Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p13490 Brassica napus
A03p33150 Brassica napus
A04p15250 Brassica napus
A05p44270 Brassica napus
Aa31LG2G2870 Aethionema arabicum
Aa31LG5G13310 Aethionema arabicum
Aa31LG9G17560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4089 Anthoceros agrestis
Actinidia06478 Actinidia chinensis
Actinidia12416 Actinidia chinensis
Actinidia17190 Actinidia chinensis
Actinidia34052 Actinidia chinensis
Ah.09g236970 Amaranthus hybridus
Ah.14g088590 Amaranthus hybridus
AL2G23800 Arabidopsis lyrata
AL3G12260 Arabidopsis lyrata
AL7G46250 Arabidopsis lyrata
Aqoxy3G04026 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4AP7UE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5I3HHA Arachis hypogaea
AT1G66160 Arabidopsis thaliana
AT3G02840 Arabidopsis thaliana
AT5G37490 Arabidopsis thaliana
ATR0021G034 Amborella trichopoda
Atru.chr11.794 Acer truncatum
Atru.chr9.1603 Acer truncatum
AUR62012553 Chenopodium quinoa
AUR62014646 Chenopodium quinoa
BcaB04g19383 Brassica carinata
BcaB05g24155 Brassica carinata
BcaB06g27696 Brassica carinata
BcaC01g04426 Brassica carinata
BcaC02g08886 Brassica carinata
BcaC03g14732 Brassica carinata
BcaC03g16242 Brassica carinata
BolC2t08312H Brassica oleracea
BolC3t16298H Brassica oleracea
BolC4t26534H Brassica oleracea
BolC5t35060H Brassica oleracea
BraA02t06407Z Brassica rapa
BraA03t12486Z Brassica rapa
BraA04t17165Z Brassica rapa
BraA06t23283Z Brassica rapa
C02p21790 Brassica napus
C03p40340 Brassica napus
C04p49470 Brassica napus
C09p75970 Brassica napus
CAN.G282.111 Capsicum annuum
CAN.G582.11 Capsicum annuum
CAN.G74.26 Capsicum annuum
CAN.G74.27 Capsicum annuum
CAN.G74.28 Capsicum annuum
CANSAT78G1703 Cannabis sativa
CANSAT80G2094 Cannabis sativa
CARHR076850 Cardamine hirsuta
CARHR215440 Cardamine hirsuta
CARHR292310 Cardamine hirsuta
Carub.0002s1215 Capsella rubella
Carub.0003s0194 Capsella rubella
Carub.0007s3266 Capsella rubella
Ca_05856_v3 Cicer arietinum L.
Ca_17083_v3 Cicer arietinum L.
Ca_25977_v3 Cicer arietinum L.
CBR_g31690 Chara braunii
Cc07_g13140 Coffea canephora
Cc11_g06300 Coffea canephora
CDE05G1942 Ceratophyllum demersum
CDE11G1248 Ceratophyllum demersum
Cfa000825 Carpinus fangiana
Cfa007779 Carpinus fangiana
Cfa015053 Carpinus fangiana
Cfa020638 Carpinus fangiana
Ciclev10015223m.g Citrus clementina
Ciclev10015253m.g Citrus clementina
Ciclev10015599m.g Citrus clementina
CiPaw.03G074900 Carya illinoinensis
CiPaw.04G048200 Carya illinoinensis
CiPaw.05G188000 Carya illinoinensis
CiPaw.06G056000 Carya illinoinensis
CiPaw.15G147800 Carya illinoinensis
CiPaw.16G097700 Carya illinoinensis
ClCG05G011340 Citrullus lanatus
ClCG07G005470 Citrullus lanatus
COL.COLO4_06947 Corchorus olitorius
COL.COLO4_20595 Corchorus olitorius
COL.COLO4_27604 Corchorus olitorius
Cpa.g.c45436 Carica papaya
Cpa.g.sc116.85 Carica papaya
Cpa.g.sc3.352 Carica papaya
Cpa.g.sc3.353 Carica papaya
Cre01.g016800 Chlamydomonas reinhardtii
CsaV3_3G021120 Cucumis sativus L.
CsaV3_5G014460 Cucumis sativus L.
CSS0035929 Camellia sinensis var. sinensis
CSS0046940 Camellia sinensis var. sinensis
DCAR_002669 Daucus carota
DCAR_014153 Daucus carota
DCAR_023550 Daucus carota
DCAR_026812 Daucus carota
Dinv11760 Davidia involucrata
Dinv14384 Davidia involucrata
Dinv28176 Davidia involucrata
Duzib084G0826 Durio zibethinus
Duzib138G1721 Durio zibethinus
Duzib248G1328 Durio zibethinus
Duzib251G0510 Durio zibethinus
Duzib268G1749 Durio zibethinus
ECA233G4476 Erigeron canadensis
EL10As6g23647 Beta vulgaris
Eucgr.F02888 Eucalyptus grandis
Eucgr.H00556 Eucalyptus grandis
FAN04G0611 Fragaria x ananassa
FAN07G0215 Fragaria x ananassa
FAN08G1753 Fragaria x ananassa
FAN12G2592 Fragaria x ananassa
FAN13G0817 Fragaria x ananassa
FAN17G1283 Fragaria x ananassa
FAN18G3716 Fragaria x ananassa
FAN19G2802 Fragaria x ananassa
FAN22G2302 Fragaria x ananassa
FAN23G2964 Fragaria x ananassa
FAN26G2449 Fragaria x ananassa
FvH4_1g29930 Fragaria vesca
FvH4_4g33190 Fragaria vesca
FvH4_5g17730 Fragaria vesca
Glyma.02G242900 Glycine max
Glyma.07G106000 Glycine max
Glyma.09G172100 Glycine max
Glyma.11G214500 Glycine max
Glyma.14G212200 Glycine max
Glyma.18G042100 Glycine max
Gohir.A03G112300 Gossypium hirsutum
Gohir.A11G169000 Gossypium hirsutum
Gohir.A12G271000 Gossypium hirsutum
Gohir.A13G028000 Gossypium hirsutum
Gohir.D02G136900 Gossypium hirsutum
Gohir.D11G175200 Gossypium hirsutum
Gohir.D12G271500 Gossypium hirsutum
Gohir.D13G026800 Gossypium hirsutum
Gorai.005G152900 Gossypium raimondii
Gorai.007G187800 Gossypium raimondii
Gorai.008G291900 Gossypium raimondii
Gorai.013G030100 Gossypium raimondii
GSVIVG01011616001 Vitis vinifera
HanXRQChr07g0191711 Helianthus annuus
HanXRQChr08g0224581 Helianthus annuus
HanXRQChr12g0365491 Helianthus annuus
HanXRQChr14g0444851 Helianthus annuus
Haze_05806 Corylus avellana
Haze_10837 Corylus avellana
Haze_14292 Corylus avellana
Haze_18920 Corylus avellana
Hma1.2p1_0034F.1_g021210 Hydrangea macrophylla
Hma1.2p1_0658F.1_g197240 Hydrangea macrophylla
HPP92_006131 Vanilla planifolia
HPP92_010984 Vanilla planifolia
HPP92_016747 Vanilla planifolia
HPP92_020293 Vanilla planifolia
HPP92_021316 Vanilla planifolia
HPP92_024770 Vanilla planifolia
HPP92_028486 Vanilla planifolia
Lalb_Chr09g0330261 Lupinus albus
Lalb_Chr10g0104201 Lupinus albus
Lalb_Chr14g0370551 Lupinus albus
Lalb_Chr17g0345971 Lupinus albus
Lalb_Chr22g0353581 Lupinus albus
Lalb_Chr24g0398221 Lupinus albus
Lj2g0013687 Lotus japonicus
Lj2P516T13 Lonicera japonica
Lj3P862T14 Lonicera japonica
Lj6g0004738 Lotus japonicus
Lj6P733T51 Lonicera japonica
LjContig00141g0003027 Lotus japonicus
Lsat_1_v5_gn_2_65621 Lactuca sativa
Lsat_1_v5_gn_8_36361 Lactuca sativa
Manes.01G121300 Manihot esculenta
Manes.02G079100 Manihot esculenta
Manes.06G002400 Manihot esculenta
Manes.14G172900 Manihot esculenta
Manes.15G137100 Manihot esculenta
Manes.17G086300 Manihot esculenta
Mapoly0024s0051 Marchantia polymorpha
Mapoly0024s0052 Marchantia polymorpha
MBI13_g04208_MAGBIO Magnolia biondii
MBI19_g23694_MAGBIO Magnolia biondii
MD06G1232800 Malus domestica
MD09G1266300 Malus domestica
MD09G1266400 Malus domestica
MD13G1017300 Malus domestica
MD14G1239800 Malus domestica
MD16G1015400 Malus domestica
MD17G1262600 Malus domestica
Medtr3g065080 Medicago truncatula
Medtr5g048050 Medicago truncatula
Medtr5g077510 Medicago truncatula
Medtr6g071340 Medicago truncatula
MELO3C020245.2 Cucumis melo
MELO3C027122.2 Cucumis melo
Migut.H02234 Erythranthe guttata
MSTRG.2629 Avicennia marina
MSTRG.3612 Avicennia marina
MSTRG.680 Avicennia marina
Nitab4.5_0000538g0120 Nicotiana tabacum
Nitab4.5_0000856g0110 Nicotiana tabacum
Nitab4.5_0002521g0030 Nicotiana tabacum
Nitab4.5_0002951g0020 Nicotiana tabacum
Nitab4.5_0003884g0010 Nicotiana tabacum
Nitab4.5_0008132g0040 Nicotiana tabacum
Nn1g08491 Nelumbo nucifera
Nn3g18438 Nelumbo nucifera
Nn4g24480 Nelumbo nucifera
Oeu006348.1 Olea europaea
Oeu037159.1 Olea europaea
Oeu048942.1 Olea europaea
Os02g0738200 Oryza sativa ssp. japonica
Os03g0240600 Oryza sativa ssp. japonica
Os06g0248500 Oryza sativa ssp. japonica
Peaxi162Scf00183g00021 Petunia axillaris
Peaxi162Scf00337g00062 Petunia axillaris
PGR083G2762 Punica granatum
PGR102G1627 Punica granatum
PGSC0003DMG400022775 Solanum tuberosum
PGSC0003DMG400028687 Solanum tuberosum
PGSC0003DMG400029464 Solanum tuberosum
Phvul.001G228500 Phaseolus vulgaris
Phvul.002G331800 Phaseolus vulgaris
Phvul.004G147500 Phaseolus vulgaris
Phvul.008G238500 Phaseolus vulgaris
Potri.004G083900 Populus trichocarpa
Potri.008G137700 Populus trichocarpa
Potri.010G103100 Populus trichocarpa
Potri.012G042600 Populus trichocarpa
Potri.015G031000 Populus trichocarpa
Potri.017G135000 Populus trichocarpa
Prupe.1G336200 Prunus persica
Prupe.3G164200 Prunus persica
Prupe.5G237400 Prunus persica
Psat1g029320 Pisum sativum
Psat2g044920 Pisum sativum
Psat5g119440 Pisum sativum
PSO541G5444 Papaver somniferum
PSO675G2250 Papaver somniferum
QL02p059659 Quercus lobata
QL02p059677 Quercus lobata
QL03p038479 Quercus lobata
QL10p031724 Quercus lobata
RcHm_v2.0_Chr3g0492391 Rosa chinensis
RcHm_v2.0_Chr4g0442301 Rosa chinensis
RcHm_v2.0_Chr7g0177891 Rosa chinensis
Rhsim09G0087100 Rhododendron simsii
Rhsim10G0181300 Rhododendron simsii
Sabra04G0055600 Salix brachista
Sabra08G0104800 Salix brachista
Sabra10G0075700 Salix brachista
Sabra12G0029800 Salix brachista
Sabra15G0025900 Salix brachista
Sabra17G0110900 Salix brachista
Sabra17G0113900 Salix brachista
SabraUnG0006700 Salix brachista
SalBow3G2392 Salvia bowleyana
SalBow5G1050 Salvia bowleyana
SalBow5G1071 Salvia bowleyana
SalBow5G4001 Salvia bowleyana
Sc17g0006840 Simmondsia chinensis
Sc24g0000610 Simmondsia chinensis
Sed0001282 Sechium edule
Sed0007757 Sechium edule
Sed0015042 Sechium edule
Sed0027186 Sechium edule
SEGI_00137 Sequoiadendron giganteum
SEGI_21367 Sequoiadendron giganteum
SGA_v2.0_scaffold2G00953 Striga asiatica
SGA_v2.0_scaffold45G17139 Striga asiatica
SMO143G0315 Selaginella moellendorffii
SMO174G0099 Selaginella moellendorffii
SMO296G0007 Selaginella moellendorffii
Solyc01g005160.4 Solanum lycopersicum
Solyc04g008100.3 Solanum lycopersicum
Solyc11g006030.1 Solanum lycopersicum
Sopen01g001190 Solanum pennellii
Sopen04g003240 Solanum pennellii
Sopen11g001970 Solanum pennellii
Sp3g01870 Schrenkiella parvula
SpUn0331_0010 Schrenkiella parvula
TAR622G0667 Trochodendron aralioides
TAR629G1260 Trochodendron aralioides
THA.LOC104805636 Tarenaya hassleriana
THA.LOC104822042 Tarenaya hassleriana
THA.LOC104823819 Tarenaya hassleriana
THA.LOC104827183 Tarenaya hassleriana
Thecc.02G306400 Theobroma cacao
Thecc.03G062900 Theobroma cacao
Thhalv10018597m.g Eutrema salsugineum
Thhalv10020937m.g Eutrema salsugineum
TPR.G26662 Trifolium pratense
TPR.G8673 Trifolium pratense
TPR.G9991 Trifolium pratense
TWI15G0494 Tripterygium wilfordii
TWI53G1009 Tripterygium wilfordii
TWI60G0926 Tripterygium wilfordii
TWI74G0157 Tripterygium wilfordii
TWI81G0017 Tripterygium wilfordii
unitig_92.g28197 Utricularia gibba
vmacro20638 Vaccinium macrocarpon
vmacro23215 Vaccinium macrocarpon
VMungo0464G1385 Vigna mungo
VMungo0647G1257 Vigna mungo
VMungo1383G3673 Vigna mungo
Zm00001eb010210 Zea mays
Zm00001eb026100 Zea mays
Zm00001eb253960 Zea mays
Zm00001eb371590 Zea mays

User provided reference genes

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