Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p06300 Brassica napus
A03p61160 Brassica napus
A04p19580 Brassica napus
A05p45070 Brassica napus
A08p18370 Brassica napus
A09p55790 Brassica napus
Aa31LG2G18110 Aethionema arabicum
Aa31LG5G12720 Aethionema arabicum
Aa31sc188G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2330 Anthoceros agrestis
AL3G11440 Arabidopsis lyrata
AL4G16460 Arabidopsis lyrata
AL7G19910 Arabidopsis lyrata
Aqoxy3G03657 Aquilegia oxysepala
Aqoxy7G03496 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2YK8S2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6X7L7L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LH3S7N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N7IJYH Arachis hypogaea
AT2G25210 Arabidopsis thaliana
AT3G02190 Arabidopsis thaliana
AT4G31985 Arabidopsis thaliana
ATR0629G092 Amborella trichopoda
BcaB03g12729 Brassica carinata
BcaB06g28046 Brassica carinata
BcaC01g01042 Brassica carinata
BcaC02g08363 Brassica carinata
BcaC05g30331 Brassica carinata
BcaC07g40882 Brassica carinata
BcaC09g47841 Brassica carinata
BcaNung06287 Brassica carinata
BcaNung06288 Brassica carinata
BcaNung06489 Brassica carinata
BcaNung06490 Brassica carinata
BcaNung06493 Brassica carinata
BcaNung06494 Brassica carinata
BolC1t05679H Brassica oleracea
BolC3t21061H Brassica oleracea
BolC4t27057H Brassica oleracea
BolC5t35101H Brassica oleracea
BolC7t46350H Brassica oleracea
BolC8t51448H Brassica oleracea
BraA03t15154Z Brassica rapa
BraA03t15160Z Brassica rapa
BraA04t17551Z Brassica rapa
BraA05t23154Z Brassica rapa
BraA08t33794Z Brassica rapa
BraA09t40981Z Brassica rapa
C01p06940 Brassica napus
C04p55190 Brassica napus
C07p59020 Brassica napus
C08p38790 Brassica napus
C09p75570 Brassica napus
CAN.G520.33 Capsicum annuum
CANSAT11G0190 Cannabis sativa
CANSAT54G0281 Cannabis sativa
CARHR021550 Cardamine hirsuta
CARHR076160 Cardamine hirsuta
CARHR116410 Cardamine hirsuta
CARHR239880 Cardamine hirsuta
Carub.0003s0131 Capsella rubella
Carub.0004s0481 Capsella rubella
Carub.0007s0857 Capsella rubella
Ca_13049_v3 Cicer arietinum L.
Ca_15762_v3 Cicer arietinum L.
Ca_26564_v3 Cicer arietinum L.
Cc00_g06980 Coffea canephora
Cc00_g29450 Coffea canephora
Cc00_g30820 Coffea canephora
Cc06_g23380 Coffea canephora
Cc07_g04360 Coffea canephora
Cc07_g11870 Coffea canephora
Ciclev10010138m.g Citrus clementina
Ciclev10023935m.g Citrus clementina
CiPaw.07G227600 Carya illinoinensis
CiPaw.15G171400 Carya illinoinensis
CiPaw.16G116500 Carya illinoinensis
ClCG05G009580 Citrullus lanatus
ClCG05G016540 Citrullus lanatus
ClCG08G013600 Citrullus lanatus
COL.COLO4_00050 Corchorus olitorius
COL.COLO4_11959 Corchorus olitorius
COL.COLO4_18741 Corchorus olitorius
COL.COLO4_18929 Corchorus olitorius
Cpa.g.sc5.293 Carica papaya
Cpa.g.sc532.3 Carica papaya
CsaV3_1G029590 Cucumis sativus L.
CsaV3_1G038440 Cucumis sativus L.
CsaV3_2G032350 Cucumis sativus L.
CsaV3_4G022130 Cucumis sativus L.
CsaV3_4G036790 Cucumis sativus L.
DCAR_011035 Daucus carota
DCAR_025443 Daucus carota
Duzib150G0230 Durio zibethinus
Duzib150G1374 Durio zibethinus
Duzib168G0658 Durio zibethinus
Duzib168G1235 Durio zibethinus
Duzib187G0788 Durio zibethinus
Duzib187G1026 Durio zibethinus
ECA240G3076 Erigeron canadensis
EL10Ac2g04144 Beta vulgaris
EL10Ac3g05782 Beta vulgaris
EL10Ac8g18847 Beta vulgaris
Eucgr.B03153 Eucalyptus grandis
Eucgr.E02080 Eucalyptus grandis
Eucgr.H01569 Eucalyptus grandis
Eucgr.H04568 Eucalyptus grandis
Eucgr.H04712 Eucalyptus grandis
Eucgr.L01987 Eucalyptus grandis
FAN26G3292 Fragaria x ananassa
FAN27G0723 Fragaria x ananassa
FvH4_2g40780 Fragaria vesca
Glyma.04G063000 Glycine max
Glyma.06G064100 Glycine max
Glyma.06G064200 Glycine max
Glyma.09G094800 Glycine max
Glyma.15G202800 Glycine max
Gohir.A05G050200 Gossypium hirsutum
Gohir.A07G025100 Gossypium hirsutum
Gohir.A08G251100 Gossypium hirsutum
Gohir.A13G185400 Gossypium hirsutum
Gohir.D05G051800 Gossypium hirsutum
Gohir.D07G028600 Gossypium hirsutum
Gohir.D08G272600 Gossypium hirsutum
Gohir.D13G191900 Gossypium hirsutum
Gorai.001G029900 Gossypium raimondii
Gorai.004G291000 Gossypium raimondii
Gorai.009G053600 Gossypium raimondii
Gorai.013G217800 Gossypium raimondii
GSVIVG01001053001 Vitis vinifera
GSVIVG01001055001 Vitis vinifera
GSVIVG01035913001 Vitis vinifera
HanXRQChr05g0141501 Helianthus annuus
HanXRQChr09g0243311 Helianthus annuus
HanXRQChr10g0281671 Helianthus annuus
HanXRQChr10g0314531 Helianthus annuus
HanXRQChr12g0356931 Helianthus annuus
Haze_19290 Corylus avellana
Hma1.2p1_0082F.1_g042540 Hydrangea macrophylla
Hma1.2p1_0228F.1_g096640 Hydrangea macrophylla
Hund03471 Selenicereus undatus
Hund19603 Selenicereus undatus
Lalb_Chr08g0244301 Lupinus albus
Lalb_Chr11g0063581 Lupinus albus
Lalb_Chr11g0072771 Lupinus albus
Lalb_Chr23g0268351 Lupinus albus
Lj4g0019029 Lotus japonicus
Lj9A711T54 Lonicera japonica
Lsat_1_v5_gn_5_90781 Lactuca sativa
Lsat_1_v5_gn_7_48321 Lactuca sativa
Lsat_1_v5_gn_8_59320 Lactuca sativa
Manes.02G056500 Manihot esculenta
Manes.06G039600 Manihot esculenta
Manes.14G140700 Manihot esculenta
Mapoly0002s0182 Marchantia polymorpha
MBI01_g13076_MAGBIO Magnolia biondii
MBI08_g42278_MAGBIO Magnolia biondii
MBI09_g32439_MAGBIO Magnolia biondii
MBI15_g38770_MAGBIO Magnolia biondii
MBI19_g01936_MAGBIO Magnolia biondii
MBI19_g04964_MAGBIO Magnolia biondii
MBI19_g32184_MAGBIO Magnolia biondii
MCO11G092 Micromonas commoda
MD02G1011500 Malus domestica
MD08G1060200 Malus domestica
MD15G1036400 Malus domestica
MD15G1157300 Malus domestica
Medtr1g013070 Medicago truncatula
Medtr3g106310 Medicago truncatula
MELO3C011285.2 Cucumis melo
MELO3C015269.2 Cucumis melo
MELO3C016981.2 Cucumis melo
Migut.H00611 Erythranthe guttata
Migut.K00810 Erythranthe guttata
Nitab4.5_0000416g0160 Nicotiana tabacum
Nitab4.5_0001751g0010 Nicotiana tabacum
Nitab4.5_0004839g0030 Nicotiana tabacum
Nitab4.5_0005330g0030 Nicotiana tabacum
Nitab4.5_0005596g0100 Nicotiana tabacum
Nitab4.5_0009044g0020 Nicotiana tabacum
Nitab4.5_0010213g0030 Nicotiana tabacum
Nn2g12273 Nelumbo nucifera
Nn3g17484 Nelumbo nucifera
Nn4g23464 Nelumbo nucifera
Nn8g39759 Nelumbo nucifera
Oeu007069.1 Olea europaea
Oeu033402.1 Olea europaea
Os02g0796900 Oryza sativa ssp. japonica
Os02g0797200 Oryza sativa ssp. japonica
Os06g0181566 Oryza sativa ssp. japonica
Peaxi162Scf00177g00918 Petunia axillaris
Peaxi162Scf00347g00417 Petunia axillaris
PGR102G2880 Punica granatum
PGR142G2672 Punica granatum
PGSC0003DMG400001463 Solanum tuberosum
PGSC0003DMG400011840 Solanum tuberosum
Phvul.003G159100 Phaseolus vulgaris
Phvul.009G089400 Phaseolus vulgaris
Phvul.009G207900 Phaseolus vulgaris
Potri.006G188500 Populus trichocarpa
Potri.006G260500 Populus trichocarpa
Potri.006G260837 Populus trichocarpa
Potri.018G022100 Populus trichocarpa
Potri.018G112301 Populus trichocarpa
Pp3c15_14860 Physcomitrium patens
Pp3c6_610 Physcomitrium patens
Pp3c9_18780 Physcomitrium patens
PRCOL_00002648 Prasinoderma coloniale
Prupe.1G390600 Prunus persica
Prupe.7G258200 Prunus persica
Psat0s3660g0040 Pisum sativum
Psat6g028720 Pisum sativum
PSO017G5016 Papaver somniferum
PSO063G1897 Papaver somniferum
PSO386G0043 Papaver somniferum
PSO478G2399 Papaver somniferum
PSO724G1230 Papaver somniferum
PSO729G0230 Papaver somniferum
RcHm_v2.0_Chr2g0086361 Rosa chinensis
RcHm_v2.0_Chr6g0299801 Rosa chinensis
Sabra06G0144300 Salix brachista
Sabra06G0203400 Salix brachista
Sabra18G0024900 Salix brachista
SalBow1G0499 Salvia bowleyana
SalBow1G2523 Salvia bowleyana
SalBow1G6262 Salvia bowleyana
Sc10g0006270 Simmondsia chinensis
Sc18g0000040 Simmondsia chinensis
Sed0002385 Sechium edule
Sed0018228 Sechium edule
Sed0019423 Sechium edule
SEGI_23938 Sequoiadendron giganteum
SGA_v2.0_scaffold52G19121 Striga asiatica
SGA_v2.0_scaffold57G20194 Striga asiatica
SHI18486 Sapria himalayana
SMO169G0077 Selaginella moellendorffii
SMO169G0227 Selaginella moellendorffii
SMO298G0038 Selaginella moellendorffii
Solyc07g005050.3 Solanum lycopersicum
Solyc12g010350.3 Solanum lycopersicum
Sopen07g001180 Solanum pennellii
Sp7g29780 Schrenkiella parvula
TAR625G0528 Trochodendron aralioides
TAR626G0044 Trochodendron aralioides
THA.LOC104799042 Tarenaya hassleriana
THA.LOC104803639 Tarenaya hassleriana
THA.LOC104803852 Tarenaya hassleriana
THA.LOC104814119 Tarenaya hassleriana
THA.LOC104815003 Tarenaya hassleriana
THA.LOC104818600 Tarenaya hassleriana
Thecc.09G018500 Theobroma cacao
Thecc.09G036300 Theobroma cacao
Thhalv10000415m.g Eutrema salsugineum
Thhalv10021898m.g Eutrema salsugineum
Thhalv10026737m.g Eutrema salsugineum
TWI32G0946 Tripterygium wilfordii
TWI32G0990 Tripterygium wilfordii
TWI32G1265 Tripterygium wilfordii
TWI34G0154 Tripterygium wilfordii
TWI34G1690 Tripterygium wilfordii
TWI63G1381 Tripterygium wilfordii
unitig_32.g10727 Utricularia gibba
Zm00001eb192310 Zea mays

User provided reference genes

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