Gene: AT4G10160

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G10160
  • Transcript Identifier AT4G10160.1
  • Gene Type Coding gene
  • Location Chr4 : 6336023-6337301 : positive

Gene Family Information

  • ID HOM05D000086
  • #Genes/#Species 3623/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G10160.1
  • uniprot Q9SN27

Descriptions

  • Description RING/U-box superfamily protein
  • Computational description RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G10150.1); Has 9335 Blast hits to 9314 proteins in 290 species: Archae - 0; Bacteria - 6; Metazoa - 2290; Fungi - 731; Plants - 4944; Viruses - 53; Other Eukaryotes - 1311 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IDA
IEA
Gene Ontologyprotein ubiquitination1
GO:0006511
IBA
Gene Ontologyubiquitin-dependent protein catabolic process2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IDA
Gene Ontologyubiquitin-protein transferase activity1
GO:0061630
IBA
Gene Ontologyubiquitin protein ligase activity2
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.3.3.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ATL-subclass ligase