Gene: COL.COLO4_12325

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_12325
  • Transcript Identifier COL.rna11116
  • Gene Type Coding gene
  • Location AWUE01014906.1 : 4435-12157 : positive

Gene Family Information

  • ID HOM05D000916
  • #Genes/#Species 656/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna11116
  • GenBank OMP00813.1
  • id gene12297
  • gene_name COLO4_12325
  • uniprot A0A1R3K156

Descriptions

  • Description GIY-YIG nuclease superfamily
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015996
IEA
GOA Databasechlorophyll catabolic process
GO:0015996
IEA
InterProchlorophyll catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080124
IEA
GOA Databasepheophytinase activity
GO:0080124
IEA
InterPropheophytinase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G13800

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G13800

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029058 Alpha/Beta hydrolase fold
IPR000305 GIY-YIG endonuclease
IPR032675 Leucine-rich repeat domain superfamily
IPR000073 Alpha/beta hydrolase fold-1
IPR035901 GIY-YIG endonuclease superfamily
IPR038005 Virus X resistance protein-like, coiled-coil domain
IPR044211 Pheophytinase, chloroplastic
IPR041118 Rx, N-terminal
Mapman id Description
7.13.2.5.2 Coenzyme metabolism.chlorophyll metabolism.chlorophyll catabolism.PAO-phyllobilin pathway.pheophytin pheophorbide hydrolase (PPH)