Gene: AT2G25210
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G25210
- Transcript Identifier AT2G25210.1
- Gene Type Coding gene
- Location Chr2 : 10740157-10740379 : positive
Gene Family Information
- ID HOM05D002583
- #Genes/#Species 264/83
- Phylogenetic origin
- ID ORTHO05D002776
- #Genes/#Species 263/83
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G25210.1
- uniprot Q0WWV8
Descriptions
- Description Ribosomal protein L39 family protein
- Computational description Ribosomal protein L39 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L39e, conserved site (InterPro:IPR020083), Ribosomal protein L39e (InterPro:IPR000077); BEST Arabidopsis thaliana protein match is: Ribosomal protein L39 family protein (TAIR:AT4G31985.1); Has 908 Blast hits to 908 proteins in 288 species: Archae - 195; Bacteria - 0; Metazoa - 389; Fungi - 107; Plants - 121; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | IEA | GOA Database | translation | |
| GO:0006412 | IEA | InterPro | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | IDA | Gene Ontology | mRNA binding | 1 |
| GO:0003735 | IEA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISM | Gene Ontology | cytoplasm | |
| GO:0022625 | HDA IBA | Gene Ontology | cytosolic large ribosomal subunit | 2 3 |
| GO:0005773 | HDA | Gene Ontology | vacuole | 4 |
| GO:0005840 | IEA | GOA Database | ribosome | |
| GO:0005840 | IEA | InterPro | ribosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.1.2.1.42 | Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL39 |