Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p36490 Brassica napus
A06p40020 Brassica napus
A07p35640 Brassica napus
A07p40180 Brassica napus
Aa31LG2G4000 Aethionema arabicum
Aa31LG4G11540 Aethionema arabicum
Aa31LG4G4620 Aethionema arabicum
Aa31LG9G16600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2755 Anthoceros agrestis
Actinidia01974 Actinidia chinensis
Actinidia04851 Actinidia chinensis
Actinidia09240 Actinidia chinensis
Actinidia12321 Actinidia chinensis
Actinidia32288 Actinidia chinensis
Actinidia33245 Actinidia chinensis
Ah.02g113860 Amaranthus hybridus
Ah.11g048090 Amaranthus hybridus
AL2G28440 Arabidopsis lyrata
AL2G34220 Arabidopsis lyrata
AL5G19260 Arabidopsis lyrata
Aqoxy3G03561 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2KIY95 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3E81D1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5U46LK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IE8Q2W Arachis hypogaea
AT1G69330 Arabidopsis thaliana
AT1G74370 Arabidopsis thaliana
AT3G29270 Arabidopsis thaliana
ATR0111G018 Amborella trichopoda
Atru.chr8.387 Acer truncatum
Atru.chr9.292 Acer truncatum
AUR62007949 Chenopodium quinoa
AUR62008484 Chenopodium quinoa
AUR62021602 Chenopodium quinoa
BcaB02g06936 Brassica carinata
BcaB02g06938 Brassica carinata
BcaB02g06939 Brassica carinata
BcaB03g15246 Brassica carinata
BcaB07g30089 Brassica carinata
BcaC03g14223 Brassica carinata
BcaC05g29968 Brassica carinata
BcaC06g33683 Brassica carinata
BcaC07g40433 Brassica carinata
BcaC08g46867 Brassica carinata
BcaC08g47006 Brassica carinata
BcaNung01642 Brassica carinata
BolC2t11601H Brassica oleracea
BolC6t38456H Brassica oleracea
BolC6t39373H Brassica oleracea
BolC6t39882H Brassica oleracea
BolC7t44337H Brassica oleracea
BraA02t08644Z Brassica rapa
BraA06t26917Z Brassica rapa
BraA07t30583Z Brassica rapa
BraA07t31152Z Brassica rapa
BraA07t31563Z Brassica rapa
C02p15250 Brassica napus
C02p55450 Brassica napus
C04p57990 Brassica napus
C06p33400 Brassica napus
C06p40590 Brassica napus
C06p48530 Brassica napus
C07p38150 Brassica napus
CAN.G1340.6 Capsicum annuum
CAN.G206.198 Capsicum annuum
CAN.G442.10 Capsicum annuum
CANSAT64G0357 Cannabis sativa
CANSAT64G2065 Cannabis sativa
CARHR062220 Cardamine hirsuta
CARHR067630 Cardamine hirsuta
CARHR153960 Cardamine hirsuta
Carub.0002s1593 Capsella rubella
Carub.0002s2114 Capsella rubella
Carub.0005s0797 Capsella rubella
Ca_04867_v3 Cicer arietinum L.
Ca_04943_v3 Cicer arietinum L.
Cc07_g03880 Coffea canephora
Cc11_g12320 Coffea canephora
CDE06G0103 Ceratophyllum demersum
Cfa007623 Carpinus fangiana
Cfa008901 Carpinus fangiana
Ciclev10012457m.g Citrus clementina
Ciclev10020924m.g Citrus clementina
CiPaw.03G091500 Carya illinoinensis
CiPaw.04G058600 Carya illinoinensis
CiPaw.05G127500 Carya illinoinensis
ClCG01G010710 Citrullus lanatus
ClCG08G004370 Citrullus lanatus
ClCG08G004690 Citrullus lanatus
ClCG09G022190 Citrullus lanatus
ClCG10G001260 Citrullus lanatus
COL.COLO4_21374 Corchorus olitorius
COL.COLO4_27924 Corchorus olitorius
COL.COLO4_36874 Corchorus olitorius
Cpa.g.c36103 Carica papaya
Cpa.g.sc1.98 Carica papaya
Cpa.g.sc14.143 Carica papaya
CsaV3_5G025490 Cucumis sativus L.
CsaV3_6G003900 Cucumis sativus L.
CSS0000757 Camellia sinensis var. sinensis
CSS0021370 Camellia sinensis var. sinensis
CSS0034243 Camellia sinensis var. sinensis
CSS0038375 Camellia sinensis var. sinensis
CSS0040983 Camellia sinensis var. sinensis
CSS0050508 Camellia sinensis var. sinensis
DCAR_016587 Daucus carota
DCAR_023810 Daucus carota
DCAR_025406 Daucus carota
Dinv10679 Davidia involucrata
Dinv11488 Davidia involucrata
Dinv16708 Davidia involucrata
Dinv21834 Davidia involucrata
Dinv33809 Davidia involucrata
Dinv34118 Davidia involucrata
Dinv38765 Davidia involucrata
Duzib147G1625 Durio zibethinus
Duzib187G0703 Durio zibethinus
Duzib205G1291 Durio zibethinus
Duzib251G0087 Durio zibethinus
Duzib264G0753 Durio zibethinus
Duzib268G1475 Durio zibethinus
ECA232G1491 Erigeron canadensis
ECA238G2192 Erigeron canadensis
ECA247G1424 Erigeron canadensis
EL10Ac5g11087 Beta vulgaris
Eucgr.B03176 Eucalyptus grandis
Eucgr.I01986 Eucalyptus grandis
FAN07G0344 Fragaria x ananassa
FAN12G3704 Fragaria x ananassa
FAN17G2654 Fragaria x ananassa
FAN22G0495 Fragaria x ananassa
FvH4_4g30433 Fragaria vesca
FvH4_6g47511 Fragaria vesca
Glyma.01G055900 Glycine max
Glyma.02G114200 Glycine max
Glyma.08G241700 Glycine max
Glyma.13G059100 Glycine max
Glyma.18G264000 Glycine max
Glyma.19G027300 Glycine max
Gohir.A03G103100 Gossypium hirsutum
Gohir.A05G370300 Gossypium hirsutum
Gohir.A09G011700 Gossypium hirsutum
Gohir.A11G071500 Gossypium hirsutum
Gohir.A13G080200 Gossypium hirsutum
Gohir.A13G087600 Gossypium hirsutum
Gohir.D02G128300 Gossypium hirsutum
Gohir.D04G045200 Gossypium hirsutum
Gohir.D09G010700 Gossypium hirsutum
Gohir.D11G075500 Gossypium hirsutum
Gohir.D13G080000 Gossypium hirsutum
Gohir.D13G093100 Gossypium hirsutum
Gorai.005G144000 Gossypium raimondii
Gorai.006G012300 Gossypium raimondii
Gorai.007G081200 Gossypium raimondii
Gorai.010G140400 Gossypium raimondii
Gorai.012G050400 Gossypium raimondii
Gorai.013G091600 Gossypium raimondii
GSVIVG01007932001 Vitis vinifera
GSVIVG01011489001 Vitis vinifera
HanXRQChr05g0157161 Helianthus annuus
HanXRQChr07g0199491 Helianthus annuus
HanXRQChr09g0270911 Helianthus annuus
HanXRQChr10g0308061 Helianthus annuus
HanXRQChr14g0426871 Helianthus annuus
Haze_11977 Corylus avellana
Hma1.2p1_0221F.1_g093110 Hydrangea macrophylla
Hma1.2p1_0357F.1_g134460 Hydrangea macrophylla
Hma1.2p1_1813F.1_g303800 Hydrangea macrophylla
Hma1.2p1_1813F.1_g303810 Hydrangea macrophylla
Hma1.2p1_3044F.1_g332084 Hydrangea macrophylla
Hma1.2p1_3044F.1_g332086 Hydrangea macrophylla
HPP92_013439 Vanilla planifolia
HPP92_020420 Vanilla planifolia
Hund25196 Selenicereus undatus
Lalb_Chr02g0159061 Lupinus albus
Lalb_Chr04g0255791 Lupinus albus
Lalb_Chr06g0175121 Lupinus albus
Lalb_Chr10g0093211 Lupinus albus
Lalb_Chr10g0098611 Lupinus albus
Lalb_Chr17g0341051 Lupinus albus
Lj1g0007528 Lotus japonicus
Lj1g0027565 Lotus japonicus
Lj2g0009004 Lotus japonicus
Lj2g0024015 Lotus japonicus
Lj5C106T14 Lonicera japonica
Lj6P782T98 Lonicera japonica
Lju41C7T11 Lonicera japonica
Lju41C7T2 Lonicera japonica
Lsat_1_v5_gn_1_13801 Lactuca sativa
Lsat_1_v5_gn_2_87941 Lactuca sativa
Lsat_1_v5_gn_5_21700 Lactuca sativa
Manes.01G099200 Manihot esculenta
Manes.02G051200 Manihot esculenta
Manes.14G083000 Manihot esculenta
Mapoly0014s0078 Marchantia polymorpha
MBI16_g15531_MAGBIO Magnolia biondii
MD09G1061100 Malus domestica
MD13G1065500 Malus domestica
MD16G1064000 Malus domestica
MD17G1056500 Malus domestica
Medtr5g043680 Medicago truncatula
Medtr6g013720 Medicago truncatula
MELO3C002929.2 Cucumis melo
MELO3C011654.2 Cucumis melo
Migut.H00654 Erythranthe guttata
Migut.K01294 Erythranthe guttata
Migut.L01215 Erythranthe guttata
MSTRG.13442 Avicennia marina
MSTRG.15460 Avicennia marina
MSTRG.23903 Avicennia marina
MSTRG.3022 Avicennia marina
MSTRG.736 Avicennia marina
Nitab4.5_0000334g0280 Nicotiana tabacum
Nitab4.5_0000565g0090 Nicotiana tabacum
Nitab4.5_0000720g0020 Nicotiana tabacum
Nitab4.5_0002832g0010 Nicotiana tabacum
Nitab4.5_0004304g0020 Nicotiana tabacum
Nitab4.5_0004545g0020 Nicotiana tabacum
Oeu010236.1 Olea europaea
Oeu016227.1 Olea europaea
Oeu062144.1 Olea europaea
Os03g0211100 Oryza sativa ssp. japonica
Os03g0427100 Oryza sativa ssp. japonica
Peaxi162Scf00097g00062 Petunia axillaris
Peaxi162Scf00166g00072 Petunia axillaris
Peaxi162Scf00314g00013 Petunia axillaris
PGR004G2248 Punica granatum
PGSC0003DMG400001351 Solanum tuberosum
PGSC0003DMG400004196 Solanum tuberosum
PGSC0003DMG400028383 Solanum tuberosum
Phvul.002G068700 Phaseolus vulgaris
Phvul.004G033200 Phaseolus vulgaris
Phvul.008G036100 Phaseolus vulgaris
Potri.004G125400 Populus trichocarpa
Potri.010G161100 Populus trichocarpa
Potri.012G067200 Populus trichocarpa
Potri.017G090000 Populus trichocarpa
Pp3c15_14420 Physcomitrium patens
Pp3c9_15340 Physcomitrium patens
Prupe.1G282600 Prunus persica
Prupe.3G259000 Prunus persica
Psat2g127920 Pisum sativum
PSO013G0406 Papaver somniferum
PSO017G0919 Papaver somniferum
PSO063G6506 Papaver somniferum
PSO421G0347 Papaver somniferum
PSO478G3275 Papaver somniferum
PSO782G5329 Papaver somniferum
QL02p039471 Quercus lobata
QL02p039726 Quercus lobata
QL03p071026 Quercus lobata
RcHm_v2.0_Chr2g0166551 Rosa chinensis
RcHm_v2.0_Chr4g0438761 Rosa chinensis
Rhsim08G0073500 Rhododendron simsii
Rhsim10G0046700 Rhododendron simsii
Rhsim12G0134300 Rhododendron simsii
Sabra10G0122500 Salix brachista
Sabra17G0079100 Salix brachista
SalBow1G4512 Salvia bowleyana
SalBow2G1503 Salvia bowleyana
SalBow2G2367 Salvia bowleyana
Sc04g0002980 Simmondsia chinensis
Sc10g0003300 Simmondsia chinensis
Sc11g0002300 Simmondsia chinensis
Sed0009530 Sechium edule
Sed0020110 Sechium edule
SEGI_08991 Sequoiadendron giganteum
SEGI_30951 Sequoiadendron giganteum
SGA_v2.0_scaffold148G36486 Striga asiatica
SGA_v2.0_scaffold16G07763 Striga asiatica
SHI26985 Sapria himalayana
SMO263G0005 Selaginella moellendorffii
Solyc01g011030.3 Solanum lycopersicum
Solyc02g088570.2 Solanum lycopersicum
Solyc05g012560.3 Solanum lycopersicum
Sopen01g034030 Solanum pennellii
Sopen02g033290 Solanum pennellii
Sopen05g007390 Solanum pennellii
Sp2g17850 Schrenkiella parvula
Sp5g24390 Schrenkiella parvula
Sp5g29530 Schrenkiella parvula
TAR371G0603 Trochodendron aralioides
TAR374G1614 Trochodendron aralioides
TAR383G0440 Trochodendron aralioides
TAR627G0036 Trochodendron aralioides
TAR629G1129 Trochodendron aralioides
THA.LOC104801358 Tarenaya hassleriana
THA.LOC104805495 Tarenaya hassleriana
THA.LOC104812096 Tarenaya hassleriana
THA.LOC104822946 Tarenaya hassleriana
Thecc.02G335400 Theobroma cacao
Thecc.03G096000 Theobroma cacao
Thecc.04G090700 Theobroma cacao
Thhalv10005526m.g Eutrema salsugineum
Thhalv10019012m.g Eutrema salsugineum
Thhalv10019026m.g Eutrema salsugineum
TPR.G24443 Trifolium pratense
TPR.G26181 Trifolium pratense
TWI15G0650 Tripterygium wilfordii
TWI32G1146 Tripterygium wilfordii
TWI34G0828 Tripterygium wilfordii
TWI34G2033 Tripterygium wilfordii
TWI60G0384 Tripterygium wilfordii
TWI81G0269 Tripterygium wilfordii
unitig_52.g17601 Utricularia gibba
unitig_748.g8432 Utricularia gibba
vmacro05666 Vaccinium macrocarpon
VMungo0251G3032 Vigna mungo
VMungo0464G1429 Vigna mungo
VMungo0464G2038 Vigna mungo
VMungo1215G3074 Vigna mungo
VMungo1383G3129 Vigna mungo
Zm00001eb020360 Zea mays
Zm00001eb393270 Zea mays
Zm00001eb400420 Zea mays

User provided reference genes

Program Settings