Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p17340 Brassica napus
A05p36350 Brassica napus
Aa31LG10G440 Aethionema arabicum
Aa31LG8G510 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2223 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4666 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5330 Anthoceros agrestis
Actinidia10580 Actinidia chinensis
Actinidia30369 Actinidia chinensis
Ah.01g016790 Amaranthus hybridus
Ah.01g016810 Amaranthus hybridus
Ah.03g148640 Amaranthus hybridus
Ah.03g148660 Amaranthus hybridus
Ah.16g106460 Amaranthus hybridus
Ah.16g107980 Amaranthus hybridus
AL1G63860 Arabidopsis lyrata
AL3G25080 Arabidopsis lyrata
Aqoxy4G03102 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.V7LA8U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YUWQ2H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z231WD Arachis hypogaea
AT3G13230 Arabidopsis thaliana
ATR0686G089 Amborella trichopoda
ATR0686G129 Amborella trichopoda
ATR0743G241 Amborella trichopoda
Atru.chr1.1993 Acer truncatum
AUR62003592 Chenopodium quinoa
AUR62017904 Chenopodium quinoa
AUR62017905 Chenopodium quinoa
AUR62026671 Chenopodium quinoa
AUR62033193 Chenopodium quinoa
AUR62035669 Chenopodium quinoa
AUR62040577 Chenopodium quinoa
AUR62043266 Chenopodium quinoa
AUR62043564 Chenopodium quinoa
AUR62043565 Chenopodium quinoa
BcaB02g10801 Brassica carinata
BcaB02g10802 Brassica carinata
BcaB06g25476 Brassica carinata
BcaB06g25477 Brassica carinata
BcaC05g29198 Brassica carinata
BcaC08g44215 Brassica carinata
BolC5t34140H Brassica oleracea
BolC6t36818H Brassica oleracea
BraA05t20630Z Brassica rapa
BraA05t22435Z Brassica rapa
C05p54700 Brassica napus
C06p16210 Brassica napus
CAN.G874.67 Capsicum annuum
CANSAT01G1535 Cannabis sativa
CANSAT01G1735 Cannabis sativa
CANSAT78G0394 Cannabis sativa
CARHR087880 Cardamine hirsuta
Carub.0003s1264 Capsella rubella
Ca_07475_v3 Cicer arietinum L.
Ca_14849_v3 Cicer arietinum L.
Ca_27956_v3 Cicer arietinum L.
CBR_g49013 Chara braunii
Cc07_g13980 Coffea canephora
CDE10G1248 Ceratophyllum demersum
Cfa016938 Carpinus fangiana
Cfa026698 Carpinus fangiana
Ciclev10029250m.g Citrus clementina
Ciclev10032222m.g Citrus clementina
CiPaw.11G208600 Carya illinoinensis
CiPaw.14G096300 Carya illinoinensis
ClCG01G000820 Citrullus lanatus
ClCG10G004100 Citrullus lanatus
COL.COLO4_07759 Corchorus olitorius
Cpa.g.sc106.81 Carica papaya
Cpa.g.sc19.128 Carica papaya
Cre12.g549700 Chlamydomonas reinhardtii
CsaV3_3G003950 Cucumis sativus L.
CsaV3_5G000960 Cucumis sativus L.
CSS0009706 Camellia sinensis var. sinensis
CSS0032042 Camellia sinensis var. sinensis
DCAR_013538 Daucus carota
DCAR_023786 Daucus carota
Dinv41799 Davidia involucrata
Duzib170G0574 Durio zibethinus
Duzib213G0004 Durio zibethinus
Duzib268G1061 Durio zibethinus
ECA233G1945 Erigeron canadensis
EL10Ac1g01597 Beta vulgaris
EL10Ac4g07749 Beta vulgaris
EL10Ac4g08690 Beta vulgaris
EL10Ac4g10262 Beta vulgaris
EL10Ac4g10278 Beta vulgaris
Eucgr.K00301 Eucalyptus grandis
FAN03G3056 Fragaria x ananassa
FAN08G1169 Fragaria x ananassa
FAN17G0134 Fragaria x ananassa
FAN18G3876 Fragaria x ananassa
FvH4_5g31610 Fragaria vesca
Glyma.08G337300 Glycine max
Glyma.08G337600 Glycine max
Glyma.18G072600 Glycine max
Glyma.18G072700 Glycine max
Gohir.A04G003200 Gossypium hirsutum
Gohir.A13G130156 Gossypium hirsutum
Gohir.D05G386500 Gossypium hirsutum
Gohir.D13G133300 Gossypium hirsutum
Gorai.009G453200 Gossypium raimondii
Gorai.013G149600 Gossypium raimondii
GSVIVG01008219001 Vitis vinifera
HanXRQChr08g0232741 Helianthus annuus
Haze_09893 Corylus avellana
Haze_26506 Corylus avellana
Hma1.2p1_0193F.1_g084090 Hydrangea macrophylla
Hma1.2p1_2995F.1_g331420 Hydrangea macrophylla
HPP92_006270 Vanilla planifolia
Hund02357 Selenicereus undatus
Hund02372 Selenicereus undatus
Lalb_Chr15g0082451 Lupinus albus
Lalb_Chr20g0115311 Lupinus albus
Lj1P897T22 Lonicera japonica
Lj5g0012042 Lotus japonicus
Lj6g0015324 Lotus japonicus
Lsat_1_v5_gn_5_681 Lactuca sativa
Manes.03G143100 Manihot esculenta
Manes.05G206500 Manihot esculenta
Mapoly0008s0090 Marchantia polymorpha
MBI10_g27408_MAGBIO Magnolia biondii
MBI10_g27411_MAGBIO Magnolia biondii
MBI16_g24676_MAGBIO Magnolia biondii
MCO11G345 Micromonas commoda
MD03G1039400 Malus domestica
MD11G1039900 Malus domestica
Medtr3g061130 Medicago truncatula
Medtr5g088410 Medicago truncatula
MELO3C005848.2 Cucumis melo
MELO3C014081.2 Cucumis melo
Migut.K00808 Erythranthe guttata
Migut.K00809 Erythranthe guttata
MSTRG.15682 Avicennia marina
MSTRG.3724 Avicennia marina
Nitab4.5_0000876g0050 Nicotiana tabacum
Nitab4.5_0006644g0010 Nicotiana tabacum
Nitab4.5_0012601g0010 Nicotiana tabacum
Nn1g09837 Nelumbo nucifera
Nn2g11712 Nelumbo nucifera
Oeu017108.1 Olea europaea
Os01g0788950 Oryza sativa ssp. japonica
Os03g0115200 Oryza sativa ssp. japonica
Peaxi162Scf00359g10124 Petunia axillaris
Peaxi162Scf01158g00027 Petunia axillaris
PGR042G2666 Punica granatum
PGR083G2770 Punica granatum
PGSC0003DMG400030475 Solanum tuberosum
Phvul.002G190300 Phaseolus vulgaris
Phvul.006G060100 Phaseolus vulgaris
Potri.001G469200 Populus trichocarpa
Potri.011G166000 Populus trichocarpa
Pp3c2_270 Physcomitrium patens
PRCOL_00004610 Prasinoderma coloniale
Prupe.6G031600 Prunus persica
Prupe.6G032300 Prunus persica
Psat5g164680 Pisum sativum
PSO675G7280 Papaver somniferum
QL08p001639 Quercus lobata
RcHm_v2.0_Chr7g0227141 Rosa chinensis
Rhsim09G0029600 Rhododendron simsii
Sabra16G0318200 Salix brachista
Sc03g0011690 Simmondsia chinensis
Sc07g0001980 Simmondsia chinensis
Sc07g0001990 Simmondsia chinensis
Sed0010383 Sechium edule
Sed0014715 Sechium edule
Sed0017285 Sechium edule
Sed0019842 Sechium edule
SEGI_07786 Sequoiadendron giganteum
SGA_v2.0_scaffold17G08096 Striga asiatica
SGA_v2.0_scaffold312G48272 Striga asiatica
SGA_v2.0_scaffold45G17223 Striga asiatica
SHI18619 Sapria himalayana
SMO353G0217 Selaginella moellendorffii
Sopen06g034020 Solanum pennellii
Sopen10g014340 Solanum pennellii
Sopen12g018710 Solanum pennellii
Sp1g41330 Schrenkiella parvula
Sp3g11460 Schrenkiella parvula
TAR627G1074 Trochodendron aralioides
TAR629G1228 Trochodendron aralioides
THA.LOC104801911 Tarenaya hassleriana
THA.LOC104822711 Tarenaya hassleriana
Thecc.07G005500 Theobroma cacao
Thhalv10014450m.g Eutrema salsugineum
Thhalv10021508m.g Eutrema salsugineum
TPR.G17934 Trifolium pratense
TWI73G0622 Tripterygium wilfordii
unitig_0.g2650 Utricularia gibba
unitig_748.g8474 Utricularia gibba
vmacro11627 Vaccinium macrocarpon
VMungo0251G3320 Vigna mungo
VMungo0540G0608 Vigna mungo
Zm00001eb138570 Zea mays
Zm00001eb151110 Zea mays
Zm00001eb369690 Zea mays

User provided reference genes

Program Settings