Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p02190 Brassica napus
A03p06180 Brassica napus
Aa31LG2G15250 Aethionema arabicum
Actinidia20653 Actinidia chinensis
Actinidia21532 Actinidia chinensis
AL6G24420 Arabidopsis lyrata
Aqoxy2G00215 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.S8KRYV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WU4ZTR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y4Z44P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YN40WG Arachis hypogaea
AT5G13800 Arabidopsis thaliana
ATR0320G046 Amborella trichopoda
Atru.chr11.2554 Acer truncatum
AUR62009433 Chenopodium quinoa
AUR62023112 Chenopodium quinoa
BcaB01g05336 Brassica carinata
BcaNung04182 Brassica carinata
BolC2t06590H Brassica oleracea
BolC3t13220H Brassica oleracea
BraA02t05192Z Brassica rapa
BraA03t09952Z Brassica rapa
C02p06440 Brassica napus
C03p07190 Brassica napus
CAN.G410.9 Capsicum annuum
CANSAT80G0128 Cannabis sativa
CARHR199640 Cardamine hirsuta
Carub.0006s1198 Capsella rubella
Ca_14192_v3 Cicer arietinum L.
Cc04_g14700 Coffea canephora
CDE08G0464 Ceratophyllum demersum
CDE09G0790 Ceratophyllum demersum
Ciclev10031731m.g Citrus clementina
CiPaw.13G008700 Carya illinoinensis
CiPaw.14G004400 Carya illinoinensis
ClCG09G004480 Citrullus lanatus
COL.COLO4_12325 Corchorus olitorius
Cpa.g.sc197.25 Carica papaya
Cre12.g514700 Chlamydomonas reinhardtii
CsaV3_7G030660 Cucumis sativus L.
CSS0019872 Camellia sinensis var. sinensis
CSS0030270 Camellia sinensis var. sinensis
CSS0040475 Camellia sinensis var. sinensis
CSS0041809 Camellia sinensis var. sinensis
CSS0045227 Camellia sinensis var. sinensis
DCAR_031814 Daucus carota
Dinv07420 Davidia involucrata
Dinv43398 Davidia involucrata
Duzib133G0052 Durio zibethinus
Duzib138G1830 Durio zibethinus
ECA150G0009 Erigeron canadensis
ECA232G0062 Erigeron canadensis
ECA232G0952 Erigeron canadensis
ECA232G1552 Erigeron canadensis
ECA232G2428 Erigeron canadensis
ECA232G3122 Erigeron canadensis
ECA232G3821 Erigeron canadensis
ECA232G4142 Erigeron canadensis
ECA233G0420 Erigeron canadensis
ECA233G2808 Erigeron canadensis
ECA233G2853 Erigeron canadensis
ECA233G3662 Erigeron canadensis
ECA233G5378 Erigeron canadensis
ECA233G6103 Erigeron canadensis
ECA234G0093 Erigeron canadensis
ECA234G1742 Erigeron canadensis
ECA234G3411 Erigeron canadensis
ECA234G3752 Erigeron canadensis
ECA236G1017 Erigeron canadensis
ECA236G2274 Erigeron canadensis
ECA236G3234 Erigeron canadensis
ECA236G3868 Erigeron canadensis
ECA238G0658 Erigeron canadensis
ECA238G0728 Erigeron canadensis
ECA238G0753 Erigeron canadensis
ECA238G1128 Erigeron canadensis
ECA238G1577 Erigeron canadensis
ECA238G3776 Erigeron canadensis
ECA238G3812 Erigeron canadensis
ECA238G4214 Erigeron canadensis
ECA238G4558 Erigeron canadensis
ECA238G4685 Erigeron canadensis
ECA240G0423 Erigeron canadensis
ECA240G2470 Erigeron canadensis
ECA240G2498 Erigeron canadensis
ECA240G3668 Erigeron canadensis
ECA240G4013 Erigeron canadensis
ECA240G4025 Erigeron canadensis
ECA240G4599 Erigeron canadensis
ECA246G1297 Erigeron canadensis
ECA246G3537 Erigeron canadensis
ECA246G4293 Erigeron canadensis
ECA246G5282 Erigeron canadensis
ECA247G0359 Erigeron canadensis
ECA247G1620 Erigeron canadensis
ECA247G2457 Erigeron canadensis
ECA247G3286 Erigeron canadensis
ECA247G3304 Erigeron canadensis
ECA247G3465 Erigeron canadensis
ECA247G3717 Erigeron canadensis
ECA247G3908 Erigeron canadensis
ECA248G0458 Erigeron canadensis
ECA248G0906 Erigeron canadensis
ECA248G0956 Erigeron canadensis
ECA248G2425 Erigeron canadensis
ECA248G2579 Erigeron canadensis
ECA248G2889 Erigeron canadensis
ECA248G3814 Erigeron canadensis
EL10Ac2g04388 Beta vulgaris
Eucgr.G03276 Eucalyptus grandis
FAN01G1598 Fragaria x ananassa
FAN03G0804 Fragaria x ananassa
FAN03G2955 Fragaria x ananassa
FAN06G1297 Fragaria x ananassa
FvH4_7g01940 Fragaria vesca
Glyma.09G226000 Glycine max
Glyma.11G157976 Glycine max
Glyma.12G010600 Glycine max
Gohir.A08G141100 Gossypium hirsutum
Gohir.A12G100000 Gossypium hirsutum
Gohir.D08G162200 Gossypium hirsutum
Gohir.D12G102900 Gossypium hirsutum
Gorai.004G168500 Gossypium raimondii
Gorai.008G112100 Gossypium raimondii
GSVIVG01001445001 Vitis vinifera
HanXRQChr05g0159011 Helianthus annuus
Haze_03096 Corylus avellana
Haze_03117 Corylus avellana
Haze_03120 Corylus avellana
Haze_11740 Corylus avellana
Hma1.2p1_0269F.1_g107780 Hydrangea macrophylla
HPP92_011273 Vanilla planifolia
HPP92_011294 Vanilla planifolia
Hund02666 Selenicereus undatus
Lalb_Chr04g0263761 Lupinus albus
Lj3g0008484 Lotus japonicus
Lj9A642T54 Lonicera japonica
Lsat_1_v5_gn_1_100221 Lactuca sativa
Manes.06G024300 Manihot esculenta
MBI13_g36813_MAGBIO Magnolia biondii
MCO09G111 Micromonas commoda
MD02G1299000 Malus domestica
MD07G1025100 Malus domestica
Medtr3g034670 Medicago truncatula
MELO3C023590.2 Cucumis melo
Migut.B01255 Erythranthe guttata
Migut.N01808 Erythranthe guttata
MSTRG.17001 Avicennia marina
MSTRG.5048 Avicennia marina
Nitab4.5_0000087g0130 Nicotiana tabacum
Nitab4.5_0002187g0050 Nicotiana tabacum
Nitab4.5_0006695g0060 Nicotiana tabacum
Nitab4.5_0008059g0020 Nicotiana tabacum
Nn2g15162 Nelumbo nucifera
Nn7g36359 Nelumbo nucifera
Oeu014600.1 Olea europaea
Os06g0354700 Oryza sativa ssp. japonica
Peaxi162Scf00071g00942 Petunia axillaris
Peaxi162Scf01108g00012 Petunia axillaris
PGR031G0424 Punica granatum
PGSC0003DMG400006768 Solanum tuberosum
PGSC0003DMG400023127 Solanum tuberosum
Phvul.005G035700 Phaseolus vulgaris
Phvul.011G013400 Phaseolus vulgaris
Potri.009G054800 Populus trichocarpa
Pp3c25_9360 Physcomitrium patens
PRCOL_00003308 Prasinoderma coloniale
Prupe.2G025100 Prunus persica
Prupe.6G030800 Prunus persica
Psat5g211600 Pisum sativum
PSO339G1599 Papaver somniferum
PSO339G4442 Papaver somniferum
QL04p010554 Quercus lobata
RcHm_v2.0_Chr1g0318661 Rosa chinensis
RcHm_v2.0_Chr1g0318891 Rosa chinensis
Rhsim01G0124600 Rhododendron simsii
Sabra09G0040100 Salix brachista
Sabra16G0159200 Salix brachista
SalBow5G3829 Salvia bowleyana
Sc11g0008990 Simmondsia chinensis
Sed0027440 Sechium edule
SGA_v2.0_scaffold119G32770 Striga asiatica
Solyc01g088090.3 Solanum lycopersicum
Solyc10g049560.3 Solanum lycopersicum
Sopen01g034960 Solanum pennellii
Sp6g30220 Schrenkiella parvula
TAR633G0084 Trochodendron aralioides
THA.LOC104819108 Tarenaya hassleriana
THA.LOC104827431 Tarenaya hassleriana
THA.LOC104827432 Tarenaya hassleriana
THA.LOC104827434 Tarenaya hassleriana
THA.LOC109117201 Tarenaya hassleriana
Thecc.01G403500 Theobroma cacao
Thhalv10013390m.g Eutrema salsugineum
TPR.G14573 Trifolium pratense
TPR.G975 Trifolium pratense
TWI73G1133 Tripterygium wilfordii
unitig_0.g979 Utricularia gibba
unitig_61.g26130 Utricularia gibba
vmacro21144 Vaccinium macrocarpon
VMungo1080G0664 Vigna mungo
VMungo1127G2227 Vigna mungo
Zm00001eb231810 Zea mays

User provided reference genes

Program Settings