Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p00550 Brassica napus
A03p04640 Brassica napus
A06p32460 Brassica napus
Aa31LG1G16440 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3512 Anthoceros agrestis
Actinidia15927 Actinidia chinensis
Actinidia15931 Actinidia chinensis
Actinidia16391 Actinidia chinensis
Actinidia16394 Actinidia chinensis
Actinidia22785 Actinidia chinensis
Actinidia24167 Actinidia chinensis
Ah.02g129170 Amaranthus hybridus
Ah.03g134350 Amaranthus hybridus
AL112U10040 Arabidopsis lyrata
AL6G21070 Arabidopsis lyrata
AL8G43210 Arabidopsis lyrata
Aqoxy6G00643 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2M0S5R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NJ8Y8Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U4N2LF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y7B72I Arachis hypogaea
AT5G10540 Arabidopsis thaliana
AT5G65620 Arabidopsis thaliana
ATR0800G081 Amborella trichopoda
ATR0800G138 Amborella trichopoda
Atru.chr3.1158 Acer truncatum
Atru.chr3.1159 Acer truncatum
Atru.chr3.1174 Acer truncatum
Atru.chr3.1175 Acer truncatum
Atru.chr3.1176 Acer truncatum
AUR62005894 Chenopodium quinoa
AUR62005895 Chenopodium quinoa
AUR62032883 Chenopodium quinoa
BcaB01g05521 Brassica carinata
BcaB05g21489 Brassica carinata
BcaC01g02851 Brassica carinata
BcaC03g13317 Brassica carinata
BolC2t06413H Brassica oleracea
BolC3t13045H Brassica oleracea
BolC3t18277H Brassica oleracea
BraA02t05038Z Brassica rapa
BraA03t09805Z Brassica rapa
BraA06t26170Z Brassica rapa
C02p04530 Brassica napus
C03p05320 Brassica napus
C03p60130 Brassica napus
CAN.G1061.30 Capsicum annuum
CAN.G1061.31 Capsicum annuum
CAN.G1061.32 Capsicum annuum
CAN.G1061.33 Capsicum annuum
CAN.G1061.34 Capsicum annuum
CAN.G1061.35 Capsicum annuum
CARHR202760 Cardamine hirsuta
CARHR217670 Cardamine hirsuta
CARHR279570 Cardamine hirsuta
Carub.0006s0902 Capsella rubella
Carub.0008s2649 Capsella rubella
Ca_13465_v3 Cicer arietinum L.
CBR_g51495 Chara braunii
Cc00_g02850 Coffea canephora
Cc07_g07930 Coffea canephora
CDE02G1292 Ceratophyllum demersum
CDE04G3591 Ceratophyllum demersum
Cfa006834 Carpinus fangiana
Cfa010111 Carpinus fangiana
Ciclev10024919m.g Citrus clementina
Ciclev10027448m.g Citrus clementina
CiPaw.07G043000 Carya illinoinensis
CiPaw.08G145000 Carya illinoinensis
ClCG07G009830 Citrullus lanatus
COL.COLO4_02571 Corchorus olitorius
COL.COLO4_11684 Corchorus olitorius
Cpa.g.sc129.15 Carica papaya
Cre13.g572900 Chlamydomonas reinhardtii
CsaV3_4G008500 Cucumis sativus L.
CSS0022889 Camellia sinensis var. sinensis
CSS0036027 Camellia sinensis var. sinensis
CSS0037118 Camellia sinensis var. sinensis
CSS0040295 Camellia sinensis var. sinensis
DCAR_010514 Daucus carota
DCAR_021620 Daucus carota
DCAR_021641 Daucus carota
DCAR_025863 Daucus carota
Dinv27004 Davidia involucrata
Dinv29403 Davidia involucrata
Dinv40934 Davidia involucrata
Duzib147G1544 Durio zibethinus
ECA238G0162 Erigeron canadensis
ECA246G4544 Erigeron canadensis
EL10Ac6g13308 Beta vulgaris
Eucgr.I00594 Eucalyptus grandis
Eucgr.I00597 Eucalyptus grandis
Eucgr.L02517 Eucalyptus grandis
FAN19G0255 Fragaria x ananassa
FAN23G1646 Fragaria x ananassa
FAN26G1340 Fragaria x ananassa
FAN28G2550 Fragaria x ananassa
FvH4_1g19050 Fragaria vesca
Glyma.01G020300 Glycine max
Glyma.09G202100 Glycine max
Gohir.A11G208500 Gossypium hirsutum
Gohir.A12G082400 Gossypium hirsutum
Gohir.D11G214900 Gossypium hirsutum
Gohir.D12G080400 Gossypium hirsutum
Gorai.007G230700 Gossypium raimondii
Gorai.008G088600 Gossypium raimondii
Gorai.008G088700 Gossypium raimondii
GSVIVG01003850001 Vitis vinifera
GSVIVG01031425001 Vitis vinifera
HanXRQChr10g0288711 Helianthus annuus
HanXRQChr12g0375551 Helianthus annuus
HanXRQChr14g0447101 Helianthus annuus
Haze_03928 Corylus avellana
Hma1.2p1_0080F.1_g042070 Hydrangea macrophylla
HPP92_025840 Vanilla planifolia
Hund14168 Selenicereus undatus
Lalb_Chr05g0216211 Lupinus albus
Lalb_Chr09g0325801 Lupinus albus
Lj2C429T16 Lonicera japonica
Lj2g0015774 Lotus japonicus
Lj4A176T36 Lonicera japonica
Lsat_1_v5_gn_2_82261 Lactuca sativa
Manes.12G121600 Manihot esculenta
Manes.13G103984 Manihot esculenta
Mapoly0137s0031 Marchantia polymorpha
MBI16_g10449_MAGBIO Magnolia biondii
MBI16_g33083_MAGBIO Magnolia biondii
MBI16_g36493_MAGBIO Magnolia biondii
MCO02G036 Micromonas commoda
MD01G1044200 Malus domestica
Medtr5g030940 Medicago truncatula
MELO3C016079.2 Cucumis melo
Migut.H00290 Erythranthe guttata
MSTRG.23623 Avicennia marina
Nitab4.5_0000291g0100 Nicotiana tabacum
Nitab4.5_0007512g0010 Nicotiana tabacum
Nn1g05669 Nelumbo nucifera
Nn5g29786 Nelumbo nucifera
Oeu007434.1 Olea europaea
Oeu007435.1 Olea europaea
Oeu026995.1 Olea europaea
Oeu044763.1 Olea europaea
Oeu050982.2 Olea europaea
Oeu054746.2 Olea europaea
Os02g0830100 Oryza sativa ssp. japonica
Peaxi162Scf00703g00111 Petunia axillaris
PGR031G2110 Punica granatum
PGSC0003DMG400030613 Solanum tuberosum
Phvul.002G143600 Phaseolus vulgaris
Potri.007G004600 Populus trichocarpa
Potri.009G151300 Populus trichocarpa
Potri.014G010100 Populus trichocarpa
PRCOL_00007257 Prasinoderma coloniale
Prupe.6G167100 Prunus persica
Prupe.6G209200 Prunus persica
Psat2g133960 Pisum sativum
PSO017G2184 Papaver somniferum
PSO478G2230 Papaver somniferum
QL01p014133 Quercus lobata
QL06p037353 Quercus lobata
QL11p013013 Quercus lobata
QL11p013027 Quercus lobata
RcHm_v2.0_Chr2g0110061 Rosa chinensis
RcHm_v2.0_Chr7g0233391 Rosa chinensis
RcHm_v2.0_Chr7g0233411 Rosa chinensis
Rhsim10G0079900 Rhododendron simsii
Rhsim10G0080000 Rhododendron simsii
Sabra07G0003300 Salix brachista
Sabra14G0001500 Salix brachista
Sabra14G0004300 Salix brachista
SalBow3G1603 Salvia bowleyana
SalBow3G2076 Salvia bowleyana
SalBow3G4364 Salvia bowleyana
Sc12g0003840 Simmondsia chinensis
Sc16g0000720 Simmondsia chinensis
Sed0016167 Sechium edule
SEGI_13204 Sequoiadendron giganteum
SEGI_20006 Sequoiadendron giganteum
SEGI_22072 Sequoiadendron giganteum
SGA_v2.0_scaffold121G33140 Striga asiatica
SMO134G0101 Selaginella moellendorffii
SMO134G0121 Selaginella moellendorffii
SMO274G0011 Selaginella moellendorffii
SMO347G0350 Selaginella moellendorffii
SMO353G0212 Selaginella moellendorffii
Solyc02g091580.4 Solanum lycopersicum
Sopen02g036200 Solanum pennellii
Sp2g28710 Schrenkiella parvula
Sp6g32890 Schrenkiella parvula
TAR381G0455 Trochodendron aralioides
TAR625G1042 Trochodendron aralioides
THA.LOC104798525 Tarenaya hassleriana
Thecc.01G084400 Theobroma cacao
Thhalv10003666m.g Eutrema salsugineum
Thhalv10012826m.g Eutrema salsugineum
TPR.G19314 Trifolium pratense
TPR.G37069 Trifolium pratense
TWI53G1123 Tripterygium wilfordii
TWI77G0616 Tripterygium wilfordii
unitig_736.g22352 Utricularia gibba
vmacro05523 Vaccinium macrocarpon
vmacro18038 Vaccinium macrocarpon
VMungo1215G0027 Vigna mungo
Zm00001eb259450 Zea mays

User provided reference genes

Program Settings