Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p28000 Brassica napus
Aa31LG3G17790 Aethionema arabicum
Actinidia14976 Actinidia chinensis
Ah.04g154370 Amaranthus hybridus
Ah.13g073970 Amaranthus hybridus
AL6G19530 Arabidopsis lyrata
Aqoxy3G02485 Aquilegia oxysepala
Aqoxy3G02513 Aquilegia oxysepala
Aqoxy3G04208 Aquilegia oxysepala
Aqoxy7G03756 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1CZ7RW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.34Z3BG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.58UXC0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9L0M57 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DCIQ1B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DY9A0E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F0QMSU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FQ9DWZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MKJD0U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RG7NZB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UQR3KX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UZQ5G1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YH1KLB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZQQT14 Arachis hypogaea
AT5G08780 Arabidopsis thaliana
Atru.chr12.1001 Acer truncatum
AUR62014126 Chenopodium quinoa
AUR62032767 Chenopodium quinoa
AUR62038081 Chenopodium quinoa
AUR62038169 Chenopodium quinoa
AUR62042685 Chenopodium quinoa
BcaB05g21566 Brassica carinata
BcaB08g37226 Brassica carinata
BolC9t59569H Brassica oleracea
BraA10t44850Z Brassica rapa
C09p68200 Brassica napus
CAN.G698.4 Capsicum annuum
CAN.G710.2 Capsicum annuum
CANSAT35G0183 Cannabis sativa
CARHR204230 Cardamine hirsuta
Carub.0006s0775 Capsella rubella
Ca_08976_v3 Cicer arietinum L.
Ca_18736_v3 Cicer arietinum L.
Ca_26223_v3 Cicer arietinum L.
Cc11_g08570 Coffea canephora
Cc11_g08580 Coffea canephora
CDE05G1078 Ceratophyllum demersum
CDE05G1564 Ceratophyllum demersum
Cfa020037 Carpinus fangiana
Ciclev10010434m.g Citrus clementina
Ciclev10015830m.g Citrus clementina
CiPaw.03G044500 Carya illinoinensis
CiPaw.04G078100 Carya illinoinensis
ClCG01G006200 Citrullus lanatus
COL.COLO4_20494 Corchorus olitorius
COL.COLO4_31986 Corchorus olitorius
Cpa.g.sc37.24 Carica papaya
Cpa.g.sc37.25 Carica papaya
CsaV3_5G028450 Cucumis sativus L.
CSS0020544 Camellia sinensis var. sinensis
CSS0022216 Camellia sinensis var. sinensis
CSS0033557 Camellia sinensis var. sinensis
CSS0040679 Camellia sinensis var. sinensis
CSS0042175 Camellia sinensis var. sinensis
CSS0042277 Camellia sinensis var. sinensis
DCAR_007298 Daucus carota
DCAR_007444 Daucus carota
DCAR_007987 Daucus carota
DCAR_010614 Daucus carota
DCAR_015823 Daucus carota
DCAR_025401 Daucus carota
DCAR_030223 Daucus carota
DCAR_032040 Daucus carota
DCAR_032335 Daucus carota
Dinv07655 Davidia involucrata
Dinv14425 Davidia involucrata
Duzib248G1110 Durio zibethinus
Duzib251G0891 Durio zibethinus
ECA246G2591 Erigeron canadensis
EL10Ac1g00119 Beta vulgaris
Eucgr.J02424 Eucalyptus grandis
Eucgr.J02425 Eucalyptus grandis
Eucgr.K02265 Eucalyptus grandis
FAN12G2732 Fragaria x ananassa
FvH4_4g32502 Fragaria vesca
Glyma.07G218500 Glycine max
Glyma.09G108100 Glycine max
Gohir.A04G141600 Gossypium hirsutum
Gohir.D04G187300 Gossypium hirsutum
Gorai.012G181100 Gossypium raimondii
GSVIVG01011748001 Vitis vinifera
HanXRQChr15g0476831 Helianthus annuus
HanXRQChr15g0476841 Helianthus annuus
Haze_20167 Corylus avellana
Haze_20169 Corylus avellana
Haze_20171 Corylus avellana
Haze_20172 Corylus avellana
HPP92_003328 Vanilla planifolia
HPP92_003335 Vanilla planifolia
Hund01243 Selenicereus undatus
Lalb_Chr05g0219531 Lupinus albus
Lj4g0023305 Lotus japonicus
Lsat_1_v5_gn_3_55241 Lactuca sativa
Lsat_1_v5_gn_3_55361 Lactuca sativa
Lsat_1_v5_gn_3_55381 Lactuca sativa
Manes.17G077700 Manihot esculenta
Manes.17G077833 Manihot esculenta
MBI16_g42308_MAGBIO Magnolia biondii
MBI19_g32901_MAGBIO Magnolia biondii
MD06G1045800 Malus domestica
MD13G1024700 Malus domestica
Medtr1g048840 Medicago truncatula
Medtr4g019680 Medicago truncatula
Medtr4g084700 Medicago truncatula
Medtr7g106530 Medicago truncatula
MELO3C005307.2 Cucumis melo
Migut.E00431 Erythranthe guttata
Migut.L00358 Erythranthe guttata
Nitab4.5_0000426g0240 Nicotiana tabacum
Nitab4.5_0000926g0060 Nicotiana tabacum
Nitab4.5_0004230g0020 Nicotiana tabacum
Nitab4.5_0007359g0040 Nicotiana tabacum
Nitab4.5_0007504g0010 Nicotiana tabacum
Nitab4.5_0007504g0020 Nicotiana tabacum
Nitab4.5_0007504g0040 Nicotiana tabacum
Nn4g24185 Nelumbo nucifera
Oeu003381.1 Olea europaea
Oeu042607.1 Olea europaea
Oeu045858.1 Olea europaea
Oeu055065.1 Olea europaea
Peaxi162Scf00047g00334 Petunia axillaris
Peaxi162Scf00253g01127 Petunia axillaris
PGR042G3954 Punica granatum
PGSC0003DMG401006007 Solanum tuberosum
PGSC0003DMG402005954 Solanum tuberosum
PGSC0003DMG402006007 Solanum tuberosum
Phvul.002G094900 Phaseolus vulgaris
Prupe.1G325800 Prunus persica
Prupe.5G053600 Prunus persica
Prupe.5G231500 Prunus persica
Psat7g128680 Pisum sativum
PSO017G3155 Papaver somniferum
QL10p028121 Quercus lobata
QL10p040527 Quercus lobata
RcHm_v2.0_Chr4g0441381 Rosa chinensis
RcHm_v2.0_Chr7g0206331 Rosa chinensis
Rhsim09G0066300 Rhododendron simsii
Rhsim09G0097300 Rhododendron simsii
SalBow8G0982 Salvia bowleyana
Sc04g0005050 Simmondsia chinensis
Sed0005667 Sechium edule
SGA_v2.0_scaffold39G15180 Striga asiatica
SGA_v2.0_scaffold50G18496 Striga asiatica
Solyc02g033030.3 Solanum lycopersicum
Solyc04g007720.3 Solanum lycopersicum
Solyc05g026260.1 Solanum lycopersicum
Solyc10g075173.1 Solanum lycopersicum
Solyc10g150139.1 Solanum lycopersicum
Solyc11g013580.1 Solanum lycopersicum
Solyc11g013590.1 Solanum lycopersicum
Solyc11g013600.2 Solanum lycopersicum
Solyc11g013630.1 Solanum lycopersicum
Solyc11g013670.1 Solanum lycopersicum
Solyc11g013680.1 Solanum lycopersicum
Solyc11g013710.1 Solanum lycopersicum
Solyc11g013720.1 Solanum lycopersicum
Sopen04g002810 Solanum pennellii
Sopen05g022500 Solanum pennellii
Sopen05g022510 Solanum pennellii
Sopen10g027660 Solanum pennellii
Sopen10g027670 Solanum pennellii
Sopen10g027700 Solanum pennellii
Sopen10g027720 Solanum pennellii
Sopen11g008610 Solanum pennellii
Sopen11g008640 Solanum pennellii
Sopen11g008650 Solanum pennellii
TAR629G0208 Trochodendron aralioides
THA.LOC104800215 Tarenaya hassleriana
Thecc.02G282500 Theobroma cacao
Thhalv10015336m.g Eutrema salsugineum
TPR.G19120 Trifolium pratense
TPR.G19124 Trifolium pratense
TPR.G19130 Trifolium pratense
TPR.G29102 Trifolium pratense
TPR.G31286 Trifolium pratense
TPR.G32483 Trifolium pratense
TPR.G32510 Trifolium pratense
TPR.G38350 Trifolium pratense
TWI31G1292 Tripterygium wilfordii
TWI79G0768 Tripterygium wilfordii
unitig_0.g2324 Utricularia gibba
vmacro00413 Vaccinium macrocarpon
VMungo0251G2258 Vigna mungo
Zm00001eb075100 Zea mays
Zm00001eb427820 Zea mays

User provided reference genes

Program Settings