Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p33020 Brassica napus
A05p17010 Brassica napus
Aa31LG8G8680 Aethionema arabicum
Aa31LG9G2230 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2660 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.96 Anthoceros agrestis
Ah.05g168550 Amaranthus hybridus
Ah.16g104290 Amaranthus hybridus
AL7G40520 Arabidopsis lyrata
Aqoxy2G00238 Aquilegia oxysepala
Aqoxy3G03773 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.08WZ1E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.340GL5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KUR4E8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MS128A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NA5Y0V Arachis hypogaea
AT3G22110 Arabidopsis thaliana
AT4G15165 Arabidopsis thaliana
ATR0564G008 Amborella trichopoda
ATR0796G312 Amborella trichopoda
Atru.chr10.312 Acer truncatum
Atru.chr8.353 Acer truncatum
AUR62009508 Chenopodium quinoa
AUR62012361 Chenopodium quinoa
AUR62031490 Chenopodium quinoa
AUR62034778 Chenopodium quinoa
BcaB02g07836 Brassica carinata
BcaB04g20542 Brassica carinata
BcaB06g26308 Brassica carinata
BcaC01g03466 Brassica carinata
BcaC05g28101 Brassica carinata
BcaC08g44248 Brassica carinata
BcaC09g49145 Brassica carinata
BolC1t04177H Brassica oleracea
BolC3t17496H Brassica oleracea
BolC5t32869H Brassica oleracea
BolC6t36856H Brassica oleracea
BraA01t03423Z Brassica rapa
BraA03t13407Z Brassica rapa
BraA05t20606Z Brassica rapa
BraA05t21549Z Brassica rapa
C01p42150 Brassica napus
C03p52170 Brassica napus
C05p41280 Brassica napus
C06p16530 Brassica napus
CAN.G351.6 Capsicum annuum
CAN.G48.9 Capsicum annuum
CAN.G5.34 Capsicum annuum
CAN.G524.3 Capsicum annuum
CAN.G760.8 Capsicum annuum
CAN.G809.65 Capsicum annuum
CAN.G818.2 Capsicum annuum
CAN.G99.7 Capsicum annuum
CANSAT11G2005 Cannabis sativa
CARHR097970 Cardamine hirsuta
CARHR097990 Cardamine hirsuta
CARHR221900 Cardamine hirsuta
Carub.0003s2229 Capsella rubella
Carub.0007s2678 Capsella rubella
Ca_07689_v3 Cicer arietinum L.
Ca_16258_v3 Cicer arietinum L.
Ca_22078_v3 Cicer arietinum L.
CBR_g39424 Chara braunii
Cc09_g05140 Coffea canephora
CDE12G0788 Ceratophyllum demersum
Cfa004861 Carpinus fangiana
Cfa004864 Carpinus fangiana
Cfa025124 Carpinus fangiana
Ciclev10013771m.g Citrus clementina
Ciclev10017953m.g Citrus clementina
CiPaw.03G108800 Carya illinoinensis
CiPaw.08G085600 Carya illinoinensis
ClCG04G007720 Citrullus lanatus
ClCG11G016940 Citrullus lanatus
COL.COLO4_16229 Corchorus olitorius
COL.COLO4_33538 Corchorus olitorius
Cpa.g.sc8.261 Carica papaya
Cre10.g418100 Chlamydomonas reinhardtii
CsaV3_4G025500 Cucumis sativus L.
CsaV3_4G032560 Cucumis sativus L.
CSS0002370 Camellia sinensis var. sinensis
CSS0011385 Camellia sinensis var. sinensis
CSS0017120 Camellia sinensis var. sinensis
CSS0017166 Camellia sinensis var. sinensis
CSS0017574 Camellia sinensis var. sinensis
CSS0032820 Camellia sinensis var. sinensis
CSS0035990 Camellia sinensis var. sinensis
CSS0038377 Camellia sinensis var. sinensis
CSS0045904 Camellia sinensis var. sinensis
CSS0048630 Camellia sinensis var. sinensis
DCAR_018740 Daucus carota
Dinv15376 Davidia involucrata
Dinv26299 Davidia involucrata
Dinv26321 Davidia involucrata
Dinv31194 Davidia involucrata
Duzib147G0860 Durio zibethinus
Duzib248G1010 Durio zibethinus
Duzib264G0813 Durio zibethinus
ECA236G3007 Erigeron canadensis
ECA238G3950 Erigeron canadensis
EL10Ac2g04253 Beta vulgaris
EL10Ac5g11323 Beta vulgaris
Eucgr.H04776 Eucalyptus grandis
FAN16G1290 Fragaria x ananassa
FAN21G0975 Fragaria x ananassa
FAN25G0367 Fragaria x ananassa
FvH4_3g13020 Fragaria vesca
Glyma.01G124900 Glycine max
Glyma.03G049700 Glycine max
Glyma.07G155700 Glycine max
Glyma.18G206200 Glycine max
Gohir.A11G058900 Gossypium hirsutum
Gohir.D11G063100 Gossypium hirsutum
Gorai.007G068200 Gossypium raimondii
GSVIVG01026133001 Vitis vinifera
HanXRQChr06g0182251 Helianthus annuus
HanXRQChr16g0510391 Helianthus annuus
Haze_27466 Corylus avellana
HPP92_026421 Vanilla planifolia
Hund15835 Selenicereus undatus
Lalb_Chr02g0159801 Lupinus albus
Lalb_Chr06g0176441 Lupinus albus
Lalb_Chr12g0207211 Lupinus albus
Lj1g0021699 Lotus japonicus
Lj2P342T106 Lonicera japonica
Lj2P342T76 Lonicera japonica
Lj3g0003558 Lotus japonicus
Lj7P467T19 Lonicera japonica
Lsat_1_v5_gn_5_63841 Lactuca sativa
Lsat_1_v5_gn_8_100560 Lactuca sativa
Lsat_1_v5_gn_8_100600 Lactuca sativa
Manes.06G124100 Manihot esculenta
Manes.14G047200 Manihot esculenta
Mapoly0001s0018 Marchantia polymorpha
MBI02_g01127_MAGBIO Magnolia biondii
MCO01G749 Micromonas commoda
MD05G1246200 Malus domestica
MD09G1143900 Malus domestica
MD10G1227000 Malus domestica
Medtr5g016590 Medicago truncatula
Medtr7g070070 Medicago truncatula
MELO3C003173.2 Cucumis melo
MELO3C026360.2 Cucumis melo
Migut.M02013 Erythranthe guttata
MSTRG.22455 Avicennia marina
Nitab4.5_0000119g0260 Nicotiana tabacum
Nitab4.5_0001837g0030 Nicotiana tabacum
Nitab4.5_0003602g0070 Nicotiana tabacum
Nitab4.5_0004228g0020 Nicotiana tabacum
Nn2g12736 Nelumbo nucifera
Nn8g40992 Nelumbo nucifera
Oeu025259.1 Olea europaea
Oeu046921.2 Olea europaea
Os06g0167600 Oryza sativa ssp. japonica
Os06g0176000 Oryza sativa ssp. japonica
Os06g0177100 Oryza sativa ssp. japonica
Peaxi162Scf00014g00085 Petunia axillaris
Peaxi162Scf00368g00095 Petunia axillaris
PGR031G0413 Punica granatum
PGSC0003DMG400007308 Solanum tuberosum
PGSC0003DMG401019187 Solanum tuberosum
Phvul.008G093300 Phaseolus vulgaris
Phvul.010G065200 Phaseolus vulgaris
Potri.006G008800 Populus trichocarpa
Potri.016G015400 Populus trichocarpa
Pp3c10_5250 Physcomitrium patens
Pp3c12_12990 Physcomitrium patens
Pp3c3_28170 Physcomitrium patens
Pp3c4_9140 Physcomitrium patens
Prupe.3G183900 Prunus persica
Prupe.4G118100 Prunus persica
Psat0s1867g0160 Pisum sativum
Psat0s4196g0040 Pisum sativum
Psat3g125840 Pisum sativum
Psat6g226400 Pisum sativum
Psat6g226720 Pisum sativum
PSO017G1543 Papaver somniferum
PSO170G0100 Papaver somniferum
QL02p069525 Quercus lobata
QL03p065971 Quercus lobata
QL03p066082 Quercus lobata
RcHm_v2.0_Chr5g0021211 Rosa chinensis
Rhsim04G0015300 Rhododendron simsii
Rhsim05G0150100 Rhododendron simsii
Rhsim07G0106800 Rhododendron simsii
Rhsim07G0107400 Rhododendron simsii
RhsimUnG0064000 Rhododendron simsii
RhsimUnG0134600 Rhododendron simsii
Sabra06G0006700 Salix brachista
Sabra16G0000800 Salix brachista
Sabra16G0017300 Salix brachista
SalBow6G4757 Salvia bowleyana
SalBow6G6303 Salvia bowleyana
SalBow8G2306 Salvia bowleyana
Sc12g0003780 Simmondsia chinensis
Sed0002609 Sechium edule
Sed0010288 Sechium edule
Sed0015011 Sechium edule
Sed0019624 Sechium edule
SEGI_02006 Sequoiadendron giganteum
SGA_v2.0_scaffold12G06235 Striga asiatica
SGA_v2.0_scaffold24G10638 Striga asiatica
SGA_v2.0_scaffold298G47710 Striga asiatica
SMO361G0263 Selaginella moellendorffii
Solyc02g081700.1 Solanum lycopersicum
Sopen02g026310 Solanum pennellii
Sp3g19940 Schrenkiella parvula
Sp7g13390 Schrenkiella parvula
TAR626G0170 Trochodendron aralioides
TAR627G0041 Trochodendron aralioides
THA.LOC104802531 Tarenaya hassleriana
THA.LOC104808503 Tarenaya hassleriana
THA.LOC104822283 Tarenaya hassleriana
Thecc.01G148200 Theobroma cacao
Thecc.02G003400 Theobroma cacao
Thhalv10021384m.g Eutrema salsugineum
Thhalv10026071m.g Eutrema salsugineum
TPR.G26906 Trifolium pratense
TPR.G6653 Trifolium pratense
TWI32G0649 Tripterygium wilfordii
TWI60G0530 Tripterygium wilfordii
unitig_32.g11547 Utricularia gibba
unitig_748.g7488 Utricularia gibba
vmacro09674 Vaccinium macrocarpon
VMungo0331G0298 Vigna mungo
VMungo1383G1245 Vigna mungo
Zm00001eb271660 Zea mays
Zm00001eb375510 Zea mays

User provided reference genes

Program Settings