Gene: Sopen11g001970
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g001970
- Transcript Identifier Sopen11g001970.1
- Gene Type Coding gene
- Location Spenn-ch11 : 897622-898914 : negative
Gene Family Information
- ID HOM05D000271
- #Genes/#Species 1604/95
- Phylogenetic origin
- ID ORTHO05D002152
- #Genes/#Species 312/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen11g001970.1
Descriptions
- Description ARM repeat superfamily protein | FUNCTIONS IN: ubiquitin-protein ligase activity, binding | INVOLVED IN: response to chitin | LOCATED IN: ubiquitin ligase complex | EXPRESSED IN: 14 plant structures | EXPRESSED DURING: 7 growth stages | CONTAINS InterPro DOMAIN/s: U box domain , Armadillo-like helical , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: CYS, MET, PRO, and GLY protein 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016567 | IEA | InterPro | protein ubiquitination | |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT5G37490 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004842 | IEA | InterPro | ubiquitin-protein transferase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G66160 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.2.1.4.2.2 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-III ligase |