Gene: COL.COLO4_13606
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_13606
- Transcript Identifier COL.rna12392
- Gene Type Coding gene
- Location AWUE01015209.1 : 107443-111143 : positive
Gene Family Information
- ID HOM05D000278
- #Genes/#Species 1571/100
- Phylogenetic origin
- ID ORTHO05D004031
- #Genes/#Species 194/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna12392
- GenBank OMO98950.1
- id gene13578
- gene_name COLO4_13606
- uniprot A0A1R3JVW1
Descriptions
- Description Chaperonin Cpn60/TCP-1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006457 | IEA | GOA Database | protein folding | |
| GO:0006457 | IEA | InterPro | protein folding | |
| GO:0051050 | ISO | PLAZA Integrative Orthology | positive regulation of transport | AT3G03960 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0051082 | IEA | GOA Database | unfolded protein binding | |
| GO:0051082 | IEA | InterPro | unfolded protein binding | |
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G03960 |
| GO:0044183 | ISO | PLAZA Integrative Orthology | protein folding chaperone | AT3G03960 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G03960 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G03960 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012721 | T-complex protein 1, theta subunit |
| IPR017998 | Chaperone tailless complex polypeptide 1 (TCP-1) |
| IPR027409 | GroEL-like apical domain superfamily |
| IPR027413 | GroEL-like equatorial domain superfamily |
| IPR027410 | TCP-1-like chaperonin intermediate domain superfamily |
| IPR002423 | Chaperonin Cpn60/TCP-1 family |
| Mapman id | Description |
|---|---|
| 20.3.1.8 | Cytoskeleton organisation.actin and tubulin folding.CCT chaperonin folding complex.subunit theta (CCT8) |