Gene: Cc06_g20180
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc06_g20180
- Transcript Identifier Cc06_g20180.1
- Gene Type Coding gene
- Location chr6 : 23264653-23267780 : positive
Gene Family Information
- ID HOM05D003027
- #Genes/#Species 227/95
- Phylogenetic origin
- ID ORTHO05D003455
- #Genes/#Species 223/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB F6HQP7
- UniProtKB B9SJN1
- UniProtKB P14233
- UniProtKB B9IHM4
- id GSCOCG00022929001
Descriptions
- Description TGACG-sequence-specific DNA-binding protein TGA-1B (Fragment)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0034976 | ISO | PLAZA Integrative Orthology | response to endoplasmic reticulum stress | AT3G10800 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT2G40950 |
| GO:0030968 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum unfolded protein response | AT3G10800 |
| GO:0009408 | ISO | PLAZA Integrative Orthology | response to heat | AT3G10800 |
| GO:0006986 | ISO | PLAZA Integrative Orthology | response to unfolded protein | AT3G10800 |
| GO:0006990 | ISO | PLAZA Integrative Orthology | positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response | AT3G10800 |
| GO:0042538 | ISO | PLAZA Integrative Orthology | hyperosmotic salinity response | AT2G40950 |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G10800 |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | AT2G40950 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT2G40950 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005789 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum membrane | Os05g0411300 |
| GO:0016020 | ISO | PLAZA Integrative Orthology | membrane | AT3G10800 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G10800 |
| GO:0048471 | ISO | PLAZA Integrative Orthology | perinuclear region of cytoplasm | AT3G10800 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G10800 |
| GO:0005635 | ISO | PLAZA Integrative Orthology | nuclear envelope | AT3G10800 |
| GO:0005654 | ISO | PLAZA Integrative Orthology | nucleoplasm | AT3G10800 |
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT3G10800 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004827 | Basic-leucine zipper domain |