Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p32210 Brassica napus
A05p15740 Brassica napus
A09p00520 Brassica napus
Aa31LG5G570 Aethionema arabicum
Aa31LG5G6830 Aethionema arabicum
Actinidia10038 Actinidia chinensis
Actinidia20896 Actinidia chinensis
Actinidia23895 Actinidia chinensis
Actinidia34450 Actinidia chinensis
AL4G24410 Arabidopsis lyrata
AL6G53060 Arabidopsis lyrata
Aqoxy4G02646 Aquilegia oxysepala
Aqoxy7G00286 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4DP35H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H0MPRU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KPU33W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NT6TUG Arachis hypogaea
AT2G29650 Arabidopsis thaliana
AT4G00370 Arabidopsis thaliana
ATR0618G337 Amborella trichopoda
ATR0680G278 Amborella trichopoda
Atru.chr5.507 Acer truncatum
AUR62001675 Chenopodium quinoa
AUR62004369 Chenopodium quinoa
AUR62020105 Chenopodium quinoa
AUR62022578 Chenopodium quinoa
BcaB01g02168 Brassica carinata
BcaB01g02246 Brassica carinata
BcaB02g10273 Brassica carinata
BcaC01g06883 Brassica carinata
BcaC02g11050 Brassica carinata
BcaC04g24178 Brassica carinata
BolC3t16196H Brassica oleracea
BolC4t23642H Brassica oleracea
BolC9t52969H Brassica oleracea
BraA03t12391Z Brassica rapa
BraA05t20489Z Brassica rapa
BraA09t35708Z Brassica rapa
C03p39250 Brassica napus
C04p21160 Brassica napus
C09p00340 Brassica napus
CAN.G265.3 Capsicum annuum
CAN.G78.88 Capsicum annuum
CANSAT54G0163 Cannabis sativa
CANSAT56G1847 Cannabis sativa
CARHR122970 Cardamine hirsuta
CARHR248490 Cardamine hirsuta
Carub.0004s1075 Capsella rubella
Carub.0006s3685 Capsella rubella
Ca_07927_v3 Cicer arietinum L.
Ca_14916_v3 Cicer arietinum L.
Ca_23617_v3 Cicer arietinum L.
CBR_g49482 Chara braunii
Cc01_g14000 Coffea canephora
Cc02_g38140 Coffea canephora
CDE02G0704 Ceratophyllum demersum
CDE02G2754 Ceratophyllum demersum
CDE09G0050 Ceratophyllum demersum
CDE09G0921 Ceratophyllum demersum
Cfa003909 Carpinus fangiana
Ciclev10024243m.g Citrus clementina
Ciclev10028231m.g Citrus clementina
CiPaw.02G031900 Carya illinoinensis
CiPaw.13G080200 Carya illinoinensis
CiPaw.14G060700 Carya illinoinensis
ClCG03G000860 Citrullus lanatus
ClCG05G001480 Citrullus lanatus
COL.COLO4_00855 Corchorus olitorius
COL.COLO4_12723 Corchorus olitorius
COL.COLO4_19115 Corchorus olitorius
Cpa.g.sc11.15 Carica papaya
Cpa.g.sc112.47 Carica papaya
Cre01.g023000 Chlamydomonas reinhardtii
Cre03.g187050 Chlamydomonas reinhardtii
Cre08.g379550 Chlamydomonas reinhardtii
Cre12.g515750 Chlamydomonas reinhardtii
CsaV3_1G036070 Cucumis sativus L.
CsaV3_3G008860 Cucumis sativus L.
CSS0035241 Camellia sinensis var. sinensis
CSS0036468 Camellia sinensis var. sinensis
CSS0043896 Camellia sinensis var. sinensis
DCAR_015650 Daucus carota
DCAR_025194 Daucus carota
Dinv14460 Davidia involucrata
Dinv28622 Davidia involucrata
Dinv43824 Davidia involucrata
Duzib138G0031 Durio zibethinus
Duzib168G0116 Durio zibethinus
ECA236G2849 Erigeron canadensis
ECA248G1911 Erigeron canadensis
EL10Ac1g00403 Beta vulgaris
EL10Ac7g16134 Beta vulgaris
EL10Ac7g16139 Beta vulgaris
Eucgr.D02302 Eucalyptus grandis
Eucgr.J01933 Eucalyptus grandis
FAN01G0380 Fragaria x ananassa
FAN03G1558 Fragaria x ananassa
FAN06G0697 Fragaria x ananassa
FAN06G4078 Fragaria x ananassa
FAN10G0019 Fragaria x ananassa
FAN11G0008 Fragaria x ananassa
FAN16G1364 Fragaria x ananassa
FAN21G3580 Fragaria x ananassa
FAN25G1135 Fragaria x ananassa
FvH4_3g38280 Fragaria vesca
FvH4_7g14470 Fragaria vesca
Glyma.03G008200 Glycine max
Glyma.07G069600 Glycine max
Glyma.11G175800 Glycine max
Glyma.18G066000 Glycine max
Glyma.18G233800 Glycine max
Glyma.20G002000 Glycine max
Gohir.A03G049900 Gossypium hirsutum
Gohir.A07G142000 Gossypium hirsutum
Gohir.A11G089500 Gossypium hirsutum
Gohir.D03G117400 Gossypium hirsutum
Gohir.D07G147700 Gossypium hirsutum
Gohir.D11G093800 Gossypium hirsutum
Gorai.001G168900 Gossypium raimondii
Gorai.003G123800 Gossypium raimondii
Gorai.007G100200 Gossypium raimondii
GSVIVG01024780001 Vitis vinifera
GSVIVG01026946001 Vitis vinifera
HanXRQChr06g0169971 Helianthus annuus
HanXRQChr16g0504111 Helianthus annuus
Haze_15522 Corylus avellana
Haze_24260 Corylus avellana
Hma1.2p1_1010F.1_g247350 Hydrangea macrophylla
HPP92_014725 Vanilla planifolia
Hund04883 Selenicereus undatus
Hund16653 Selenicereus undatus
Lalb_Chr10g0096871 Lupinus albus
Lalb_Chr15g0082761 Lupinus albus
Lj1A141T51 Lonicera japonica
Lj3g0017204 Lotus japonicus
Lj6g0020510 Lotus japonicus
Lj7A511G74 Lonicera japonica
Lj9C584T6 Lonicera japonica
Lsat_1_v5_gn_5_172240 Lactuca sativa
Lsat_1_v5_gn_7_4840 Lactuca sativa
Manes.01G255800 Manihot esculenta
Manes.02G121100 Manihot esculenta
Manes.05G033500 Manihot esculenta
Mapoly0037s0126 Marchantia polymorpha
MBI05_g45683_MAGBIO Magnolia biondii
MBI18_g40972_MAGBIO Magnolia biondii
MCO16G370 Micromonas commoda
MD01G1064800 Malus domestica
MD03G1073500 Malus domestica
MD07G1135600 Malus domestica
MD11G1079500 Malus domestica
Medtr2g027710 Medicago truncatula
Medtr3g463080 Medicago truncatula
Medtr7g077830 Medicago truncatula
Medtr8g030600 Medicago truncatula
MELO3C006105.2 Cucumis melo
MELO3C020560.2 Cucumis melo
Migut.B01764 Erythranthe guttata
Migut.D00859 Erythranthe guttata
MSTRG.21230 Avicennia marina
MSTRG.28226 Avicennia marina
Nitab4.5_0000356g0090 Nicotiana tabacum
Nitab4.5_0000583g0140 Nicotiana tabacum
Nitab4.5_0006018g0110 Nicotiana tabacum
Nitab4.5_0014810g0010 Nicotiana tabacum
Nn1g01554 Nelumbo nucifera
Nn2g13646 Nelumbo nucifera
Nn6g33395 Nelumbo nucifera
Oeu045523.2 Olea europaea
Oeu060251.1 Olea europaea
Peaxi162Scf00020g00726 Petunia axillaris
PGR031G2662 Punica granatum
PGR119G1710 Punica granatum
PGSC0003DMG400000047 Solanum tuberosum
PGSC0003DMG400020869 Solanum tuberosum
Phvul.006G064900 Phaseolus vulgaris
Phvul.008G061900 Phaseolus vulgaris
Phvul.010G099800 Phaseolus vulgaris
Potri.001G249800 Populus trichocarpa
Potri.009G043800 Populus trichocarpa
Potri.014G085700 Populus trichocarpa
Pp3c11_22600 Physcomitrium patens
Pp3s30_870 Physcomitrium patens
PRCOL_00003300 Prasinoderma coloniale
Prupe.2G171700 Prunus persica
Prupe.6G060100 Prunus persica
Psat3g108040 Pisum sativum
Psat4g202920 Pisum sativum
Psat5g162880 Pisum sativum
PSO339G6188 Papaver somniferum
PSO384G2018 Papaver somniferum
PSO478G0691 Papaver somniferum
PSO782G2556 Papaver somniferum
QL01p037459 Quercus lobata
QL08p048240 Quercus lobata
RcHm_v2.0_Chr1g0355881 Rosa chinensis
RcHm_v2.0_Chr5g0068811 Rosa chinensis
Rhsim01G0235600 Rhododendron simsii
Rhsim07G0014000 Rhododendron simsii
Sabra09G0031200 Salix brachista
Sabra14G0062000 Salix brachista
Sabra16G0151800 Salix brachista
SalBow3G0347 Salvia bowleyana
SalBow5G2814 Salvia bowleyana
SalBow5G4258 Salvia bowleyana
SalBow6G1210 Salvia bowleyana
Sc06g0006220 Simmondsia chinensis
Sc06g0006340 Simmondsia chinensis
Sc23g0002830 Simmondsia chinensis
Sed0015359 Sechium edule
Sed0016687 Sechium edule
Sed0021584 Sechium edule
SEGI_00743 Sequoiadendron giganteum
SGA_v2.0_scaffold4G02304 Striga asiatica
SMO164G0200 Selaginella moellendorffii
Solyc01g094720.3 Solanum lycopersicum
Solyc09g031750.4 Solanum lycopersicum
Sopen01g038520 Solanum pennellii
Sopen09g014690 Solanum pennellii
Sp4g12370 Schrenkiella parvula
Sp6g00450 Schrenkiella parvula
TAR623G1011 Trochodendron aralioides
TAR629G0774 Trochodendron aralioides
THA.LOC104817026 Tarenaya hassleriana
THA.LOC104825843 Tarenaya hassleriana
THA.LOC104826294 Tarenaya hassleriana
Thecc.01G358000 Theobroma cacao
Thecc.09G304700 Theobroma cacao
Thhalv10016491m.g Eutrema salsugineum
Thhalv10028551m.g Eutrema salsugineum
TPR.G13286 Trifolium pratense
TPR.G16548 Trifolium pratense
TPR.G20853 Trifolium pratense
TPR.G37755 Trifolium pratense
TWI14G0882 Tripterygium wilfordii
TWI75G0152 Tripterygium wilfordii
unitig_8.g4986 Utricularia gibba
vmacro13269 Vaccinium macrocarpon
vmacro14585 Vaccinium macrocarpon
vmacro23338 Vaccinium macrocarpon
VMungo0331G1984 Vigna mungo
VMungo0540G2032 Vigna mungo
VMungo1383G3602 Vigna mungo
Zm00001eb162400 Zea mays
Zm00001eb332610 Zea mays
Zm00001eb356550 Zea mays

User provided reference genes

Program Settings