Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p14550 Brassica napus
Aa31LG7G6230 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1795 Anthoceros agrestis
Actinidia00275 Actinidia chinensis
Actinidia00276 Actinidia chinensis
Actinidia24000 Actinidia chinensis
Actinidia29592 Actinidia chinensis
Actinidia33129 Actinidia chinensis
Actinidia33130 Actinidia chinensis
Ah.01g022240 Amaranthus hybridus
Ah.05g169890 Amaranthus hybridus
AL1G35760 Arabidopsis lyrata
Aqoxy6G00762 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.66CWE3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8R41I4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M5A3LZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VGLF4N Arachis hypogaea
AT1G22310 Arabidopsis thaliana
ATR0782G041 Amborella trichopoda
ATR0782G164 Amborella trichopoda
Atru.chr10.1121 Acer truncatum
Atru.chr6.1160 Acer truncatum
AUR62010148 Chenopodium quinoa
AUR62013143 Chenopodium quinoa
AUR62013144 Chenopodium quinoa
AUR62018927 Chenopodium quinoa
AUR62027772 Chenopodium quinoa
BcaB03g14218 Brassica carinata
BcaC06g34950 Brassica carinata
BolC7t42671H Brassica oleracea
BraA07t29201Z Brassica rapa
C07p21440 Brassica napus
CAN.G523.55 Capsicum annuum
CANSAT25G0699 Cannabis sativa
CARHR022690 Cardamine hirsuta
CARHR035350 Cardamine hirsuta
Carub.0001s2186 Capsella rubella
Ca_00141_v3 Cicer arietinum L.
Ca_15252_v3 Cicer arietinum L.
Cc02_g21380 Coffea canephora
Cc10_g07100 Coffea canephora
CDE10G0644 Ceratophyllum demersum
CDE10G0684 Ceratophyllum demersum
Cfa005642 Carpinus fangiana
Cfa013644 Carpinus fangiana
Ciclev10000205m.g Citrus clementina
Ciclev10027826m.g Citrus clementina
CiPaw.06G154400 Carya illinoinensis
CiPaw.07G178900 Carya illinoinensis
ClCG08G011160 Citrullus lanatus
COL.COLO4_16382 Corchorus olitorius
COL.COLO4_29615 Corchorus olitorius
Cpa.g.sc42.36 Carica papaya
Cpa.g.sc42.38 Carica papaya
Cpa.g.sc53.130 Carica papaya
CsaV3_2G029730 Cucumis sativus L.
CSS0008363 Camellia sinensis var. sinensis
CSS0032438 Camellia sinensis var. sinensis
CSS0037093 Camellia sinensis var. sinensis
CSS0049612 Camellia sinensis var. sinensis
DCAR_008741 Daucus carota
DCAR_021864 Daucus carota
Dinv09022 Davidia involucrata
Dinv09023 Davidia involucrata
Dinv09024 Davidia involucrata
Dinv14338 Davidia involucrata
Dinv24181 Davidia involucrata
Dinv44782 Davidia involucrata
Duzib041G0069 Durio zibethinus
Duzib041G0802 Durio zibethinus
Duzib093G1387 Durio zibethinus
Duzib116G0838 Durio zibethinus
ECA232G0543 Erigeron canadensis
ECA232G4158 Erigeron canadensis
ECA234G1059 Erigeron canadensis
ECA236G2475 Erigeron canadensis
ECA247G0600 Erigeron canadensis
EL10Ac1g01207 Beta vulgaris
EL10Ac9g21492 Beta vulgaris
Eucgr.I02657 Eucalyptus grandis
FAN04G0469 Fragaria x ananassa
FAN08G0410 Fragaria x ananassa
FAN13G2209 Fragaria x ananassa
FAN15G3696 Fragaria x ananassa
FAN18G3145 Fragaria x ananassa
FAN20G1033 Fragaria x ananassa
FAN24G2963 Fragaria x ananassa
FvH4_2g11920 Fragaria vesca
FvH4_5g37120 Fragaria vesca
Glyma.04G101200 Glycine max
Glyma.06G102900 Glycine max
Glyma.08G178400 Glycine max
Glyma.15G054200 Glycine max
Gohir.A01G127000 Gossypium hirsutum
Gohir.A03G174900 Gossypium hirsutum
Gohir.D01G114901 Gossypium hirsutum
Gohir.D02G198200 Gossypium hirsutum
Gorai.002G140700 Gossypium raimondii
Gorai.005G221500 Gossypium raimondii
GSVIVG01009040001 Vitis vinifera
GSVIVG01015726001 Vitis vinifera
GSVIVG01020418001 Vitis vinifera
HanXRQChr02g0043481 Helianthus annuus
HanXRQChr05g0145421 Helianthus annuus
HanXRQChr11g0338071 Helianthus annuus
HanXRQChr16g0514751 Helianthus annuus
Haze_10615 Corylus avellana
Haze_22278 Corylus avellana
Haze_22282 Corylus avellana
Hma1.2p1_0522F.1_g171730 Hydrangea macrophylla
HPP92_011216 Vanilla planifolia
Hund06376 Selenicereus undatus
Hund26967 Selenicereus undatus
Lalb_Chr11g0065401 Lupinus albus
Lalb_Chr15g0090391 Lupinus albus
Lalb_Chr18g0060531 Lupinus albus
Lj1g0024313 Lotus japonicus
Lj6g0016748 Lotus japonicus
Lsat_1_v5_gn_1_3860 Lactuca sativa
Lsat_1_v5_gn_5_108081 Lactuca sativa
Lsat_1_v5_gn_7_82001 Lactuca sativa
Manes.07G032600 Manihot esculenta
Manes.18G066500 Manihot esculenta
Mapoly0029s0056 Marchantia polymorpha
MBI02_g05741_MAGBIO Magnolia biondii
MBI02_g35745_MAGBIO Magnolia biondii
MBI02_g36599_MAGBIO Magnolia biondii
MD00G1009700 Malus domestica
MD05G1043400 Malus domestica
MD08G1184300 Malus domestica
MD10G1050700 Malus domestica
MD15G1370800 Malus domestica
Medtr2g009040 Medicago truncatula
Medtr2g066760 Medicago truncatula
Medtr3g074640 Medicago truncatula
MELO3C011031.2 Cucumis melo
Migut.B00599 Erythranthe guttata
Migut.C00133 Erythranthe guttata
MSTRG.20293 Avicennia marina
MSTRG.24975 Avicennia marina
Nitab4.5_0000232g0050 Nicotiana tabacum
Nitab4.5_0000863g0180 Nicotiana tabacum
Nitab4.5_0001619g0030 Nicotiana tabacum
Nitab4.5_0006616g0010 Nicotiana tabacum
Nn1g05384 Nelumbo nucifera
Nn5g30080 Nelumbo nucifera
Oeu024826.1 Olea europaea
Oeu029761.1 Olea europaea
Oeu036916.1 Olea europaea
Os08g0485600 Oryza sativa ssp. japonica
Os08g0485700 Oryza sativa ssp. japonica
Os09g0473300 Oryza sativa ssp. japonica
Os09g0473350 Oryza sativa ssp. japonica
Peaxi162Scf00001g00002 Petunia axillaris
Peaxi162Scf00392g00416 Petunia axillaris
PGR031G1025 Punica granatum
PGSC0003DMG400006417 Solanum tuberosum
PGSC0003DMG400012552 Solanum tuberosum
PGSC0003DMG400036857 Solanum tuberosum
Phvul.006G205800 Phaseolus vulgaris
Phvul.009G031600 Phaseolus vulgaris
Potri.001G312900 Populus trichocarpa
Potri.002G097700 Populus trichocarpa
Potri.005G164100 Populus trichocarpa
Prupe.1G518500 Prunus persica
Prupe.8G062800 Prunus persica
Psat1g216280 Pisum sativum
Psat5g138880 Pisum sativum
PSO210G0747 Papaver somniferum
PSO210G6104 Papaver somniferum
PSO447G0391 Papaver somniferum
PSO531G0001 Papaver somniferum
PSO541G2635 Papaver somniferum
PSO829G0001 Papaver somniferum
QL11p021491 Quercus lobata
QL12p036977 Quercus lobata
RcHm_v2.0_Chr6g0271611 Rosa chinensis
RcHm_v2.0_Chr6g0271621 Rosa chinensis
RcHm_v2.0_Chr6g0271751 Rosa chinensis
RcHm_v2.0_Chr6g0271781 Rosa chinensis
RcHm_v2.0_Chr7g0238671 Rosa chinensis
RcHm_v2.0_Chr7g0243951 Rosa chinensis
RcHm_v2.0_Chr7g0243961 Rosa chinensis
Rhsim06G0081200 Rhododendron simsii
Rhsim11G0137200 Rhododendron simsii
Sabra02G0076700 Salix brachista
Sabra16G0197500 Salix brachista
SalBow5G0297 Salvia bowleyana
SalBow5G2582 Salvia bowleyana
SalBow7G1697 Salvia bowleyana
Sc18g0006800 Simmondsia chinensis
Sc23g0000240 Simmondsia chinensis
Sed0026617 Sechium edule
SEGI_07396 Sequoiadendron giganteum
SEGI_20319 Sequoiadendron giganteum
SGA_v2.0_scaffold14G07129 Striga asiatica
SGA_v2.0_scaffold74G24575 Striga asiatica
SGA_v2.0_scaffold74G24580 Striga asiatica
SGA_v2.0_scaffold83G26306 Striga asiatica
SHI39627 Sapria himalayana
SMO356G0592 Selaginella moellendorffii
Solyc01g105330.3 Solanum lycopersicum
Solyc04g074250.3 Solanum lycopersicum
Solyc04g074260.1 Solanum lycopersicum
Sopen01g047830 Solanum pennellii
Sopen02g012230 Solanum pennellii
Sopen02g012270 Solanum pennellii
Sopen02g012380 Solanum pennellii
Sopen04g029390 Solanum pennellii
Sp1g19810 Schrenkiella parvula
TAR076G0002 Trochodendron aralioides
TAR625G1540 Trochodendron aralioides
THA.LOC104800147 Tarenaya hassleriana
THA.LOC104807164 Tarenaya hassleriana
Thecc.02G136300 Theobroma cacao
Thecc.02G136800 Theobroma cacao
Thecc.08G105500 Theobroma cacao
Thhalv10007200m.g Eutrema salsugineum
TPR.G14997 Trifolium pratense
TPR.G25224 Trifolium pratense
TPR.G26131 Trifolium pratense
TPR.G36116 Trifolium pratense
TWI56G0820 Tripterygium wilfordii
TWI59G1115 Tripterygium wilfordii
unitig_22.g6065 Utricularia gibba
unitig_8.g5045 Utricularia gibba
unitig_8.g5046 Utricularia gibba
vmacro01830 Vaccinium macrocarpon
vmacro01831 Vaccinium macrocarpon
vmacro21264 Vaccinium macrocarpon
VMungo0540G1175 Vigna mungo
VMungo1309G2842 Vigna mungo
Zm00001eb033590 Zea mays
Zm00001eb101320 Zea mays
Zm00001eb199140 Zea mays

User provided reference genes

Program Settings