Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p14400 Brassica napus
A03p54020 Brassica napus
A03p54030 Brassica napus
Aa31LG6G5160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1870 Anthoceros agrestis
Actinidia14558 Actinidia chinensis
Actinidia14559 Actinidia chinensis
Ah.12g056970 Amaranthus hybridus
AL5G13020 Arabidopsis lyrata
AL7G30380 Arabidopsis lyrata
AL7G30390 Arabidopsis lyrata
Aqoxy7G00341 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.W25JQA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WBB0SP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y73929 Arachis hypogaea
AT4G23100 Arabidopsis thaliana
ATR0680G192 Amborella trichopoda
ATR0810G035 Amborella trichopoda
ATR0810G094 Amborella trichopoda
Atru.chr9.2197 Acer truncatum
Atru.chr9.2198 Acer truncatum
Atru.chr9.2201 Acer truncatum
AUR62003405 Chenopodium quinoa
AUR62010673 Chenopodium quinoa
AUR62017210 Chenopodium quinoa
BcaB03g11757 Brassica carinata
BcaC01g00811 Brassica carinata
BcaC09g51026 Brassica carinata
BcaNung00995 Brassica carinata
BcaNung01474 Brassica carinata
BcaNung01476 Brassica carinata
BcaNung03246 Brassica carinata
BcaNung03247 Brassica carinata
BolC1t01707H Brassica oleracea
BolC3t20748H Brassica oleracea
BolC7t45737H Brassica oleracea
BolC7t45739H Brassica oleracea
BolC7t45742H Brassica oleracea
BolC8t47455H Brassica oleracea
BraA01t01385Z Brassica rapa
BraA03t14470Z Brassica rapa
BraA03t14471Z Brassica rapa
C01p17720 Brassica napus
C03p84590 Brassica napus
C07p52420 Brassica napus
C07p52450 Brassica napus
CAN.G774.27 Capsicum annuum
CANSAT21G0409 Cannabis sativa
CARHR230170 Cardamine hirsuta
CARHR230180 Cardamine hirsuta
Carub.0007s1815 Capsella rubella
Carub.0007s2982 Capsella rubella
Ca_17536_v3 Cicer arietinum L.
Ca_24552_v3 Cicer arietinum L.
CBR_g17908 Chara braunii
Cc08_g14690 Coffea canephora
CDE09G0774 Ceratophyllum demersum
CDE11G0240 Ceratophyllum demersum
Cfa012177 Carpinus fangiana
Cfa012179 Carpinus fangiana
Cfa012180 Carpinus fangiana
Ciclev10019696m.g Citrus clementina
CiPaw.11G135600 Carya illinoinensis
CiPaw.12G093500 Carya illinoinensis
ClCG01G002740 Citrullus lanatus
COL.COLO4_34458 Corchorus olitorius
Cpa.g.sc74.44 Carica papaya
Cre02.g077100 Chlamydomonas reinhardtii
CsaV3_5G002830 Cucumis sativus L.
CSS0000321 Camellia sinensis var. sinensis
CSS0043939 Camellia sinensis var. sinensis
CSS0049388 Camellia sinensis var. sinensis
DCAR_004633 Daucus carota
DCAR_004635 Daucus carota
Dinv37643 Davidia involucrata
Duzib068G0542 Durio zibethinus
Duzib068G0775 Durio zibethinus
Duzib084G0978 Durio zibethinus
ECA246G1277 Erigeron canadensis
EL10Ac5g13059 Beta vulgaris
Eucgr.D01848 Eucalyptus grandis
FAN04G0830 Fragaria x ananassa
FAN08G3005 Fragaria x ananassa
FAN13G1971 Fragaria x ananassa
FAN18G2670 Fragaria x ananassa
FvH4_5g02350 Fragaria vesca
Glyma.01G219900 Glycine max
Glyma.04G126801 Glycine max
Glyma.05G207600 Glycine max
Glyma.08G014300 Glycine max
Glyma.11G023566 Glycine max
Glyma.11G023632 Glycine max
Gohir.A09G192401 Gossypium hirsutum
Gohir.D09G186600 Gossypium hirsutum
Gorai.006G209400 Gossypium raimondii
GSVIVG01019757001 Vitis vinifera
HanXRQChr06g0165551 Helianthus annuus
HanXRQChr17g0533681 Helianthus annuus
Haze_08839 Corylus avellana
Haze_08840 Corylus avellana
Haze_08841 Corylus avellana
Haze_08845 Corylus avellana
Hma1.2p1_0792F.1_g218580 Hydrangea macrophylla
Hma1.2p1_2966F.1_g330980 Hydrangea macrophylla
HPP92_015162 Vanilla planifolia
Hund11475 Selenicereus undatus
Hund14791 Selenicereus undatus
Lalb_Chr05g0224791 Lupinus albus
Lalb_Chr09g0320991 Lupinus albus
Lalb_Chr09g0321001 Lupinus albus
Lalb_Chr09g0333371 Lupinus albus
Lj2A192G38 Lonicera japonica
Lj4g0013021 Lotus japonicus
Lj8A228T23 Lonicera japonica
Lj8A232T62 Lonicera japonica
LjContig00312_ERROPOS870357g0003358 Lotus japonicus
Lsat_1_v5_gn_1_34361 Lactuca sativa
Lsat_1_v5_gn_3_102360 Lactuca sativa
Lsat_1_v5_gn_4_22300 Lactuca sativa
Lsat_1_v5_gn_6_660 Lactuca sativa
Lsat_1_v5_gn_8_94181 Lactuca sativa
Lsat_1_v5_gn_8_94201 Lactuca sativa
Manes.01G061500 Manihot esculenta
Manes.02G022200 Manihot esculenta
Mapoly0043s0124 Marchantia polymorpha
MBI18_g34593_MAGBIO Magnolia biondii
MCO14G076 Micromonas commoda
MD06G1082300 Malus domestica
MD06G1082500 Malus domestica
MD07G1036400 Malus domestica
MD07G1036500 Malus domestica
MD14G1104000 Malus domestica
Medtr5g010210 Medicago truncatula
Medtr5g010230 Medicago truncatula
Medtr5g010250 Medicago truncatula
Medtr8g098350 Medicago truncatula
MELO3C005674.2 Cucumis melo
Migut.A00769 Erythranthe guttata
MSTRG.13837 Avicennia marina
Nitab4.5_0003441g0130 Nicotiana tabacum
Nitab4.5_0010612g0020 Nicotiana tabacum
Nn1g01499 Nelumbo nucifera
Nn6g33441 Nelumbo nucifera
Nn6g33461 Nelumbo nucifera
Oeu009160.2 Olea europaea
Oeu011047.1 Olea europaea
Os05g0129000 Oryza sativa ssp. japonica
Os07g0462000 Oryza sativa ssp. japonica
Peaxi162Scf00119g00083 Petunia axillaris
PGR031G1439 Punica granatum
PGSC0003DMG400012210 Solanum tuberosum
Phvul.002G157600 Phaseolus vulgaris
Phvul.002G289200 Phaseolus vulgaris
Potri.001G104500 Populus trichocarpa
Potri.003G126900 Populus trichocarpa
Pp3c1_34800 Physcomitrium patens
Pp3c22_12540 Physcomitrium patens
Pp3c2_1270 Physcomitrium patens
PRCOL_00004592 Prasinoderma coloniale
Prupe.5G099600 Prunus persica
Prupe.5G099700 Prunus persica
Psat7g033480 Pisum sativum
PSO017G2538 Papaver somniferum
PSO063G0727 Papaver somniferum
QL07p017330 Quercus lobata
QL07p017338 Quercus lobata
QL07p017350 Quercus lobata
QL07p029554 Quercus lobata
QL12p033200 Quercus lobata
RcHm_v2.0_Chr7g0197771 Rosa chinensis
Rhsim02G0229900 Rhododendron simsii
Rhsim02G0230000 Rhododendron simsii
Rhsim02G0230100 Rhododendron simsii
Sabra01G0079200 Salix brachista
Sabra03G0090000 Salix brachista
SalBow7G4504 Salvia bowleyana
SalBow8G3631 Salvia bowleyana
Sc22g0005610 Simmondsia chinensis
Sed0025899 Sechium edule
SEGI_06273 Sequoiadendron giganteum
SEGI_21135 Sequoiadendron giganteum
SEGI_33825 Sequoiadendron giganteum
SGA_v2.0_scaffold173G39193 Striga asiatica
SHI07126 Sapria himalayana
SMO143G0252 Selaginella moellendorffii
SMO353G0160 Selaginella moellendorffii
SMO353G0199 Selaginella moellendorffii
Solyc08g081010.3 Solanum lycopersicum
Sopen08g029330 Solanum pennellii
Sp7g21160 Schrenkiella parvula
TAR629G0119 Trochodendron aralioides
TAR636G2389 Trochodendron aralioides
TAR636G2402 Trochodendron aralioides
THA.LOC104806388 Tarenaya hassleriana
THA.LOC104814473 Tarenaya hassleriana
Thecc.03G278200 Theobroma cacao
Thhalv10024916m.g Eutrema salsugineum
TPR.G12862 Trifolium pratense
TPR.G30225 Trifolium pratense
TPR.G421 Trifolium pratense
TPR.G6641 Trifolium pratense
TWI15G0789 Tripterygium wilfordii
TWI81G0564 Tripterygium wilfordii
TWI81G0961 Tripterygium wilfordii
TWI81G1077 Tripterygium wilfordii
unitig_88.g27613 Utricularia gibba
vmacro11331 Vaccinium macrocarpon
VMungo0251G3225 Vigna mungo
VMungo1215G2488 Vigna mungo
Zm00001eb264980 Zea mays
Zm00001eb354890 Zea mays

User provided reference genes

Program Settings