Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p16940 Brassica napus
A05p16950 Brassica napus
A08p11650 Brassica napus
Aa31LG8G5000 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2190 Anthoceros agrestis
Actinidia06938 Actinidia chinensis
Actinidia06941 Actinidia chinensis
Actinidia12242 Actinidia chinensis
Ah.16g104170 Amaranthus hybridus
AL7G40620 Arabidopsis lyrata
Aqoxy6G00091 Aquilegia oxysepala
Aqoxy6G00093 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.17MV76 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2U4GNC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6EYS0J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U5EGUK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z8RNIG Arachis hypogaea
AT4G15093 Arabidopsis thaliana
ATR1136G069 Amborella trichopoda
Atru.chr3.1446 Acer truncatum
AUR62000599 Chenopodium quinoa
AUR62000600 Chenopodium quinoa
AUR62000602 Chenopodium quinoa
AUR62000603 Chenopodium quinoa
AUR62000604 Chenopodium quinoa
AUR62006948 Chenopodium quinoa
AUR62006951 Chenopodium quinoa
AUR62006953 Chenopodium quinoa
AUR62006954 Chenopodium quinoa
AUR62006955 Chenopodium quinoa
AUR62006956 Chenopodium quinoa
AUR62012187 Chenopodium quinoa
AUR62012345 Chenopodium quinoa
AUR62012347 Chenopodium quinoa
AUR62012349 Chenopodium quinoa
AUR62022991 Chenopodium quinoa
AUR62022994 Chenopodium quinoa
BcaB02g07840 Brassica carinata
BcaB02g07841 Brassica carinata
BcaB02g07842 Brassica carinata
BcaB04g18282 Brassica carinata
BcaC01g02242 Brassica carinata
BcaC02g09429 Brassica carinata
BcaC05g27286 Brassica carinata
BcaC05g27287 Brassica carinata
BcaC07g37870 Brassica carinata
BcaC07g37874 Brassica carinata
BcaC08g44253 Brassica carinata
BcaC08g44254 Brassica carinata
BcaC09g49545 Brassica carinata
BcaC09g50122 Brassica carinata
BolC1t02805H Brassica oleracea
BolC1t03496H Brassica oleracea
BolC6t36861H Brassica oleracea
BolC6t36862H Brassica oleracea
BolC8t48262H Brassica oleracea
BolC8t48267H Brassica oleracea
BolC8t50892H Brassica oleracea
BolSC21t60279H Brassica oleracea
BraA05t20601Z Brassica rapa
BraA05t20602Z Brassica rapa
BraA08t33159Z Brassica rapa
C01p28780 Brassica napus
C01p35390 Brassica napus
C03p67490 Brassica napus
C04p42530 Brassica napus
C06p16590 Brassica napus
C06p16600 Brassica napus
C08p32810 Brassica napus
CAN.G1497.14 Capsicum annuum
CAN.G84.44 Capsicum annuum
CANSAT11G1626 Cannabis sativa
CARHR221830 Cardamine hirsuta
Carub.0007s2690 Capsella rubella
Carub.0223s0002 Capsella rubella
Ca_09905_v3 Cicer arietinum L.
Ca_25250_v3 Cicer arietinum L.
Ca_28810_v3 Cicer arietinum L.
CBR_g30352 Chara braunii
Cc07_g20640 Coffea canephora
Cc11_g03920 Coffea canephora
CDE02G1383 Ceratophyllum demersum
Cfa020927 Carpinus fangiana
Cfa027285 Carpinus fangiana
Ciclev10026119m.g Citrus clementina
Ciclev10026292m.g Citrus clementina
Ciclev10027116m.g Citrus clementina
CiPaw.04G082800 Carya illinoinensis
CiPaw.15G185600 Carya illinoinensis
ClCG04G002700 Citrullus lanatus
ClCG04G002740 Citrullus lanatus
COL.COLO4_03648 Corchorus olitorius
COL.COLO4_03649 Corchorus olitorius
COL.COLO4_33520 Corchorus olitorius
Cpa.g.sc248.1 Carica papaya
Cre09.g408600 Chlamydomonas reinhardtii
CsaV3_4G029970 Cucumis sativus L.
CSS0010954 Camellia sinensis var. sinensis
CSS0016605 Camellia sinensis var. sinensis
CSS0026948 Camellia sinensis var. sinensis
CSS0045515 Camellia sinensis var. sinensis
DCAR_017114 Daucus carota
Dinv12782 Davidia involucrata
Duzib147G1181 Durio zibethinus
Duzib187G1955 Durio zibethinus
ECA233G4886 Erigeron canadensis
EL10Ac2g04269 Beta vulgaris
EL10Ac4g09719 Beta vulgaris
EL10Ac4g09722 Beta vulgaris
EL10Ac4g09723 Beta vulgaris
EL10Ac4g09727 Beta vulgaris
EL10Ac4g09781 Beta vulgaris
Eucgr.I00023 Eucalyptus grandis
FAN05G2696 Fragaria x ananassa
FAN09G0822 Fragaria x ananassa
FAN14G5765 Fragaria x ananassa
FAN19G3129 Fragaria x ananassa
FAN23G0200 Fragaria x ananassa
FAN26G3408 Fragaria x ananassa
FvH4_1g23880 Fragaria vesca
FvH4_6g30880 Fragaria vesca
Glyma.09G156900 Glycine max
Glyma.09G157000 Glycine max
Glyma.09G157100 Glycine max
Glyma.16G207700 Glycine max
Glyma.16G207800 Glycine max
Glyma.20G214400 Glycine max
Gohir.A05G374800 Gossypium hirsutum
Gohir.A05G374850 Gossypium hirsutum
Gohir.D04G040900 Gossypium hirsutum
Gorai.012G046100 Gossypium raimondii
GSVIVG01000251001 Vitis vinifera
GSVIVG01006088001 Vitis vinifera
GSVIVG01018544001 Vitis vinifera
GSVIVG01033293001 Vitis vinifera
HanXRQChr10g0279881 Helianthus annuus
HanXRQChr10g0279891 Helianthus annuus
HanXRQChr13g0388061 Helianthus annuus
HanXRQChr13g0388501 Helianthus annuus
HanXRQChr13g0388511 Helianthus annuus
HanXRQChr13g0388651 Helianthus annuus
HanXRQChr13g0390031 Helianthus annuus
HanXRQChr13g0390041 Helianthus annuus
HanXRQChr15g0469091 Helianthus annuus
Haze_19359 Corylus avellana
Haze_26813 Corylus avellana
Hma1.2p1_0296F.1_g116820 Hydrangea macrophylla
HPP92_017991 Vanilla planifolia
HPP92_017992 Vanilla planifolia
HPP92_026698 Vanilla planifolia
HPP92_026699 Vanilla planifolia
Hund07190 Selenicereus undatus
Hund21766 Selenicereus undatus
Hund21767 Selenicereus undatus
Lalb_Chr03g0033311 Lupinus albus
Lalb_Chr03g0033321 Lupinus albus
Lalb_Chr03g0033331 Lupinus albus
Lj2C604G12 Lonicera japonica
Lj2g0004346 Lotus japonicus
Lsat_1_v5_gn_5_71661 Lactuca sativa
Manes.13G154200 Manihot esculenta
Mapoly0009s0151 Marchantia polymorpha
MBI03_g18678_MAGBIO Magnolia biondii
MBI06_g38943_MAGBIO Magnolia biondii
MCO11G304 Micromonas commoda
MD00G1165300 Malus domestica
MD05G1186100 Malus domestica
MD15G1340700 Malus domestica
Medtr1g077030 Medicago truncatula
Medtr6g036660 Medicago truncatula
Medtr6g064960 Medicago truncatula
MELO3C003277.2 Cucumis melo
Migut.A01171 Erythranthe guttata
Migut.D02189 Erythranthe guttata
MSTRG.21141 Avicennia marina
MSTRG.24845 Avicennia marina
Nitab4.5_0001789g0120 Nicotiana tabacum
Nitab4.5_0004653g0020 Nicotiana tabacum
Nn1g08416 Nelumbo nucifera
Nn5g27826 Nelumbo nucifera
Nn8g39989 Nelumbo nucifera
Oeu008495.1 Olea europaea
Oeu046371.3 Olea europaea
Os01g0878800 Oryza sativa ssp. japonica
Os01g0878900 Oryza sativa ssp. japonica
Peaxi162Scf00819g00033 Petunia axillaris
Peaxi162Scf00819g00414 Petunia axillaris
PGR102G1103 Punica granatum
PGSC0003DMG400025377 Solanum tuberosum
PGSC0003DMG400042273 Solanum tuberosum
Phvul.003G113200 Phaseolus vulgaris
Phvul.004G132200 Phaseolus vulgaris
Phvul.004G132500 Phaseolus vulgaris
Potri.004G135200 Populus trichocarpa
Potri.004G135300 Populus trichocarpa
Potri.018G136800 Populus trichocarpa
Potri.T045400 Populus trichocarpa
Pp3c2_31930 Physcomitrium patens
Prupe.6G161400 Prunus persica
Psat1g113640 Pisum sativum
Psat6g112000 Pisum sativum
PSO170G0305 Papaver somniferum
PSO170G0519 Papaver somniferum
PSO170G0604 Papaver somniferum
PSO170G4816 Papaver somniferum
PSO170G6681 Papaver somniferum
PSO407G0213 Papaver somniferum
PSO782G1758 Papaver somniferum
PSO782G2257 Papaver somniferum
QL10p037707 Quercus lobata
RcHm_v2.0_Chr2g0119801 Rosa chinensis
RcHm_v2.0_Chr2g0119841 Rosa chinensis
RcHm_v2.0_Chr2g0137351 Rosa chinensis
RcHm_v2.0_Chr6g0259131 Rosa chinensis
Rhsim02G0005600 Rhododendron simsii
Rhsim06G0044200 Rhododendron simsii
Rhsim06G0044300 Rhododendron simsii
Sabra04G0082700 Salix brachista
Sabra04G0082800 Salix brachista
Sabra19G0000400 Salix brachista
Sabra19G0000600 Salix brachista
Sabra19G0010400 Salix brachista
Sabra19G0012200 Salix brachista
Sabra19G0012300 Salix brachista
SalBow3G0901 Salvia bowleyana
SalBow6G4945 Salvia bowleyana
Sc09g0001950 Simmondsia chinensis
Sed0023977 Sechium edule
SEGI_23635 Sequoiadendron giganteum
SEGI_39959 Sequoiadendron giganteum
SGA_v2.0_scaffold36G14302 Striga asiatica
SGA_v2.0_scaffold97G29182 Striga asiatica
SMO270G0038 Selaginella moellendorffii
Solyc01g090180.4 Solanum lycopersicum
Solyc11g072550.2 Solanum lycopersicum
Sopen01g035970 Solanum pennellii
Sopen11g030200 Solanum pennellii
Sp7g13330 Schrenkiella parvula
TAR376G0867 Trochodendron aralioides
TAR636G0298 Trochodendron aralioides
TAR636G3417 Trochodendron aralioides
THA.LOC104803673 Tarenaya hassleriana
Thecc.01G145900 Theobroma cacao
Thhalv10025974m.g Eutrema salsugineum
TPR.G16613 Trifolium pratense
TPR.G28472 Trifolium pratense
TPR.G5801 Trifolium pratense
TWI31G1220 Tripterygium wilfordii
TWI79G0511 Tripterygium wilfordii
TWI79G1450 Tripterygium wilfordii
unitig_748.g7546 Utricularia gibba
vmacro15196 Vaccinium macrocarpon
vmacro15197 Vaccinium macrocarpon
vmacro15198 Vaccinium macrocarpon
VMungo0464G1001 Vigna mungo
VMungo0464G1198 Vigna mungo
Zm00001eb145870 Zea mays
Zm00001eb366290 Zea mays

User provided reference genes

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