Gene: COL.COLO4_21374

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_21374
  • Transcript Identifier COL.rna20127
  • Gene Type Coding gene
  • Location AWUE01017651.1 : 12606-13403 : positive

Gene Family Information

  • ID HOM05D002141
  • #Genes/#Species 313/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna20127
  • GenBank OMO85909.1
  • id gene21346
  • gene_name COLO4_21374
  • uniprot A0A1R3ITJ4

Descriptions

  • Description Zinc finger, RING/FYVE/PHD-type
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination AT3G29270

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT3G29270

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027370 RING-type zinc-finger, LisH dimerisation motif
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-HC-class E3 ligase