Gene: AT4G17680

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G17680
  • Transcript Identifier AT4G17680.2
  • Gene Type Coding gene
  • Location Chr4 : 9842903-9843703 : negative

Gene Family Information

  • ID HOM05D000410
  • #Genes/#Species 1238/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G17680.2
  • uniprot Q8L7G9

Descriptions

  • Description SBP (S-ribonuclease binding protein) family protein
  • Computational description SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT5G47050.1); Has 422 Blast hits to 421 proteins in 63 species: Archae - 0; Bacteria - 11; Metazoa - 35; Fungi - 13; Plants - 325; Viruses - 3; Other Eukaryotes - 35 (source: NCBI BLink).
  • Computational description SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT5G47050.1); Has 404 Blast hits to 403 proteins in 61 species: Archae - 0; Bacteria - 12; Metazoa - 34; Fungi - 6; Plants - 318; Viruses - 3; Other Eukaryotes - 31 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031347
IMP
Gene Ontologyregulation of defense response1
GO:0016567
IEA
GOA Databaseprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0004842
IBA
Gene Ontologyubiquitin-protein transferase activity3
GO:0046872
IEA
GOA Databasemetal ion binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017066 E3 ubiquitin-protein ligase BOI-like
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
35.1 not assigned.annotated