Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p18610 Brassica napus
A03p57290 Brassica napus
A08p37270 Brassica napus
A10p02150 Brassica napus
A10p11510 Brassica napus
Aa31LG1G20960 Aethionema arabicum
Aa31LG3G10170 Aethionema arabicum
Aa31LG5G10080 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2828 Anthoceros agrestis
Actinidia09867 Actinidia chinensis
Actinidia11050 Actinidia chinensis
Actinidia18758 Actinidia chinensis
Actinidia26817 Actinidia chinensis
Actinidia35258 Actinidia chinensis
Actinidia35259 Actinidia chinensis
Ah.01g015280 Amaranthus hybridus
Ah.04g165080 Amaranthus hybridus
Ah.06g183870 Amaranthus hybridus
AL1072U10010 Arabidopsis lyrata
AL1G13130 Arabidopsis lyrata
AL7G25330 Arabidopsis lyrata
AL8G29420 Arabidopsis lyrata
Aqoxy1G02576 Aquilegia oxysepala
Aqoxy2G01526 Aquilegia oxysepala
Aqoxy3G01807 Aquilegia oxysepala
Aqoxy4G01174 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2W1XFU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9Z13IR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MDXN6U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S4AEC7 Arachis hypogaea
AT1G03630 Arabidopsis thaliana
AT4G27440 Arabidopsis thaliana
AT5G54190 Arabidopsis thaliana
ATR0680G127 Amborella trichopoda
Atru.chr2.1931 Acer truncatum
Atru.chr2.2747 Acer truncatum
Atru.chr6.3012 Acer truncatum
Atru.chr9.1813 Acer truncatum
AUR62037335 Chenopodium quinoa
AUR62042480 Chenopodium quinoa
BcaB02g06912 Brassica carinata
BcaC05g24516 Brassica carinata
BcaC06g32690 Brassica carinata
BcaC07g36948 Brassica carinata
BcaNung03026 Brassica carinata
BolC1t02306H Brassica oleracea
BolC7t46028H Brassica oleracea
BolC8t46871H Brassica oleracea
BolC9t57321H Brassica oleracea
BolC9t57322H Brassica oleracea
BraA01t01811Z Brassica rapa
BraA03t14795Z Brassica rapa
BraA08t35624Z Brassica rapa
BraA10t42485Z Brassica rapa
BraA10t43245Z Brassica rapa
C01p23630 Brassica napus
C05p02060 Brassica napus
C07p55490 Brassica napus
C08p00740 Brassica napus
C09p44490 Brassica napus
CAN.G1110.49 Capsicum annuum
CAN.G248.37 Capsicum annuum
CAN.G708.4 Capsicum annuum
CANSAT56G1495 Cannabis sativa
CARHR002970 Cardamine hirsuta
CARHR235120 Cardamine hirsuta
CARHR267410 Cardamine hirsuta
Carub.0001s0275 Capsella rubella
Carub.0007s1341 Capsella rubella
Carub.0008s1451 Capsella rubella
Cc05_g06850 Coffea canephora
Cc05_g12370 Coffea canephora
CDE01G0453 Ceratophyllum demersum
CDE02G0705 Ceratophyllum demersum
CDE09G0764 Ceratophyllum demersum
CDE11G0861 Ceratophyllum demersum
Cfa014584 Carpinus fangiana
Cfa020546 Carpinus fangiana
Ciclev10008520m.g Citrus clementina
CiPaw.03G174600 Carya illinoinensis
CiPaw.11G173400 Carya illinoinensis
ClCG02G017530 Citrullus lanatus
ClCG11G018220 Citrullus lanatus
COL.COLO4_06983 Corchorus olitorius
COL.COLO4_09438 Corchorus olitorius
Cpa.g.sc34.133 Carica papaya
Cpa.g.sc80.29 Carica papaya
Cre01.g015350 Chlamydomonas reinhardtii
CsaV3_4G033870 Cucumis sativus L.
CSS0008189 Camellia sinensis var. sinensis
CSS0033593 Camellia sinensis var. sinensis
CSS0041527 Camellia sinensis var. sinensis
DCAR_013086 Daucus carota
DCAR_021236 Daucus carota
Dinv04324 Davidia involucrata
Dinv08315 Davidia involucrata
Dinv23666 Davidia involucrata
Duzib213G0918 Durio zibethinus
Duzib268G1508 Durio zibethinus
ECA236G2491 Erigeron canadensis
ECA246G0770 Erigeron canadensis
ECA246G2795 Erigeron canadensis
EL10Ac4g08118 Beta vulgaris
EL10Ac9g20697 Beta vulgaris
Eucgr.A01801 Eucalyptus grandis
Eucgr.F01098 Eucalyptus grandis
FAN11G1750 Fragaria x ananassa
FAN16G0004 Fragaria x ananassa
FAN21G2546 Fragaria x ananassa
FAN25G2726 Fragaria x ananassa
FvH4_3g20600 Fragaria vesca
Glyma.06G247100 Glycine max
Glyma.12G150400 Glycine max
Glyma.12G222200 Glycine max
Gohir.1Z049412 Gossypium hirsutum
Gohir.A04G024700 Gossypium hirsutum
Gohir.A04G104700 Gossypium hirsutum
Gohir.A13G145100 Gossypium hirsutum
Gohir.D04G144500 Gossypium hirsutum
Gohir.D05G359200 Gossypium hirsutum
Gohir.D13G149866 Gossypium hirsutum
Gohir.D13G149932 Gossypium hirsutum
Gorai.009G433900 Gossypium raimondii
Gorai.012G130500 Gossypium raimondii
Gorai.013G167700 Gossypium raimondii
GSVIVG01014388001 Vitis vinifera
GSVIVG01030386001 Vitis vinifera
HanXRQChr05g0156741 Helianthus annuus
HanXRQChr09g0260041 Helianthus annuus
HanXRQChr11g0328371 Helianthus annuus
HanXRQChr17g0542671 Helianthus annuus
HanXRQChr17g0542691 Helianthus annuus
Haze_09475 Corylus avellana
Haze_09479 Corylus avellana
Haze_13136 Corylus avellana
Hma1.2p1_0148F.1_g066230 Hydrangea macrophylla
Hma1.2p1_0540F.1_g174650 Hydrangea macrophylla
HPP92_007332 Vanilla planifolia
HPP92_022206 Vanilla planifolia
HPP92_022208 Vanilla planifolia
HPP92_022209 Vanilla planifolia
Hund07977 Selenicereus undatus
Hund22952 Selenicereus undatus
Lalb_Chr03g0030561 Lupinus albus
Lalb_Chr20g0109721 Lupinus albus
Lj1A727T55 Lonicera japonica
Lj1C727G5 Lonicera japonica
Lj1C730T15 Lonicera japonica
Lj1C848G9 Lonicera japonica
Lj3g0024751 Lotus japonicus
Lj3g0027304 Lotus japonicus
Lj8A158T81 Lonicera japonica
Lsat_1_v5_gn_3_41481 Lactuca sativa
Lsat_1_v5_gn_5_6580 Lactuca sativa
Lsat_1_v5_gn_7_105400 Lactuca sativa
Manes.03G113300 Manihot esculenta
Manes.13G148200 Manihot esculenta
Manes.15G085400 Manihot esculenta
Mapoly0030s0118 Marchantia polymorpha
MBI17_g03754_MAGBIO Magnolia biondii
MBI18_g17023_MAGBIO Magnolia biondii
MCO11G186 Micromonas commoda
MD03G1223800 Malus domestica
MD11G1241700 Malus domestica
Medtr2g079710 Medicago truncatula
MELO3C013592.2 Cucumis melo
MELO3C016714.2 Cucumis melo
Migut.H01066 Erythranthe guttata
Migut.H01922 Erythranthe guttata
Migut.M00857 Erythranthe guttata
MSTRG.12919 Avicennia marina
MSTRG.14205 Avicennia marina
Nitab4.5_0000207g0190 Nicotiana tabacum
Nitab4.5_0000512g0200 Nicotiana tabacum
Nitab4.5_0000662g0160 Nicotiana tabacum
Nitab4.5_0001320g0160 Nicotiana tabacum
Nitab4.5_0002526g0100 Nicotiana tabacum
Nitab4.5_0009946g0010 Nicotiana tabacum
Nn1g04004 Nelumbo nucifera
Nn1g06627 Nelumbo nucifera
Oeu019346.1 Olea europaea
Oeu030443.1 Olea europaea
Os04g0678700 Oryza sativa ssp. japonica
Os10g0496900 Oryza sativa ssp. japonica
Peaxi162Scf00000g43015 Petunia axillaris
Peaxi162Scf00027g00303 Petunia axillaris
Peaxi162Scf00132g00524 Petunia axillaris
PGR042G2295 Punica granatum
PGR083G2838 Punica granatum
PGSC0003DMG400015356 Solanum tuberosum
PGSC0003DMG400018351 Solanum tuberosum
PGSC0003DMG400025007 Solanum tuberosum
Phvul.005G083700 Phaseolus vulgaris
Phvul.011G148900 Phaseolus vulgaris
Potri.001G403300 Populus trichocarpa
Potri.011G122400 Populus trichocarpa
Potri.013G135500 Populus trichocarpa
Pp3c12_20650 Physcomitrium patens
Pp3c4_8470 Physcomitrium patens
PRCOL_00000553 Prasinoderma coloniale
Prupe.4G185700 Prunus persica
Psat5g245240 Pisum sativum
PSO017G0302 Papaver somniferum
PSO210G7180 Papaver somniferum
PSO541G1088 Papaver somniferum
PSO675G0206 Papaver somniferum
PSO832G2109 Papaver somniferum
PSO832G4538 Papaver somniferum
QL08p019739 Quercus lobata
QL08p038222 Quercus lobata
RcHm_v2.0_Chr5g0034621 Rosa chinensis
Rhsim04G0019500 Rhododendron simsii
Rhsim06G0147100 Rhododendron simsii
Rhsim06G0196300 Rhododendron simsii
Sabra11G0108200 Salix brachista
Sabra13G0114700 Salix brachista
SalBow1G7186 Salvia bowleyana
SalBow7G2695 Salvia bowleyana
Sc03g0009770 Simmondsia chinensis
Sc03g0009840 Simmondsia chinensis
Sc12g0002910 Simmondsia chinensis
Sed0001792 Sechium edule
Sed0015566 Sechium edule
SEGI_24623 Sequoiadendron giganteum
SGA_v2.0_scaffold109G31108 Striga asiatica
SGA_v2.0_scaffold73G24295 Striga asiatica
SMO356G0456 Selaginella moellendorffii
Solyc07g054210.3 Solanum lycopersicum
Solyc10g006900.3 Solanum lycopersicum
Solyc12g013710.2 Solanum lycopersicum
Sopen07g028140 Solanum pennellii
Sopen10g002810 Solanum pennellii
Sopen12g007060 Solanum pennellii
Sp1g02540 Schrenkiella parvula
Sp6g16250 Schrenkiella parvula
Sp7g25390 Schrenkiella parvula
TAR627G0578 Trochodendron aralioides
TAR629G0451 Trochodendron aralioides
THA.LOC104799920 Tarenaya hassleriana
THA.LOC104801180 Tarenaya hassleriana
Thecc.02G176900 Theobroma cacao
Thecc.07G076700 Theobroma cacao
Thhalv10007802m.g Eutrema salsugineum
Thhalv10025367m.g Eutrema salsugineum
TPR.G38997 Trifolium pratense
TWI36G0020 Tripterygium wilfordii
TWI38G0249 Tripterygium wilfordii
TWI38G0286 Tripterygium wilfordii
unitig_0.g2262 Utricularia gibba
unitig_52.g17402 Utricularia gibba
unitig_749.g13956 Utricularia gibba
vmacro09544 Vaccinium macrocarpon
vmacro11837 Vaccinium macrocarpon
vmacro12280 Vaccinium macrocarpon
VMungo1080G1462 Vigna mungo
VMungo1127G2085 Vigna mungo
Zm00001eb044650 Zea mays
Zm00001eb066060 Zea mays
Zm00001eb220940 Zea mays

User provided reference genes

Program Settings