Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p15280 Brassica napus
A02p26680 Brassica napus
A03p54910 Brassica napus
A05p24260 Brassica napus
A09p32790 Brassica napus
Aa31LG6G7220 Aethionema arabicum
Aa31LG6G7950 Aethionema arabicum
Aa31LG9G11850 Aethionema arabicum
Actinidia02522 Actinidia chinensis
Actinidia27309 Actinidia chinensis
Actinidia28220 Actinidia chinensis
Actinidia29365 Actinidia chinensis
Ah.05g170470 Amaranthus hybridus
AL1G47870 Arabidopsis lyrata
AL6G43980 Arabidopsis lyrata
AL6G43990 Arabidopsis lyrata
AL7G29290 Arabidopsis lyrata
Aqoxy5G01852 Aquilegia oxysepala
Aqoxy7G00064 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1IN0XH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.60J8GE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UV0H6R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WURL8V Arachis hypogaea
AT1G33480 Arabidopsis thaliana
AT4G10150 Arabidopsis thaliana
AT4G10160 Arabidopsis thaliana
AT4G24015 Arabidopsis thaliana
Atru.chr13.2582 Acer truncatum
Atru.chr9.1938 Acer truncatum
AUR62007008 Chenopodium quinoa
AUR62013394 Chenopodium quinoa
AUR62019872 Chenopodium quinoa
AUR62038545 Chenopodium quinoa
BcaB01g01459 Brassica carinata
BcaB05g23913 Brassica carinata
BcaC03g15605 Brassica carinata
BcaC03g16411 Brassica carinata
BcaC03g16413 Brassica carinata
BcaC08g43850 Brassica carinata
BcaC09g50923 Brassica carinata
BcaNung01107 Brassica carinata
BcaNung04249 Brassica carinata
BolC1t01848H Brassica oleracea
BolC2t10283H Brassica oleracea
BolC6t36384H Brassica oleracea
BolC7t45824H Brassica oleracea
BraA01t01471Z Brassica rapa
BraA02t07673Z Brassica rapa
BraA03t14556Z Brassica rapa
BraA05t21318Z Brassica rapa
BraA09t38814Z Brassica rapa
C01p19210 Brassica napus
C02p33830 Brassica napus
C02p42400 Brassica napus
C06p12330 Brassica napus
C07p53290 Brassica napus
CANSAT21G1707 Cannabis sativa
CARHR032920 Cardamine hirsuta
CARHR231420 Cardamine hirsuta
CARHR256670 Cardamine hirsuta
CARHR256680 Cardamine hirsuta
CARHR256690 Cardamine hirsuta
CARHR261240 Cardamine hirsuta
Carub.0001s3167 Capsella rubella
Carub.0006s2872 Capsella rubella
Carub.0007s1708 Capsella rubella
Ca_19799_v3 Cicer arietinum L.
Cc08_g16350 Coffea canephora
Cc10_g16100 Coffea canephora
CDE02G3866 Ceratophyllum demersum
Cfa012935 Carpinus fangiana
Ciclev10021842m.g Citrus clementina
Ciclev10024464m.g Citrus clementina
CiPaw.11G117600 Carya illinoinensis
CiPaw.12G080900 Carya illinoinensis
ClCG01G001780 Citrullus lanatus
ClCG08G001740 Citrullus lanatus
COL.COLO4_25065 Corchorus olitorius
Cpa.g.sc142.4 Carica papaya
Cpa.g.sc142.5 Carica papaya
Cpa.g.sc15.6 Carica papaya
CsaV3_5G001920 Cucumis sativus L.
CsaV3_5G039460 Cucumis sativus L.
CSS0002585 Camellia sinensis var. sinensis
CSS0003750 Camellia sinensis var. sinensis
CSS0007727 Camellia sinensis var. sinensis
CSS0008003 Camellia sinensis var. sinensis
CSS0024757 Camellia sinensis var. sinensis
CSS0026020 Camellia sinensis var. sinensis
CSS0038596 Camellia sinensis var. sinensis
CSS0039652 Camellia sinensis var. sinensis
CSS0041085 Camellia sinensis var. sinensis
DCAR_001172 Daucus carota
DCAR_002541 Daucus carota
DCAR_002542 Daucus carota
DCAR_002543 Daucus carota
DCAR_002544 Daucus carota
DCAR_010109 Daucus carota
DCAR_028618 Daucus carota
DCAR_030429 Daucus carota
Dinv37502 Davidia involucrata
Dinv38814 Davidia involucrata
Duzib116G0004 Durio zibethinus
Duzib116G0331 Durio zibethinus
ECA233G2409 Erigeron canadensis
ECA233G6093 Erigeron canadensis
ECA246G0663 Erigeron canadensis
ECA246G3802 Erigeron canadensis
EL10Ac1g01285 Beta vulgaris
EL10Ac5g12948 Beta vulgaris
Eucgr.D01770 Eucalyptus grandis
Eucgr.F04086 Eucalyptus grandis
FAN04G1292 Fragaria x ananassa
FAN08G2033 Fragaria x ananassa
FAN13G2692 Fragaria x ananassa
FAN18G1358 Fragaria x ananassa
FAN18G4267 Fragaria x ananassa
FAN19G2136 Fragaria x ananassa
FAN20G1107 Fragaria x ananassa
FAN24G0014 Fragaria x ananassa
FvH4_2g00300 Fragaria vesca
FvH4_5g11670 Fragaria vesca
Glyma.05G218700 Glycine max
Glyma.08G024800 Glycine max
Glyma.09G001600 Glycine max
Glyma.13G002800 Glycine max
Glyma.20G066300 Glycine max
Gohir.A03G080900 Gossypium hirsutum
Gohir.A08G229500 Gossypium hirsutum
Gohir.D02G103700 Gossypium hirsutum
Gohir.D08G249800 Gossypium hirsutum
Gorai.004G266400 Gossypium raimondii
Gorai.005G117800 Gossypium raimondii
GSVIVG01019585001 Vitis vinifera
GSVIVG01019592001 Vitis vinifera
GSVIVG01037142001 Vitis vinifera
HanXRQChr05g0150601 Helianthus annuus
HanXRQChr07g0190771 Helianthus annuus
HanXRQChr10g0316891 Helianthus annuus
Haze_09100 Corylus avellana
Haze_09101 Corylus avellana
Haze_14785 Corylus avellana
Haze_21295 Corylus avellana
Hma1.2p1_0016F.1_g010970 Hydrangea macrophylla
Hma1.2p1_0440F.1_g153540 Hydrangea macrophylla
HPP92_019417 Vanilla planifolia
Lalb_Chr05g0223981 Lupinus albus
Lalb_Chr09g0332221 Lupinus albus
Lalb_Chr09g0332231 Lupinus albus
Lalb_Chr16g0390721 Lupinus albus
Lalb_Chr19g0131911 Lupinus albus
Lj2A163T68 Lonicera japonica
Lj3g0023405 Lotus japonicus
Lj4g0025211 Lotus japonicus
Lj6A699T66 Lonicera japonica
Lj6g0016186 Lotus japonicus
Lj9A695T55 Lonicera japonica
Lsat_1_v5_gn_6_109840 Lactuca sativa
Lsat_1_v5_gn_6_71661 Lactuca sativa
Lsat_1_v5_gn_6_9501 Lactuca sativa
Manes.01G052600 Manihot esculenta
Manes.02G007100 Manihot esculenta
Manes.02G200348 Manihot esculenta
Manes.18G109000 Manihot esculenta
MBI06_g10868_MAGBIO Magnolia biondii
MBI06_g32151_MAGBIO Magnolia biondii
MBI07_g24778_MAGBIO Magnolia biondii
MD05G1006000 Malus domestica
MD06G1111300 Malus domestica
MD14G1132500 Malus domestica
Medtr3g081030 Medicago truncatula
Medtr4g030070 Medicago truncatula
MELO3C005760.2 Cucumis melo
MELO3C022123.2 Cucumis melo
Migut.C01400 Erythranthe guttata
Migut.G00009 Erythranthe guttata
Migut.O00395 Erythranthe guttata
MSTRG.1610 Avicennia marina
Nitab4.5_0000079g0170 Nicotiana tabacum
Nitab4.5_0000798g0150 Nicotiana tabacum
Nitab4.5_0001489g0050 Nicotiana tabacum
Nitab4.5_0002367g0040 Nicotiana tabacum
Nitab4.5_0007335g0030 Nicotiana tabacum
Nitab4.5_0007657g0010 Nicotiana tabacum
Nitab4.5_0015042g0020 Nicotiana tabacum
Nn1g00280 Nelumbo nucifera
Nn3g18960 Nelumbo nucifera
Nn5g27230 Nelumbo nucifera
Oeu020628.1 Olea europaea
Oeu022695.1 Olea europaea
Oeu030887.1 Olea europaea
Os02g0557300 Oryza sativa ssp. japonica
Peaxi162Scf00074g00527 Petunia axillaris
Peaxi162Scf00078g01140 Petunia axillaris
Peaxi162Scf00818g00319 Petunia axillaris
PGR031G3866 Punica granatum
PGSC0003DMG400012137 Solanum tuberosum
PGSC0003DMG400033135 Solanum tuberosum
Phvul.002G300500 Phaseolus vulgaris
Phvul.006G000700 Phaseolus vulgaris
Phvul.011G215400 Phaseolus vulgaris
Potri.001G088400 Populus trichocarpa
Potri.003G142600 Populus trichocarpa
Potri.013G095100 Populus trichocarpa
Prupe.5G124100 Prunus persica
Prupe.8G002900 Prunus persica
Psat5g108400 Pisum sativum
Psat7g229760 Pisum sativum
PSO135G0157 Papaver somniferum
PSO210G5455 Papaver somniferum
PSO384G4716 Papaver somniferum
PSO761G0411 Papaver somniferum
QL02p025990 Quercus lobata
QL02p029662 Quercus lobata
QL09p001255 Quercus lobata
RcHm_v2.0_Chr6g0249581 Rosa chinensis
RcHm_v2.0_Chr7g0186121 Rosa chinensis
Rhsim07G0081000 Rhododendron simsii
Sabra01G0064700 Salix brachista
Sabra13G0081100 Salix brachista
Sc01g0010410 Simmondsia chinensis
Sed0006608 Sechium edule
Sed0016681 Sechium edule
Sed0023160 Sechium edule
Sed0026122 Sechium edule
SGA_v2.0_scaffold64G22042 Striga asiatica
SMO111G0139 Selaginella moellendorffii
SMO356G0635 Selaginella moellendorffii
SMO358G0642 Selaginella moellendorffii
SMO367G0039 Selaginella moellendorffii
SMO367G0810 Selaginella moellendorffii
Solyc06g064440.3 Solanum lycopersicum
Solyc08g082680.3 Solanum lycopersicum
Sopen06g022910 Solanum pennellii
Sopen08g030900 Solanum pennellii
Sp1g28930 Schrenkiella parvula
Sp6g07260 Schrenkiella parvula
Sp7g21970 Schrenkiella parvula
TAR628G0190 Trochodendron aralioides
TAR629G0754 Trochodendron aralioides
TAR636G3445 Trochodendron aralioides
THA.LOC104813084 Tarenaya hassleriana
THA.LOC104815780 Tarenaya hassleriana
Thecc.08G165900 Theobroma cacao
Thhalv10009296m.g Eutrema salsugineum
Thhalv10026391m.g Eutrema salsugineum
Thhalv10028921m.g Eutrema salsugineum
TPR.G33602 Trifolium pratense
TPR.G4399 Trifolium pratense
TWI12G1094 Tripterygium wilfordii
vmacro13884 Vaccinium macrocarpon
VMungo0251G0743 Vigna mungo
VMungo0540G0071 Vigna mungo
VMungo1127G1869 Vigna mungo
Zm00001eb243920 Zea mays

User provided reference genes

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