL10Ac3g06816 Beta vulgaris
EL10Ac5g12659 Beta vulgaris
Eucgr.A02095 Eucalyptus grandis
FAN02G2614 Fragaria x ananassa
FAN05G2827 Fragaria x ananassa
FAN09G2390 Fragaria x ananassa
FAN14G1825 Fragaria x ananassa
FvH4_6g27660 Fragaria vesca
Glyma.02G071900 Glycine max
Glyma.03G030700 Glycine max
Glyma.16G153200 Glycine max
Gohir.A11G258900 Gossypium hirsutum
Gohir.A11G296700 Gossypium hirsutum
Gohir.D11G269000 Gossypium hirsutum
Gohir.D11G310200 Gossypium hirsutum
Gohir.D11G312000 Gossypium hirsutum
Gohir.D11G312410 Gossypium hirsutum
Gorai.007G288800 Gossypium raimondii
Gorai.007G343600 Gossypium raimondii
GSVIVG01033394001 Vitis vinifera
HanXRQChr08g0227471 Helianthus annuus
Haze_19414 Corylus avellana
Haze_26940 Corylus avellana
Hma1.2p1_1145F.1_g261380 Hydrangea macrophylla
HPP92_017517 Vanilla planifolia
Hund19239 Selenicereus undatus
Hund24836 Selenicereus undatus
Hund24837 Selenicereus undatus
Lalb_Chr21g0316131 Lupinus albus
Lalb_Chr21g0316151 Lupinus albus
Lj1A1137T80 Lonicera japonica
Lj1g0028009 Lotus japonicus
Lj8A582T9 Lonicera japonica
Lsat_1_v5_gn_3_135221 Lactuca sativa
Lsat_1_v5_gn_3_59580 Lactuca sativa
Lsat_1_v5_gn_4_42920 Lactuca sativa
Lsat_1_v5_gn_5_150841 Lactuca sativa
Lsat_1_v5_gn_5_93080 Lactuca sativa
Lsat_1_v5_gn_6_85040 Lactuca sativa
Manes.08G143700 Manihot esculenta
Manes.09G141800 Manihot esculenta
Mapoly0052s0054 Marchantia polymorpha
MBI01_g27917_MAGBIO Magnolia biondii
MBI19_g46610_MAGBIO Magnolia biondii
MCO11G566 Micromonas commoda
MD09G1235600 Malus domestica
MD17G1264300 Malus domestica
MD17G1264600 Malus domestica
Medtr1g030650 Medicago truncatula
Medtr6g032870 Medicago truncatula
MELO3C026888.2 Cucumis melo
Migut.C00324 Erythranthe guttata
Migut.J01891 Erythranthe guttata
MSTRG.10861 Avicennia marina
MSTRG.26066 Avicennia marina
Nitab4.5_0002187g0060 Nicotiana tabacum
Nitab4.5_0006695g0030 Nicotiana tabacum
Nn6g34503 Nelumbo nucifera
Nn7g35821 Nelumbo nucifera
Nn8g39788 Nelumbo nucifera
Oeu012404.4 Olea europaea
Os03g0804800 Oryza sativa ssp. japonica
Peaxi162Scf00071g00913 Petunia axillaris
Peaxi162Scf01108g00120 Petunia axillaris
PGR142G1170 Punica granatum
PGSC0003DMG400006829 Solanum tuberosum
Phvul.004G079800 Phaseolus vulgaris
Phvul.004G079900 Phaseolus vulgaris
Phvul.004G080500 Phaseolus vulgaris
Potri.013G058500 Populus trichocarpa
Potri.019G034200 Populus trichocarpa
Pp3c15_13410 Physcomitrium patens
Pp3c15_13420 Physcomitrium patens
PRCOL_00000219 Prasinoderma coloniale
Prupe.3G113600 Prunus persica
Prupe.3G114000 Prunus persica
Psat0s2522g0160 Pisum sativum
Psat0s3407g0040 Pisum sativum
Psat5g199800 Pisum sativum
PSO013G0403 Papaver somniferum
PSO063G2497 Papaver somniferum
PSO339G2052 Papaver somniferum
PSO384G2052 Papaver somniferum
QL07p019694 Quercus lobata
QL07p030356 Quercus lobata
QL07p030735 Quercus lobata
RcHm_v2.0_Chr2g0130701 Rosa chinensis
Rhsim01G0190500 Rhododendron simsii
Rhsim03G0001500 Rhododendron simsii
Rhsim03G0008300 Rhododendron simsii
Sabra13G0052100 Salix brachista
Sabra19G0042100 Salix brachista
SalBow1G0837 Salvia bowleyana
SalBow1G8202 Salvia bowleyana
SalBow8G1634 Salvia bowleyana
Sc13g0002700 Simmondsia chinensis
Sed0013215 Sechium edule
Sed0026355 Sechium edule
SEGI_12794 Sequoiadendron giganteum
SEGI_15532 Sequoiadendron giganteum
SGA_v2.0_scaffold274G46518 Striga asiatica
SMO353G0351 Selaginella moellendorffii
Solyc01g088080.3 Solanum lycopersicum
Sopen01g034950 Solanum pennellii
Sp3g02930 Schrenkiella parvula
TAR369G0685 Trochodendron aralioides
TAR623G0935 Trochodendron aralioides
THA.LOC104802866 Tarenaya hassleriana
THA.LOC104820734 Tarenaya hassleriana
Thecc.05G294000 Theobroma cacao
Thhalv10020448m.g Eutrema salsugineum
TPR.G34618 Trifolium pratense
TPR.G36870 Trifolium pratense
TWI32G0619 Tripterygium wilfordii
TWI34G1951 Tripterygium wilfordii
unitig_899.g15071 Utricularia gibba
vmacro12568 Vaccinium macrocarpon
VMungo0464G1078 Vigna mungo
Zm00001eb114320 Zea mays
Zm00001eb200400 Zea mays

User provided reference genes

Program Settings