Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p03460 Brassica napus
A04p31300 Brassica napus
A09p34290 Brassica napus
Aa31LG10G11460 Aethionema arabicum
Aa31LG3G1070 Aethionema arabicum
Aa31LG3G3720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4987 Anthoceros agrestis
Actinidia17700 Actinidia chinensis
Ah.04g150710 Amaranthus hybridus
Ah.13g077130 Amaranthus hybridus
AL3G22300 Arabidopsis lyrata
AL4G38920 Arabidopsis lyrata
AL5G38030 Arabidopsis lyrata
Aqoxy1G00075 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1QMW5J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.470EJV Arachis hypogaea
AT2G40950 Arabidopsis thaliana
AT3G10800 Arabidopsis thaliana
AT3G56660 Arabidopsis thaliana
ATR0307G054 Amborella trichopoda
Atru.chr1.1410 Acer truncatum
AUR62018385 Chenopodium quinoa
AUR62030278 Chenopodium quinoa
BcaB02g08358 Brassica carinata
BcaB04g19781 Brassica carinata
BcaB04g21174 Brassica carinata
BcaB04g21175 Brassica carinata
BcaB04g21177 Brassica carinata
BcaC02g07379 Brassica carinata
BcaC02g09858 Brassica carinata
BcaC02g11096 Brassica carinata
BcaC02g12742 Brassica carinata
BcaC02g12863 Brassica carinata
BcaC02g12870 Brassica carinata
BcaC04g21686 Brassica carinata
BcaC07g37745 Brassica carinata
BolC1t05352H Brassica oleracea
BolC4t21881H Brassica oleracea
BolC4t25216H Brassica oleracea
BolC4t28375H Brassica oleracea
BolC9t55746H Brassica oleracea
BraA01t04221Z Brassica rapa
BraA04t16091Z Brassica rapa
BraA04t18587Z Brassica rapa
BraA09t37858Z Brassica rapa
BraA09t38974Z Brassica rapa
C04p02350 Brassica napus
C04p35840 Brassica napus
C04p68700 Brassica napus
C09p28840 Brassica napus
CAN.G569.64 Capsicum annuum
CAN.G960.76 Capsicum annuum
CANSAT64G1028 Cannabis sativa
CARHR085360 Cardamine hirsuta
CARHR136060 Cardamine hirsuta
CARHR159410 Cardamine hirsuta
CARHR166770 Cardamine hirsuta
Carub.0003s1003 Capsella rubella
Carub.0004s2327 Capsella rubella
Carub.0005s2341 Capsella rubella
Ca_08358_v3 Cicer arietinum L.
CBR_g40793 Chara braunii
Cc06_g20180 Coffea canephora
CDE08G0069 Ceratophyllum demersum
CDE08G1650 Ceratophyllum demersum
Cfa019972 Carpinus fangiana
Ciclev10011169m.g Citrus clementina
CiPaw.09G050600 Carya illinoinensis
CiPaw.10G042900 Carya illinoinensis
ClCG10G016460 Citrullus lanatus
COL.COLO4_19389 Corchorus olitorius
COL.COLO4_26642 Corchorus olitorius
Cpa.g.sc92.68 Carica papaya
CsaV3_3G039880 Cucumis sativus L.
CSS0006760 Camellia sinensis var. sinensis
CSS0013065 Camellia sinensis var. sinensis
CSS0031087 Camellia sinensis var. sinensis
DCAR_013537 Daucus carota
DCAR_020597 Daucus carota
Dinv20756 Davidia involucrata
Dinv20757 Davidia involucrata
Dinv20764 Davidia involucrata
Dinv36122 Davidia involucrata
Duzib106G1517 Durio zibethinus
Duzib128G0339 Durio zibethinus
ECA248G3907 Erigeron canadensis
EL10Ac3g07277 Beta vulgaris
Eucgr.A02199 Eucalyptus grandis
FAN07G2582 Fragaria x ananassa
FAN12G2249 Fragaria x ananassa
FAN12G3806 Fragaria x ananassa
FAN17G2150 Fragaria x ananassa
FAN22G1384 Fragaria x ananassa
FvH4_4g26350 Fragaria vesca
Glyma.03G123200 Glycine max
Glyma.07G017800 Glycine max
Glyma.19G126800 Glycine max
Gohir.A13G001500 Gossypium hirsutum
Gohir.D13G000900 Gossypium hirsutum
Gorai.013G000800 Gossypium raimondii
GSVIVG01025788001 Vitis vinifera
HanXRQChr03g0061511 Helianthus annuus
HanXRQChr13g0388001 Helianthus annuus
Haze_20266 Corylus avellana
Hma1.2p1_0427F.1_g150690 Hydrangea macrophylla
Hma1.2p1_1246F.1_g270160 Hydrangea macrophylla
HPP92_002076 Vanilla planifolia
HPP92_002082 Vanilla planifolia
Hund24551 Selenicereus undatus
Lalb_Chr14g0365581 Lupinus albus
Lalb_Chr22g0357801 Lupinus albus
Lalb_Chr24g0400521 Lupinus albus
Lj1A1084T71 Lonicera japonica
Lj1g0009474 Lotus japonicus
Lj2A408G49 Lonicera japonica
Lsat_1_v5_gn_5_157880 Lactuca sativa
Manes.08G062800 Manihot esculenta
Manes.09G000300 Manihot esculenta
Mapoly0130s0030 Marchantia polymorpha
MBI19_g04333_MAGBIO Magnolia biondii
MD07G1018800 Malus domestica
Medtr7g088890 Medicago truncatula
MELO3C009730.2 Cucumis melo
Migut.J01624 Erythranthe guttata
Migut.K00152 Erythranthe guttata
MSTRG.19782 Avicennia marina
MSTRG.26171 Avicennia marina
MSTRG.6308 Avicennia marina
Nitab4.5_0000123g0440 Nicotiana tabacum
Nitab4.5_0000869g0140 Nicotiana tabacum
Nitab4.5_0004697g0100 Nicotiana tabacum
Nitab4.5_0005963g0050 Nicotiana tabacum
Nn7g36946 Nelumbo nucifera
Oeu022988.1 Olea europaea
Oeu044242.3 Olea europaea
Os05g0411300 Oryza sativa ssp. japonica
Os07g0644100 Oryza sativa ssp. japonica
Peaxi162Scf00003g05235 Petunia axillaris
Peaxi162Scf00076g00222 Petunia axillaris
PGR042G3138 Punica granatum
PGSC0003DMG400007175 Solanum tuberosum
PGSC0003DMG400015702 Solanum tuberosum
PGSC0003DMG400034335 Solanum tuberosum
PGSC0003DMG400034669 Solanum tuberosum
PGSC0003DMG400037194 Solanum tuberosum
PGSC0003DMG400039444 Solanum tuberosum
PGSC0003DMG400039622 Solanum tuberosum
PGSC0003DMG400039820 Solanum tuberosum
PGSC0003DMG400042310 Solanum tuberosum
PGSC0003DMG400042745 Solanum tuberosum
PGSC0003DMG400043350 Solanum tuberosum
PGSC0003DMG400043705 Solanum tuberosum
PGSC0003DMG400044159 Solanum tuberosum
PGSC0003DMG400044241 Solanum tuberosum
PGSC0003DMG400044442 Solanum tuberosum
PGSC0003DMG400044487 Solanum tuberosum
PGSC0003DMG400045500 Solanum tuberosum
Phvul.001G119300 Phaseolus vulgaris
Potri.006G034500 Populus trichocarpa
Potri.016G032400 Populus trichocarpa
Pp3c13_15030 Physcomitrium patens
Pp3c3_16820 Physcomitrium patens
Prupe.2G020400 Prunus persica
Psat0s1772g0040 Pisum sativum
Psat0s1940g0120 Pisum sativum
Psat5g130080 Pisum sativum
PSO339G5716 Papaver somniferum
PSO384G3381 Papaver somniferum
QL07p012681 Quercus lobata
QL07p012799 Quercus lobata
RcHm_v2.0_Chr4g0433931 Rosa chinensis
Sabra06G0023000 Salix brachista
Sabra16G0035700 Salix brachista
SalBow1G6916 Salvia bowleyana
SalBow6G5171 Salvia bowleyana
Sc19g0007990 Simmondsia chinensis
Sc25g0005470 Simmondsia chinensis
Sed0011831 Sechium edule
Sed0023009 Sechium edule
SEGI_25646 Sequoiadendron giganteum
SGA_v2.0_scaffold106G30539 Striga asiatica
SGA_v2.0_scaffold66G22290 Striga asiatica
SGA_v2.0_scaffold69G23173 Striga asiatica
SMO200G0032 Selaginella moellendorffii
Solyc03g013450.3 Solanum lycopersicum
Solyc04g051040.1 Solanum lycopersicum
Solyc04g051060.2 Solanum lycopersicum
Solyc04g056460.2 Solanum lycopersicum
Solyc04g056470.1 Solanum lycopersicum
Solyc04g056490.3 Solanum lycopersicum
Solyc04g056510.1 Solanum lycopersicum
Solyc04g150153.1 Solanum lycopersicum
Solyc08g074850.3 Solanum lycopersicum
Solyc08g074860.1 Solanum lycopersicum
Sopen03g010280 Solanum pennellii
Sopen04g022330 Solanum pennellii
Sopen04g022340 Solanum pennellii
Sopen04g025360 Solanum pennellii
Sopen04g025410 Solanum pennellii
Sopen08g023460 Solanum pennellii
Sopen10g028950 Solanum pennellii
Sp3g09120 Schrenkiella parvula
Sp4g23270 Schrenkiella parvula
Sp5g05900 Schrenkiella parvula
TAR623G0586 Trochodendron aralioides
TAR636G3275 Trochodendron aralioides
THA.LOC104803232 Tarenaya hassleriana
THA.LOC104816495 Tarenaya hassleriana
THA.LOC104824380 Tarenaya hassleriana
Thecc.05G123000 Theobroma cacao
Thhalv10005827m.g Eutrema salsugineum
Thhalv10016317m.g Eutrema salsugineum
Thhalv10020207m.g Eutrema salsugineum
TPR.G22687 Trifolium pratense
TWI53G2142 Tripterygium wilfordii
TWI74G0015 Tripterygium wilfordii
TWI77G0499 Tripterygium wilfordii
unitig_21.g20679 Utricularia gibba
unitig_744.g24169 Utricularia gibba
vmacro08992 Vaccinium macrocarpon
VMungo1383G0888 Vigna mungo
Zm00001eb110370 Zea mays
Zm00001eb288060 Zea mays

User provided reference genes

Program Settings