Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p31130 Brassica napus
A07p39730 Brassica napus
A10p26380 Brassica napus
Aa31LG3G15840 Aethionema arabicum
Aa31LG8G5340 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2837 Anthoceros agrestis
Actinidia14628 Actinidia chinensis
Actinidia39828 Actinidia chinensis
Ah.11g045090 Amaranthus hybridus
Ah.12g063750 Amaranthus hybridus
AL2G33700 Arabidopsis lyrata
AL3G31800 Arabidopsis lyrata
AL6G22000 Arabidopsis lyrata
Aqoxy3G00312 Aquilegia oxysepala
Aqoxy3G00350 Aquilegia oxysepala
Aqoxy7G02004 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.395KN8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3S4AIK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ALNH3D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FLDV8W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I4V6WJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QR0ETA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SM35B1 Arachis hypogaea
AT1G73875 Arabidopsis thaliana
AT3G18500 Arabidopsis thaliana
AT5G11350 Arabidopsis thaliana
ATR0686G047 Amborella trichopoda
ATR0716G098 Amborella trichopoda
Atru.chr7.2360 Acer truncatum
Atru.chr9.785 Acer truncatum
Atru.chr9.834 Acer truncatum
AUR62025858 Chenopodium quinoa
AUR62029859 Chenopodium quinoa
AUR62032350 Chenopodium quinoa
AUR62041845 Chenopodium quinoa
BcaB06g25894 Brassica carinata
BcaB08g37068 Brassica carinata
BcaC04g19237 Brassica carinata
BcaC05g28611 Brassica carinata
BolC5t33441H Brassica oleracea
BolC6t39837H Brassica oleracea
BraA05t21955Z Brassica rapa
BraA07t31522Z Brassica rapa
BraA10t44695Z Brassica rapa
C05p47150 Brassica napus
C06p33780 Brassica napus
C06p48020 Brassica napus
C09p65520 Brassica napus
CAN.G169.16 Capsicum annuum
CAN.G211.10 Capsicum annuum
CAN.G438.123 Capsicum annuum
CAN.G438.124 Capsicum annuum
CANSAT80G0130 Cannabis sativa
CARHR066980 Cardamine hirsuta
CARHR093860 Cardamine hirsuta
CARHR093870 Cardamine hirsuta
CARHR201900 Cardamine hirsuta
Carub.0002s2064 Capsella rubella
Carub.0003s1827 Capsella rubella
Carub.0003s1828 Capsella rubella
Carub.0006s0981 Capsella rubella
Ca_12924_v3 Cicer arietinum L.
Ca_17343_v3 Cicer arietinum L.
Ca_25496_v3 Cicer arietinum L.
CBR_g23053 Chara braunii
CBR_g52064 Chara braunii
Cc04_g07180 Coffea canephora
Cc04_g07420 Coffea canephora
Cc11_g01670 Coffea canephora
CDE05G0617 Ceratophyllum demersum
CDE06G2563 Ceratophyllum demersum
CDE07G1332 Ceratophyllum demersum
Cfa013193 Carpinus fangiana
Cfa019783 Carpinus fangiana
Ciclev10007580m.g Citrus clementina
Ciclev10020050m.g Citrus clementina
Ciclev10020074m.g Citrus clementina
CiPaw.07G219700 Carya illinoinensis
CiPaw.15G130000 Carya illinoinensis
CiPaw.16G084600 Carya illinoinensis
ClCG05G017110 Citrullus lanatus
ClCG06G014860 Citrullus lanatus
ClCG06G014950 Citrullus lanatus
COL.COLO4_05974 Corchorus olitorius
COL.COLO4_05975 Corchorus olitorius
COL.COLO4_16248 Corchorus olitorius
COL.COLO4_24000 Corchorus olitorius
Cpa.g.sc13.26 Carica papaya
Cpa.g.sc3.518 Carica papaya
Cpa.g.sc91.33 Carica papaya
Cre11.g467680 Chlamydomonas reinhardtii
Cre13.g564750 Chlamydomonas reinhardtii
CsaV3_1G003690 Cucumis sativus L.
CsaV3_1G003790 Cucumis sativus L.
CsaV3_3G046590 Cucumis sativus L.
CSS0016859 Camellia sinensis var. sinensis
CSS0019648 Camellia sinensis var. sinensis
CSS0024439 Camellia sinensis var. sinensis
CSS0035558 Camellia sinensis var. sinensis
DCAR_011546 Daucus carota
DCAR_022889 Daucus carota
DCAR_023204 Daucus carota
Dinv28095 Davidia involucrata
Dinv30190 Davidia involucrata
Dinv30191 Davidia involucrata
Dinv40425 Davidia involucrata
Duzib068G0056 Durio zibethinus
Duzib084G0547 Durio zibethinus
Duzib084G0767 Durio zibethinus
Duzib168G0774 Durio zibethinus
ECA233G0898 Erigeron canadensis
ECA248G2767 Erigeron canadensis
EL10Ac2g02570 Beta vulgaris
EL10Ac5g11435 Beta vulgaris
Eucgr.C02819 Eucalyptus grandis
Eucgr.E03549 Eucalyptus grandis
Eucgr.K02220 Eucalyptus grandis
Eucgr.K02664 Eucalyptus grandis
FAN04G0075 Fragaria x ananassa
FAN04G1424 Fragaria x ananassa
FAN08G0280 Fragaria x ananassa
FAN08G3011 Fragaria x ananassa
FAN13G0552 Fragaria x ananassa
FAN13G1131 Fragaria x ananassa
FAN15G0112 Fragaria x ananassa
FAN18G0909 Fragaria x ananassa
FAN18G0911 Fragaria x ananassa
FAN18G2205 Fragaria x ananassa
FAN24G1958 Fragaria x ananassa
FAN27G3474 Fragaria x ananassa
FvH4_2g29760 Fragaria vesca
FvH4_5g12230 Fragaria vesca
FvH4_5g12590 Fragaria vesca
Glyma.05G232800 Glycine max
Glyma.07G091166 Glycine max
Glyma.07G091232 Glycine max
Glyma.08G040202 Glycine max
Glyma.09G184700 Glycine max
Glyma.14G126800 Glycine max
Glyma.17G206966 Glycine max
Glyma.17G207032 Glycine max
Gohir.A08G090100 Gossypium hirsutum
Gohir.A11G006700 Gossypium hirsutum
Gohir.A12G266400 Gossypium hirsutum
Gohir.D08G102600 Gossypium hirsutum
Gohir.D11G005800 Gossypium hirsutum
Gohir.D12G266800 Gossypium hirsutum
Gorai.004G110700 Gossypium raimondii
Gorai.007G007000 Gossypium raimondii
Gorai.008G286800 Gossypium raimondii
GSVIVG01008252001 Vitis vinifera
GSVIVG01008276001 Vitis vinifera
GSVIVG01008277001 Vitis vinifera
GSVIVG01035771001 Vitis vinifera
HanXRQChr01g0030971 Helianthus annuus
HanXRQChr09g0250481 Helianthus annuus
Haze_18630 Corylus avellana
Haze_18666 Corylus avellana
Haze_18668 Corylus avellana
Haze_21590 Corylus avellana
Hma1.2p1_0000F.1_g000930 Hydrangea macrophylla
Hma1.2p1_0592F.1_g185310 Hydrangea macrophylla
HPP92_004824 Vanilla planifolia
HPP92_023176 Vanilla planifolia
HPP92_023328 Vanilla planifolia
HPP92_024804 Vanilla planifolia
HPP92_024805 Vanilla planifolia
HPP92_024815 Vanilla planifolia
HPP92_024816 Vanilla planifolia
Hund03011 Selenicereus undatus
Lalb_Chr14g0361941 Lupinus albus
Lalb_Chr16g0387951 Lupinus albus
Lalb_Chr24g0397751 Lupinus albus
Lj2g0022064 Lotus japonicus
Lj4g0002171 Lotus japonicus
Lj5A148T44 Lonicera japonica
Lj5g0001208 Lotus japonicus
Lj7C716T9 Lonicera japonica
Lj9A429G46 Lonicera japonica
Lsat_1_v5_gn_1_42021 Lactuca sativa
Lsat_1_v5_gn_4_99121 Lactuca sativa
Manes.01G012100 Manihot esculenta
Manes.01G020000 Manihot esculenta
Manes.16G118500 Manihot esculenta
Mapoly0143s0035 Marchantia polymorpha
MBI04_g00949_MAGBIO Magnolia biondii
MCO03G164 Micromonas commoda
MD06G1212300 Malus domestica
MD06G1215600 Malus domestica
MD15G1118800 Malus domestica
Medtr1g011720 Medicago truncatula
Medtr6g084560 Medicago truncatula
Medtr8g103870 Medicago truncatula
MELO3C003679.2 Cucumis melo
MELO3C017294.2 Cucumis melo
MELO3C017303.2 Cucumis melo
Migut.A00301 Erythranthe guttata
Migut.I00344 Erythranthe guttata
MSTRG.11325 Avicennia marina
MSTRG.11326 Avicennia marina
MSTRG.11755 Avicennia marina
Nitab4.5_0000410g0020 Nicotiana tabacum
Nitab4.5_0000508g0200 Nicotiana tabacum
Nitab4.5_0000974g0010 Nicotiana tabacum
Nitab4.5_0001473g0010 Nicotiana tabacum
Nitab4.5_0001599g0100 Nicotiana tabacum
Nitab4.5_0005886g0030 Nicotiana tabacum
Nn2g11910 Nelumbo nucifera
Nn3g17825 Nelumbo nucifera
Nn4g23757 Nelumbo nucifera
Oeu031903.1 Olea europaea
Oeu031904.1 Olea europaea
Os01g0610600 Oryza sativa ssp. japonica
Os06g0264900 Oryza sativa ssp. japonica
Peaxi162Scf00015g00840 Petunia axillaris
Peaxi162Scf00015g00943 Petunia axillaris
Peaxi162Scf00251g01218 Petunia axillaris
PGR044G0012 Punica granatum
PGR044G1258 Punica granatum
PGR044G2604 Punica granatum
PGSC0003DMG400005718 Solanum tuberosum
Phvul.001G053400 Phaseolus vulgaris
Phvul.001G075700 Phaseolus vulgaris
Phvul.002G315100 Phaseolus vulgaris
Phvul.004G157500 Phaseolus vulgaris
Phvul.006G136900 Phaseolus vulgaris
Potri.012G057100 Populus trichocarpa
Potri.018G032300 Populus trichocarpa
Pp3c10_2300 Physcomitrium patens
Pp3c1_25240 Physcomitrium patens
PRCOL_00006823 Prasinoderma coloniale
Prupe.1G472000 Prunus persica
Prupe.5G218400 Prunus persica
Prupe.5G220800 Prunus persica
Psat1g037760 Pisum sativum
Psat6g029920 Pisum sativum
Psat7g012880 Pisum sativum
PSO017G0052 Papaver somniferum
PSO017G1524 Papaver somniferum
PSO017G2716 Papaver somniferum
PSO170G4902 Papaver somniferum
PSO478G0892 Papaver somniferum
QL10p023568 Quercus lobata
QL10p025208 Quercus lobata
QL12p031752 Quercus lobata
RcHm_v2.0_Chr2g0106391 Rosa chinensis
RcHm_v2.0_Chr6g0298781 Rosa chinensis
RcHm_v2.0_Chr7g0184741 Rosa chinensis
RcHm_v2.0_Chr7g0185351 Rosa chinensis
Rhsim06G0139700 Rhododendron simsii
Rhsim07G0150500 Rhododendron simsii
Rhsim08G0135000 Rhododendron simsii
Rhsim08G0135100 Rhododendron simsii
Rhsim08G0136000 Rhododendron simsii
Sabra12G0042500 Salix brachista
Sabra18G0033200 Salix brachista
SalBow4G3109 Salvia bowleyana
SalBow5G3324 Salvia bowleyana
Sc09g0008670 Simmondsia chinensis
Sc10g0007330 Simmondsia chinensis
Sed0004772 Sechium edule
Sed0020661 Sechium edule
Sed0022944 Sechium edule
SEGI_24005 Sequoiadendron giganteum
SGA_v2.0_scaffold22G09944 Striga asiatica
SGA_v2.0_scaffold25G10989 Striga asiatica
SHI26923 Sapria himalayana
SMO119G0013 Selaginella moellendorffii
Solyc03g119570.3 Solanum lycopersicum
Solyc03g119710.4 Solanum lycopersicum
Solyc08g067420.4 Solanum lycopersicum
Sopen03g038400 Solanum pennellii
Sopen03g038540 Solanum pennellii
Sopen08g021350 Solanum pennellii
Sp3g16590 Schrenkiella parvula
Sp5g29070 Schrenkiella parvula
Sp6g32230 Schrenkiella parvula
TAR371G0964 Trochodendron aralioides
TAR625G0233 Trochodendron aralioides
TAR629G0604 Trochodendron aralioides
TAR633G1824 Trochodendron aralioides
THA.LOC104798740 Tarenaya hassleriana
THA.LOC104815032 Tarenaya hassleriana
THA.LOC104820403 Tarenaya hassleriana
Thecc.03G030100 Theobroma cacao
Thecc.03G034400 Theobroma cacao
Thecc.09G147800 Theobroma cacao
Thhalv10012752m.g Eutrema salsugineum
Thhalv10018567m.g Eutrema salsugineum
Thhalv10020715m.g Eutrema salsugineum
TPR.G15668 Trifolium pratense
TPR.G16680 Trifolium pratense
TPR.G18918 Trifolium pratense
TPR.G21692 Trifolium pratense
TPR.G27935 Trifolium pratense
TPR.G40765 Trifolium pratense
TPR.G8750 Trifolium pratense
TWI81G0888 Tripterygium wilfordii
unitig_747.g21884 Utricularia gibba
vmacro05201 Vaccinium macrocarpon
vmacro05205 Vaccinium macrocarpon
vmacro17662 Vaccinium macrocarpon
VMungo0251G2601 Vigna mungo
VMungo0464G0574 Vigna mungo
VMungo0647G2188 Vigna mungo

User provided reference genes

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