Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p30680 Brassica napus
A03p50610 Brassica napus
A06p45330 Brassica napus
A09p22780 Brassica napus
Aa31LG9G15200 Aethionema arabicum
Aa31LG9G5930 Aethionema arabicum
Actinidia01022 Actinidia chinensis
Actinidia03400 Actinidia chinensis
Actinidia10871 Actinidia chinensis
Actinidia23304 Actinidia chinensis
Actinidia25931 Actinidia chinensis
Actinidia31483 Actinidia chinensis
Actinidia34403 Actinidia chinensis
Actinidia34414 Actinidia chinensis
Ah.07g199690 Amaranthus hybridus
Ah.12g053780 Amaranthus hybridus
AL1G47020 Arabidopsis lyrata
AL7G36910 Arabidopsis lyrata
AL8G11180 Arabidopsis lyrata
AL8G11200 Arabidopsis lyrata
Aqoxy3G02584 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6R4MXJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D5YLID Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I1CICT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y6VK3W Arachis hypogaea
AT1G32740 Arabidopsis thaliana
AT4G17680 Arabidopsis thaliana
AT5G47050 Arabidopsis thaliana
ATR0829G036 Amborella trichopoda
Atru.chr9.1140 Acer truncatum
AUR62007204 Chenopodium quinoa
AUR62018798 Chenopodium quinoa
BcaB07g30798 Brassica carinata
BcaC03g16922 Brassica carinata
BcaC04g21656 Brassica carinata
BcaC06g31420 Brassica carinata
BcaC06g33572 Brassica carinata
BcaC06g34290 Brassica carinata
BcaNung00069 Brassica carinata
BcaNung04044 Brassica carinata
BolC2t10857H Brassica oleracea
BolC7t43615H Brassica oleracea
BolC7t45401H Brassica oleracea
BolC9t55787H Brassica oleracea
BraA02t08084Z Brassica rapa
BraA03t14152Z Brassica rapa
BraA09t37880Z Brassica rapa
BraA09t38905Z Brassica rapa
C02p48250 Brassica napus
C07p30690 Brassica napus
C07p48930 Brassica napus
C09p29270 Brassica napus
CANSAT21G1942 Cannabis sativa
CARHR032120 Cardamine hirsuta
CARHR174420 Cardamine hirsuta
CARHR224400 Cardamine hirsuta
Carub.0001s3107 Capsella rubella
Carub.0007s2370 Capsella rubella
Carub.0008s0077 Capsella rubella
Ca_22033_v3 Cicer arietinum L.
Ca_31265_v3 Cicer arietinum L.
Cc08_g01570 Coffea canephora
CDE02G1513 Ceratophyllum demersum
CDE02G4450 Ceratophyllum demersum
CDE04G1820 Ceratophyllum demersum
CDE12G0441 Ceratophyllum demersum
Cfa012361 Carpinus fangiana
Ciclev10020548m.g Citrus clementina
CiPaw.11G085800 Carya illinoinensis
CiPaw.12G058700 Carya illinoinensis
ClCG09G012480 Citrullus lanatus
ClCG10G002020 Citrullus lanatus
COL.COLO4_06707 Corchorus olitorius
CsaV3_3G002110 Cucumis sativus L.
CsaV3_3G049650 Cucumis sativus L.
CSS0004938 Camellia sinensis var. sinensis
CSS0025021 Camellia sinensis var. sinensis
DCAR_008308 Daucus carota
DCAR_017100 Daucus carota
Dinv21882 Davidia involucrata
Dinv25169 Davidia involucrata
Dinv28900 Davidia involucrata
Duzib068G0858 Durio zibethinus
Duzib205G1992 Durio zibethinus
ECA233G3513 Erigeron canadensis
ECA240G1721 Erigeron canadensis
ECA246G3342 Erigeron canadensis
EL10Ac5g12214 Beta vulgaris
Eucgr.D02146 Eucalyptus grandis
Eucgr.E00327 Eucalyptus grandis
FAN04G2418 Fragaria x ananassa
FAN07G0963 Fragaria x ananassa
FAN07G2141 Fragaria x ananassa
FAN08G2615 Fragaria x ananassa
FAN11G3527 Fragaria x ananassa
FAN13G1868 Fragaria x ananassa
FAN18G0369 Fragaria x ananassa
FvH4_3g23840 Fragaria vesca
FvH4_5g16050 Fragaria vesca
FvH4_5g20850 Fragaria vesca
Glyma.01G203300 Glycine max
Glyma.05G068400 Glycine max
Glyma.11G039700 Glycine max
Glyma.17G150900 Glycine max
Gohir.A03G003100 Gossypium hirsutum
Gohir.A08G161400 Gossypium hirsutum
Gohir.A11G029600 Gossypium hirsutum
Gohir.A12G211700 Gossypium hirsutum
Gohir.D03G169300 Gossypium hirsutum
Gohir.D08G181300 Gossypium hirsutum
Gohir.D11G028100 Gossypium hirsutum
Gohir.D12G214200 Gossypium hirsutum
Gorai.003G179400 Gossypium raimondii
Gorai.004G190300 Gossypium raimondii
Gorai.007G030800 Gossypium raimondii
Gorai.008G229800 Gossypium raimondii
GSVIVG01013266001 Vitis vinifera
HanXRQChr03g0086941 Helianthus annuus
HanXRQChr06g0167201 Helianthus annuus
HanXRQChr17g0535651 Helianthus annuus
Haze_08322 Corylus avellana
Hma1.2p1_0311F.1_g121150 Hydrangea macrophylla
Hma1.2p1_0414F.1_g147550 Hydrangea macrophylla
HPP92_014648 Vanilla planifolia
HPP92_014649 Vanilla planifolia
HPP92_014926 Vanilla planifolia
HPP92_014929 Vanilla planifolia
HPP92_020690 Vanilla planifolia
Hund11297 Selenicereus undatus
Hund14452 Selenicereus undatus
Lalb_Chr05g0214161 Lupinus albus
Lalb_Chr05g0220741 Lupinus albus
Lalb_Chr09g0324001 Lupinus albus
Lalb_Chr09g0329641 Lupinus albus
Lalb_Chr16g0386211 Lupinus albus
Lj2g0008503 Lotus japonicus
Lj2P250T9 Lonicera japonica
Lj4g0007315 Lotus japonicus
Lj8A287T27 Lonicera japonica
Lj8A50T68 Lonicera japonica
Lsat_1_v5_gn_3_15981 Lactuca sativa
Lsat_1_v5_gn_6_89121 Lactuca sativa
Manes.15G171500 Manihot esculenta
Manes.17G020100 Manihot esculenta
MBI04_g44417_MAGBIO Magnolia biondii
MBI04_g45962_MAGBIO Magnolia biondii
MD06G1043600 Malus domestica
Medtr4g099060 Medicago truncatula
Medtr5g013690 Medicago truncatula
MELO3C003360.2 Cucumis melo
MELO3C013883.2 Cucumis melo
Migut.F00550 Erythranthe guttata
Migut.F01217 Erythranthe guttata
Nitab4.5_0000185g0300 Nicotiana tabacum
Nitab4.5_0000506g0240 Nicotiana tabacum
Nitab4.5_0001708g0030 Nicotiana tabacum
Nitab4.5_0007226g0020 Nicotiana tabacum
Nitab4.5_0008709g0030 Nicotiana tabacum
Nitab4.5_0009819g0010 Nicotiana tabacum
Nn1g00692 Nelumbo nucifera
Nn2g15044 Nelumbo nucifera
Oeu001362.3 Olea europaea
Oeu017311.1 Olea europaea
Oeu024267.1 Olea europaea
Oeu037542.1 Olea europaea
Oeu039358.1 Olea europaea
Os02g0246101 Oryza sativa ssp. japonica
Os02g0687500 Oryza sativa ssp. japonica
Os03g0126600 Oryza sativa ssp. japonica
Os03g0312500 Oryza sativa ssp. japonica
Os04g0402500 Oryza sativa ssp. japonica
Os05g0253700 Oryza sativa ssp. japonica
Os10g0565500 Oryza sativa ssp. japonica
Peaxi162Scf00084g00027 Petunia axillaris
Peaxi162Scf00102g00731 Petunia axillaris
Peaxi162Scf00190g00029 Petunia axillaris
PGR031G3665 Punica granatum
PGR042G2973 Punica granatum
PGSC0003DMG400001841 Solanum tuberosum
PGSC0003DMG400020510 Solanum tuberosum
PGSC0003DMG400026593 Solanum tuberosum
Phvul.002G002700 Phaseolus vulgaris
Phvul.003G227200 Phaseolus vulgaris
Potri.001G148600 Populus trichocarpa
Potri.003G085800 Populus trichocarpa
Prupe.2G192200 Prunus persica
Prupe.5G050300 Prunus persica
Prupe.6G165200 Prunus persica
Prupe.7G181900 Prunus persica
Prupe.8G197800 Prunus persica
Psat2g174360 Pisum sativum
Psat4g077520 Pisum sativum
PSO063G3541 Papaver somniferum
PSO782G0633 Papaver somniferum
QL12p007792 Quercus lobata
RcHm_v2.0_Chr7g0207871 Rosa chinensis
Rhsim07G0120500 Rhododendron simsii
Rhsim09G0187700 Rhododendron simsii
Sabra01G0118500 Salix brachista
Sabra03G0055700 Salix brachista
SalBow3G1281 Salvia bowleyana
Sc01g0007850 Simmondsia chinensis
Sed0015081 Sechium edule
Sed0019352 Sechium edule
Sed0020068 Sechium edule
SGA_v2.0_scaffold44G16604 Striga asiatica
SGA_v2.0_scaffold60G20858 Striga asiatica
SHI07578 Sapria himalayana
Solyc06g061020.3 Solanum lycopersicum
Solyc08g007120.3 Solanum lycopersicum
Solyc08g077460.3 Solanum lycopersicum
Sopen06g021170 Solanum pennellii
Sopen08g003070 Solanum pennellii
Sopen08g026050 Solanum pennellii
Sp1g28230 Schrenkiella parvula
Sp2g11860 Schrenkiella parvula
Sp7g16460 Schrenkiella parvula
TAR374G1463 Trochodendron aralioides
TAR375G0421 Trochodendron aralioides
TAR629G2559 Trochodendron aralioides
TAR636G3151 Trochodendron aralioides
THA.LOC104806686 Tarenaya hassleriana
THA.LOC104812822 Tarenaya hassleriana
THA.LOC104814702 Tarenaya hassleriana
Thecc.03G236500 Theobroma cacao
Thhalv10000973m.g Eutrema salsugineum
Thhalv10008231m.g Eutrema salsugineum
Thhalv10026644m.g Eutrema salsugineum
TPR.G19186 Trifolium pratense
TPR.G33935 Trifolium pratense
TWI60G0489 Tripterygium wilfordii
TWI81G0043 Tripterygium wilfordii
vmacro00369 Vaccinium macrocarpon
vmacro14113 Vaccinium macrocarpon
VMungo0251G2888 Vigna mungo
VMungo1215G2465 Vigna mungo
Zm00001eb023970 Zea mays
Zm00001eb084550 Zea mays
Zm00001eb084560 Zea mays
Zm00001eb103430 Zea mays
Zm00001eb179670 Zea mays
Zm00001eb187460 Zea mays
Zm00001eb242300 Zea mays
Zm00001eb242330 Zea mays
Zm00001eb251010 Zea mays
Zm00001eb320720 Zea mays
Zm00001eb351110 Zea mays
Zm00001eb390750 Zea mays
Zm00001eb421630 Zea mays
Zm00001eb421690 Zea mays
Zm00001eb429510 Zea mays

User provided reference genes

Program Settings