Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p10550 Brassica napus
A10p01020 Brassica napus
A10p11410 Brassica napus
Aa31LG1G10240 Aethionema arabicum
Aa31LG3G9910 Aethionema arabicum
Actinidia08709 Actinidia chinensis
Actinidia18687 Actinidia chinensis
Actinidia28287 Actinidia chinensis
Actinidia34279 Actinidia chinensis
Actinidia37068 Actinidia chinensis
Ah.07g204360 Amaranthus hybridus
Ah.13g070910 Amaranthus hybridus
AL1G11600 Arabidopsis lyrata
AL8G29250 Arabidopsis lyrata
Aqoxy4G02699 Aquilegia oxysepala
Aqoxy5G04367 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.351IJG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4C565J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IMC7YD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LMT1MP Arachis hypogaea
AT1G02270 Arabidopsis thaliana
AT5G54130 Arabidopsis thaliana
ATR0579G042 Amborella trichopoda
Atru.chr12.2471 Acer truncatum
Atru.chr5.802 Acer truncatum
AUR62001532 Chenopodium quinoa
AUR62005965 Chenopodium quinoa
AUR62020250 Chenopodium quinoa
AUR62028104 Chenopodium quinoa
BcaB05g22113 Brassica carinata
BcaB08g35762 Brassica carinata
BcaC03g14326 Brassica carinata
BcaC04g20384 Brassica carinata
BcaC05g24606 Brassica carinata
BcaC07g42322 Brassica carinata
BcaC07g42380 Brassica carinata
BcaC09g50637 Brassica carinata
BolC2t07892H Brassica oleracea
BolC5t28886H Brassica oleracea
BolC9t57297H Brassica oleracea
BraA02t06119Z Brassica rapa
BraA10t42380Z Brassica rapa
BraA10t43235Z Brassica rapa
C02p17610 Brassica napus
C05p01050 Brassica napus
C09p44240 Brassica napus
CANSAT21G1858 Cannabis sativa
CANSAT56G0944 Cannabis sativa
CARHR001560 Cardamine hirsuta
CARHR267320 Cardamine hirsuta
Carub.0001s0128 Capsella rubella
Carub.0008s1442 Capsella rubella
Ca_16793_v3 Cicer arietinum L.
Ca_16809_v3 Cicer arietinum L.
Ca_23485_v3 Cicer arietinum L.
Ca_26740_v3 Cicer arietinum L.
CBR_g37624 Chara braunii
CBR_g37626 Chara braunii
Cc02_g00690 Coffea canephora
CDE02G0183 Ceratophyllum demersum
CDE04G3340 Ceratophyllum demersum
Cfa003718 Carpinus fangiana
Cfa016142 Carpinus fangiana
Ciclev10020049m.g Citrus clementina
Ciclev10020139m.g Citrus clementina
CiPaw.01G086100 Carya illinoinensis
CiPaw.05G207200 Carya illinoinensis
ClCG07G009670 Citrullus lanatus
COL.COLO4_14386 Corchorus olitorius
COL.COLO4_23073 Corchorus olitorius
Cpa.g.sc3.171 Carica papaya
Cpa.g.sc57.69 Carica papaya
CsaV3_4G008700 Cucumis sativus L.
CSS0009553 Camellia sinensis var. sinensis
CSS0039940 Camellia sinensis var. sinensis
CSS0045098 Camellia sinensis var. sinensis
CSS0049255 Camellia sinensis var. sinensis
DCAR_006177 Daucus carota
DCAR_010567 Daucus carota
Dinv06624 Davidia involucrata
Dinv17288 Davidia involucrata
Dinv22799 Davidia involucrata
Dinv29201 Davidia involucrata
Duzib068G1190 Durio zibethinus
Duzib084G1409 Durio zibethinus
Duzib138G0358 Durio zibethinus
Duzib268G1611 Durio zibethinus
ECA232G4838 Erigeron canadensis
EL10Ac3g05149 Beta vulgaris
EL10Ac7g16325 Beta vulgaris
Eucgr.K00047 Eucalyptus grandis
Eucgr.K00454 Eucalyptus grandis
FAN01G1615 Fragaria x ananassa
FAN01G3084 Fragaria x ananassa
FAN03G0689 Fragaria x ananassa
FAN03G0988 Fragaria x ananassa
FAN03G1972 Fragaria x ananassa
FAN06G1051 Fragaria x ananassa
FAN06G1272 Fragaria x ananassa
FAN10G1524 Fragaria x ananassa
FAN10G1614 Fragaria x ananassa
FAN10G2506 Fragaria x ananassa
FAN10G3000 Fragaria x ananassa
FAN28G2060 Fragaria x ananassa
FvH4_7g18080 Fragaria vesca
FvH4_7g33080 Fragaria vesca
Glyma.02G222200 Glycine max
Glyma.04G226800 Glycine max
Glyma.06G138200 Glycine max
Glyma.07G047800 Glycine max
Glyma.16G016300 Glycine max
Gohir.A07G133300 Gossypium hirsutum
Gohir.A08G122800 Gossypium hirsutum
Gohir.A11G102500 Gossypium hirsutum
Gohir.D04G000010 Gossypium hirsutum
Gohir.D04G000600 Gossypium hirsutum
Gohir.D07G137800 Gossypium hirsutum
Gohir.D08G144200 Gossypium hirsutum
Gohir.D11G107000 Gossypium hirsutum
Gorai.001G149900 Gossypium raimondii
Gorai.004G148800 Gossypium raimondii
Gorai.007G114600 Gossypium raimondii
Gorai.012G001600 Gossypium raimondii
GSVIVG01027478001 Vitis vinifera
GSVIVG01036066001 Vitis vinifera
GSVIVG01038668001 Vitis vinifera
HanXRQChr07g0206581 Helianthus annuus
HanXRQChr15g0497001 Helianthus annuus
Haze_00317 Corylus avellana
Haze_15763 Corylus avellana
Hma1.2p1_0115F.1_g055610 Hydrangea macrophylla
Hma1.2p1_1178F.1_g264375 Hydrangea macrophylla
Hma1.2p1_1867F.1_g305910 Hydrangea macrophylla
Hma1.2p1_2789F.1_g328570 Hydrangea macrophylla
HPP92_014434 Vanilla planifolia
HPP92_022291 Vanilla planifolia
Hund09728 Selenicereus undatus
Hund18787 Selenicereus undatus
Hund21073 Selenicereus undatus
Lalb_Chr04g0254091 Lupinus albus
Lalb_Chr08g0239481 Lupinus albus
Lalb_Chr08g0239491 Lupinus albus
Lalb_Chr10g0100961 Lupinus albus
Lalb_Chr11g0067501 Lupinus albus
Lalb_Chr17g0344821 Lupinus albus
Lj1C1030G1 Lonicera japonica
Lj1g0021654 Lotus japonicus
Lj3A892T31 Lonicera japonica
Lj3g0000578 Lotus japonicus
LjContig00155g0021220 Lotus japonicus
Lsat_1_v5_gn_0_9740 Lactuca sativa
Lsat_1_v5_gn_2_134740 Lactuca sativa
Manes.01G044801 Manihot esculenta
Manes.01G238000 Manihot esculenta
Manes.05G005400 Manihot esculenta
Mapoly0104s0017 Marchantia polymorpha
MBI01_g04516_MAGBIO Magnolia biondii
MBI04_g27763_MAGBIO Magnolia biondii
MCO11G420 Micromonas commoda
MD01G1095200 Malus domestica
MD01G1230000 Malus domestica
MD01G1230100 Malus domestica
MD07G1163500 Malus domestica
MD07G1163800 Malus domestica
MD07G1164200 Malus domestica
MD07G1301900 Malus domestica
Medtr3g093070 Medicago truncatula
Medtr5g068820 Medicago truncatula
Medtr7g111640 Medicago truncatula
Medtr8g023830 Medicago truncatula
MELO3C024866.2 Cucumis melo
Migut.F00135 Erythranthe guttata
Migut.F00980 Erythranthe guttata
MSTRG.8598 Avicennia marina
Nitab4.5_0000021g0040 Nicotiana tabacum
Nitab4.5_0010776g0010 Nicotiana tabacum
Nn1g00472 Nelumbo nucifera
Nn3g18758 Nelumbo nucifera
Nn6g34776 Nelumbo nucifera
Oeu017366.1 Olea europaea
Oeu029331.1 Olea europaea
Oeu055401.1 Olea europaea
Oeu055413.1 Olea europaea
Os10g0203000 Oryza sativa ssp. japonica
Peaxi162Scf00542g00038 Petunia axillaris
Peaxi162Scf01447g00022 Petunia axillaris
PGR142G4003 Punica granatum
PGSC0003DMG401000554 Solanum tuberosum
Phvul.008G188900 Phaseolus vulgaris
Phvul.009G039100 Phaseolus vulgaris
Phvul.010G121200 Phaseolus vulgaris
Potri.002G182500 Populus trichocarpa
Potri.012G007600 Populus trichocarpa
Potri.014G108200 Populus trichocarpa
Potri.015G004200 Populus trichocarpa
PRCOL_00007248 Prasinoderma coloniale
Prupe.2G203200 Prunus persica
Prupe.2G320700 Prunus persica
Psat0s3022g0040 Pisum sativum
Psat4g164320 Pisum sativum
Psat5g070800 Pisum sativum
PSO063G7333 Papaver somniferum
PSO782G3313 Papaver somniferum
QL08p009073 Quercus lobata
QL08p048088 Quercus lobata
QL08p048095 Quercus lobata
QL09p006507 Quercus lobata
QL09p024396 Quercus lobata
RcHm_v2.0_Chr1g0361711 Rosa chinensis
RcHm_v2.0_Chr1g0383111 Rosa chinensis
Rhsim01G0202500 Rhododendron simsii
Rhsim03G0217100 Rhododendron simsii
Sabra02G0132800 Salix brachista
Sabra12G0004600 Salix brachista
Sabra12G0009000 Salix brachista
Sabra14G0079700 Salix brachista
Sabra15G0002700 Salix brachista
Sc13g0010600 Simmondsia chinensis
Sc19g0000460 Simmondsia chinensis
Sed0017970 Sechium edule
SGA_v2.0_scaffold1362G53926 Striga asiatica
SGA_v2.0_scaffold18G08481 Striga asiatica
SMO111G0223 Selaginella moellendorffii
SMO293G0004 Selaginella moellendorffii
SMO337G0079 Selaginella moellendorffii
Solyc03g080080.4 Solanum lycopersicum
Sopen03g021810 Solanum pennellii
Sp1g01340 Schrenkiella parvula
Sp6g16150 Schrenkiella parvula
TAR374G1195 Trochodendron aralioides
TAR375G0808 Trochodendron aralioides
TAR376G0909 Trochodendron aralioides
TAR636G3537 Trochodendron aralioides
THA.LOC104799939 Tarenaya hassleriana
THA.LOC104815906 Tarenaya hassleriana
THA.LOC104825163 Tarenaya hassleriana
THA.LOC104827359 Tarenaya hassleriana
Thecc.01G330500 Theobroma cacao
Thecc.03G210800 Theobroma cacao
Thhalv10007319m.g Eutrema salsugineum
Thhalv10013580m.g Eutrema salsugineum
TPR.G32771 Trifolium pratense
TPR.G35917 Trifolium pratense
TPR.G5830 Trifolium pratense
TWI14G0005 Tripterygium wilfordii
TWI39G0415 Tripterygium wilfordii
unitig_0.g2437 Utricularia gibba
vmacro06458 Vaccinium macrocarpon
vmacro14330 Vaccinium macrocarpon
VMungo0331G0015 Vigna mungo
VMungo0647G1781 Vigna mungo
VMungo1309G0347 Vigna mungo

User provided reference genes

Program Settings