Gene: AT3G13230

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G13230
  • Transcript Identifier AT3G13230.1
  • Gene Type Coding gene
  • Location Chr3 : 4270423-4271070 : positive

Gene Family Information

  • ID HOM05D003402
  • #Genes/#Species 201/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G13230.1
  • uniprot Q9LTU6

Descriptions

  • Description RNA-binding KH domain-containing protein
  • Computational description RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087); Has 734 Blast hits to 734 proteins in 323 species: Archae - 189; Bacteria - 0; Metazoa - 158; Fungi - 192; Plants - 83; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
Gene OntologyRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005730
IBA
Gene Ontologynucleolus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036612 K Homology domain, type 1 superfamily
IPR004087 K Homology domain
IPR039912 Pre-rRNA-processing protein PNO1-like
Mapman id Description
17.1.3.2.2.2 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear export.export factor (Dim2)