Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p07890 Brassica napus
A02p08010 Brassica napus
A05p34930 Brassica napus
A10p16110 Brassica napus
Aa31LG3G13890 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.430 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4184 Anthoceros agrestis
Actinidia04282 Actinidia chinensis
Actinidia23542 Actinidia chinensis
Actinidia38342 Actinidia chinensis
Actinidia38685 Actinidia chinensis
AL8G34160 Arabidopsis lyrata
Aqoxy6G01790 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2IXB55 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6C44PS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F2WDYD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G8W2EZ Arachis hypogaea
AT5G58060 Arabidopsis thaliana
AT5G58180 Arabidopsis thaliana
ATR0561G028 Amborella trichopoda
ATR0721G094 Amborella trichopoda
ATR0721G125 Amborella trichopoda
Atru.chr7.157 Acer truncatum
AUR62009538 Chenopodium quinoa
AUR62037643 Chenopodium quinoa
AUR62039179 Chenopodium quinoa
AUR62043315 Chenopodium quinoa
AUR62044192 Chenopodium quinoa
BcaB05g22399 Brassica carinata
BcaB08g36153 Brassica carinata
BcaC03g14126 Brassica carinata
BcaC04g19910 Brassica carinata
BolC2t07465H Brassica oleracea
BolC2t07478H Brassica oleracea
BolC3t13900H Brassica oleracea
BolC9t57851H Brassica oleracea
BraA02t05862Z Brassica rapa
BraA02t05873Z Brassica rapa
BraA05t22307Z Brassica rapa
BraA10t43618Z Brassica rapa
C02p13530 Brassica napus
C02p13660 Brassica napus
C03p14590 Brassica napus
C09p49980 Brassica napus
CAN.G520.20 Capsicum annuum
CANSAT11G1948 Cannabis sativa
CARHR271870 Cardamine hirsuta
Carub.0008s1861 Capsella rubella
Ca_21939_v3 Cicer arietinum L.
CBR_g31440 Chara braunii
Cc06_g15310 Coffea canephora
CDE05G2640 Ceratophyllum demersum
CDE11G0734 Ceratophyllum demersum
Cfa020851 Carpinus fangiana
Ciclev10009544m.g Citrus clementina
CiPaw.15G173700 Carya illinoinensis
CiPaw.16G115200 Carya illinoinensis
ClCG06G012230 Citrullus lanatus
COL.COLO4_18772 Corchorus olitorius
Cpa.g.sc43.124 Carica papaya
Cpa.g.sc46.121 Carica papaya
Cre17.g728150 Chlamydomonas reinhardtii
CsaV3_1G028720 Cucumis sativus L.
CSS0017962 Camellia sinensis var. sinensis
CSS0028901 Camellia sinensis var. sinensis
CSS0029907 Camellia sinensis var. sinensis
DCAR_017901 Daucus carota
DCAR_019371 Daucus carota
Dinv41402 Davidia involucrata
Dinv42887 Davidia involucrata
Dinv43213 Davidia involucrata
Duzib187G0039 Durio zibethinus
ECA234G0443 Erigeron canadensis
ECA240G3497 Erigeron canadensis
ECA240G4234 Erigeron canadensis
EL10Ac9g22448 Beta vulgaris
Eucgr.C00369 Eucalyptus grandis
Eucgr.C04043 Eucalyptus grandis
Eucgr.L00628 Eucalyptus grandis
FAN19G2646 Fragaria x ananassa
FAN23G1365 Fragaria x ananassa
FAN26G1724 Fragaria x ananassa
FAN28G2727 Fragaria x ananassa
FvH4_1g01250 Fragaria vesca
Glyma.09G097700 Glycine max
Glyma.13G136600 Glycine max
Gohir.A05G051300 Gossypium hirsutum
Gohir.A07G026100 Gossypium hirsutum
Gohir.A08G251500 Gossypium hirsutum
Gohir.D05G052800 Gossypium hirsutum
Gohir.D07G030000 Gossypium hirsutum
Gohir.D08G273000 Gossypium hirsutum
Gorai.001G031200 Gossypium raimondii
Gorai.004G291400 Gossypium raimondii
Gorai.009G054600 Gossypium raimondii
GSVIVG01003730001 Vitis vinifera
GSVIVG01031355001 Vitis vinifera
HanXRQChr03g0092001 Helianthus annuus
HanXRQChr09g0243541 Helianthus annuus
HanXRQChr10g0314611 Helianthus annuus
HanXRQChr12g0357281 Helianthus annuus
Haze_19239 Corylus avellana
Hma1.2p1_0028F.1_g017350 Hydrangea macrophylla
Hma1.2p1_0222F.1_g093280 Hydrangea macrophylla
HPP92_004387 Vanilla planifolia
HPP92_004427 Vanilla planifolia
HPP92_016148 Vanilla planifolia
HPP92_027190 Vanilla planifolia
Hund08390 Selenicereus undatus
Lalb_Chr03g0042481 Lupinus albus
Lalb_Chr19g0125201 Lupinus albus
Lj6g0015999 Lotus japonicus
Lj9A713T34 Lonicera japonica
Lsat_1_v5_gn_3_121981 Lactuca sativa
Lsat_1_v5_gn_5_91400 Lactuca sativa
Lsat_1_v5_gn_7_48340 Lactuca sativa
Manes.06G039400 Manihot esculenta
Manes.14G141300 Manihot esculenta
Mapoly0127s0017 Marchantia polymorpha
MBI18_g03876_MAGBIO Magnolia biondii
MCO13G211 Micromonas commoda
MD02G1010400 Malus domestica
MD04G1077800 Malus domestica
MD15G1155400 Malus domestica
MD17G1171100 Malus domestica
Medtr4g105490 Medicago truncatula
MELO3C010243.2 Cucumis melo
Migut.J01319 Erythranthe guttata
Migut.K00345 Erythranthe guttata
MSTRG.10628 Avicennia marina
Nitab4.5_0001094g0120 Nicotiana tabacum
Nitab4.5_0001970g0010 Nicotiana tabacum
Nitab4.5_0005407g0030 Nicotiana tabacum
Nn2g14304 Nelumbo nucifera
Nn2g14309 Nelumbo nucifera
Oeu028815.1 Olea europaea
Oeu043494.2 Olea europaea
Os01g0866300 Oryza sativa ssp. japonica
Os01g0964000 Oryza sativa ssp. japonica
Peaxi162Scf00108g00616 Petunia axillaris
Peaxi162Scf00347g00622 Petunia axillaris
PGR102G2532 Punica granatum
PGR142G2272 Punica granatum
PGSC0003DMG400003194 Solanum tuberosum
Phvul.004G108500 Phaseolus vulgaris
Potri.006G187700 Populus trichocarpa
Potri.018G110700 Populus trichocarpa
Pp3c16_16980 Physcomitrium patens
Pp3c27_2650 Physcomitrium patens
PRCOL_00000446 Prasinoderma coloniale
Prupe.7G259700 Prunus persica
Psat1g158680 Pisum sativum
Psat4g058880 Pisum sativum
PSO170G5058 Papaver somniferum
PSO210G7514 Papaver somniferum
PSO302G0011 Papaver somniferum
PSO357G0388 Papaver somniferum
PSO407G0004 Papaver somniferum
PSO761G0723 Papaver somniferum
QL02p092524 Quercus lobata
RcHm_v2.0_Chr2g0086021 Rosa chinensis
Rhsim01G0044100 Rhododendron simsii
Rhsim03G0256000 Rhododendron simsii
Sabra06G0143500 Salix brachista
SalBow1G7292 Salvia bowleyana
Sc12g0008910 Simmondsia chinensis
Sed0010420 Sechium edule
Sed0019848 Sechium edule
SEGI_02362 Sequoiadendron giganteum
SGA_v2.0_scaffold206G41821 Striga asiatica
SGA_v2.0_scaffold387G50513 Striga asiatica
SMO358G0658 Selaginella moellendorffii
SMO361G0743 Selaginella moellendorffii
Solyc07g005200.3 Solanum lycopersicum
Sopen07g001570 Solanum pennellii
Sp6g19730 Schrenkiella parvula
TAR374G1612 Trochodendron aralioides
TAR383G0058 Trochodendron aralioides
TAR625G1383 Trochodendron aralioides
TAR636G1686 Trochodendron aralioides
THA.LOC104813543 Tarenaya hassleriana
THA.LOC104817832 Tarenaya hassleriana
Thecc.09G034100 Theobroma cacao
Thhalv10014720m.g Eutrema salsugineum
TPR.G37572 Trifolium pratense
TWI34G0086 Tripterygium wilfordii
TWI63G1800 Tripterygium wilfordii
unitig_52.g17568 Utricularia gibba
unitig_62.g23483 Utricularia gibba
unitig_899.g15450 Utricularia gibba
vmacro06094 Vaccinium macrocarpon
vmacro07961 Vaccinium macrocarpon
vmacro08171 Vaccinium macrocarpon
vmacro13040 Vaccinium macrocarpon
VMungo0464G0291 Vigna mungo
Zm00001eb146760 Zea mays
Zm00001eb356250 Zea mays
Zm00001eb362460 Zea mays
Zm00001eb366710 Zea mays

User provided reference genes

Program Settings