Gene: Sopen02g026310
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen02g026310
- Transcript Identifier Sopen02g026310.1
- Gene Type Coding gene
- Location Spenn-ch02 : 49301221-49301967 : positive
Gene Family Information
- ID HOM05D000276
- #Genes/#Species 1584/100
- Phylogenetic origin
- ID ORTHO05D003367
- #Genes/#Species 228/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen02g026310.1
Descriptions
- Description Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit alpha-3) - Petunia hybrida (Petunia), Encodes the alpha-3 subunit of 20s proteasome. | 20S proteasome alpha subunit C1 (PAC1) | FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity | INVOLVED IN: response to cadmium ion, ubiquitin-dependent protein catabolic process | LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome, vacuole | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site , Proteasome, subunit alpha/beta | BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006511 | IEA | InterPro | ubiquitin-dependent protein catabolic process | |
GO:0051603 | IEA | InterPro | proteolysis involved in cellular protein catabolic process | |
GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT3G22110 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0019773 | IEA | InterPro | proteasome core complex, alpha-subunit complex | |
GO:0005839 | IEA | InterPro | proteasome core complex | |
GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT3G22110 |
GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G22110 |
GO:0000502 | ISO | PLAZA Integrative Orthology | proteasome complex | AT3G22110 |
GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT3G22110 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
19.2.5.1.1.3 | Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.alpha-type components.component alpha type-3 |