Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p10490 Brassica napus
A10p11540 Brassica napus
A10p23480 Brassica napus
Aa31LG11G14150 Aethionema arabicum
Aa31LG3G10210 Aethionema arabicum
Actinidia01966 Actinidia chinensis
Actinidia01973 Actinidia chinensis
Actinidia05145 Actinidia chinensis
Actinidia09973 Actinidia chinensis
Actinidia17572 Actinidia chinensis
Actinidia26243 Actinidia chinensis
Actinidia39406 Actinidia chinensis
Actinidia39408 Actinidia chinensis
Ah.06g183520 Amaranthus hybridus
Ah.12g062590 Amaranthus hybridus
AL6G26270 Arabidopsis lyrata
AL8G29580 Arabidopsis lyrata
Aqoxy1G03890 Aquilegia oxysepala
Aqoxy3G03560 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4KXQ87 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4S0H6B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.51I078 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AT8QW9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CQ6HPX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YA5RRX Arachis hypogaea
AT5G15410 Arabidopsis thaliana
AT5G54250 Arabidopsis thaliana
ATR0111G032 Amborella trichopoda
ATR0693G256 Amborella trichopoda
Atru.chr2.1054 Acer truncatum
Atru.chr2.2932 Acer truncatum
Atru.chr8.377 Acer truncatum
AUR62015593 Chenopodium quinoa
AUR62018142 Chenopodium quinoa
AUR62029304 Chenopodium quinoa
AUR62042559 Chenopodium quinoa
BcaB05g22116 Brassica carinata
BcaB08g35780 Brassica carinata
BcaC03g14339 Brassica carinata
BcaC04g20359 Brassica carinata
BcaNung03310 Brassica carinata
BolC2t07827H Brassica oleracea
BolC2t07834H Brassica oleracea
BolC9t57325H Brassica oleracea
BolC9t59010H Brassica oleracea
BraA02t06112Z Brassica rapa
BraA10t43248Z Brassica rapa
BraA10t44415Z Brassica rapa
C02p17260 Brassica napus
C09p44530 Brassica napus
C09p61710 Brassica napus
CAN.G1110.42 Capsicum annuum
CAN.G206.196 Capsicum annuum
CAN.G443.7 Capsicum annuum
CANSAT11G1298 Cannabis sativa
CANSAT56G4025 Cannabis sativa
CANSAT64G0581 Cannabis sativa
CARHR197900 Cardamine hirsuta
CARHR267530 Cardamine hirsuta
Carub.0006s1358 Capsella rubella
Carub.0008s1459 Capsella rubella
Ca_01799_v3 Cicer arietinum L.
Ca_06804_v3 Cicer arietinum L.
Ca_23099_v3 Cicer arietinum L.
Cc05_g12730 Coffea canephora
Cc07_g03850 Coffea canephora
Cc07_g03860 Coffea canephora
Cfa007622 Carpinus fangiana
Cfa013592 Carpinus fangiana
Cfa013593 Carpinus fangiana
Cfa020501 Carpinus fangiana
Ciclev10010507m.g Citrus clementina
Ciclev10011184m.g Citrus clementina
Ciclev10011242m.g Citrus clementina
CiPaw.03G091600 Carya illinoinensis
CiPaw.04G058800 Carya illinoinensis
CiPaw.07G184500 Carya illinoinensis
CiPaw.11G177200 Carya illinoinensis
CiPaw.12G123100 Carya illinoinensis
CiPaw.15G119300 Carya illinoinensis
ClCG07G017020 Citrullus lanatus
ClCG10G006450 Citrullus lanatus
ClCG11G004620 Citrullus lanatus
COL.COLO4_07428 Corchorus olitorius
COL.COLO4_09486 Corchorus olitorius
COL.COLO4_21371 Corchorus olitorius
COL.COLO4_21372 Corchorus olitorius
Cpa.g.sc12.38 Carica papaya
Cpa.g.sc14.141 Carica papaya
Cpa.g.sc14.142 Carica papaya
CsaV3_3G005930 Cucumis sativus L.
CsaV3_5G038390 Cucumis sativus L.
CSS0009066 Camellia sinensis var. sinensis
CSS0027865 Camellia sinensis var. sinensis
CSS0040776 Camellia sinensis var. sinensis
CSS0042780 Camellia sinensis var. sinensis
DCAR_009987 Daucus carota
DCAR_011060 Daucus carota
DCAR_011061 Daucus carota
DCAR_016955 Daucus carota
DCAR_016957 Daucus carota
DCAR_016959 Daucus carota
DCAR_022489 Daucus carota
DCAR_023756 Daucus carota
DCAR_025405 Daucus carota
DCAR_026659 Daucus carota
DCAR_026661 Daucus carota
Dinv08348 Davidia involucrata
Dinv11489 Davidia involucrata
Dinv22361 Davidia involucrata
Dinv33808 Davidia involucrata
Duzib147G0988 Durio zibethinus
Duzib147G1673 Durio zibethinus
Duzib187G1279 Durio zibethinus
Duzib213G0743 Durio zibethinus
Duzib268G0965 Durio zibethinus
ECA238G0221 Erigeron canadensis
ECA240G0202 Erigeron canadensis
ECA240G1105 Erigeron canadensis
ECA240G2297 Erigeron canadensis
EL10Ac1g00059 Beta vulgaris
EL10Ac4g08050 Beta vulgaris
Eucgr.F03358 Eucalyptus grandis
Eucgr.I01988 Eucalyptus grandis
Eucgr.J01368 Eucalyptus grandis
FAN01G2494 Fragaria x ananassa
FAN02G4329 Fragaria x ananassa
FAN03G2276 Fragaria x ananassa
FAN05G0545 Fragaria x ananassa
FAN06G2195 Fragaria x ananassa
FAN09G1176 Fragaria x ananassa
FAN09G1768 Fragaria x ananassa
FAN10G3845 Fragaria x ananassa
FAN11G2586 Fragaria x ananassa
FAN14G1421 Fragaria x ananassa
FAN16G3515 Fragaria x ananassa
FAN21G3364 Fragaria x ananassa
FAN25G2307 Fragaria x ananassa
FvH4_3g21060 Fragaria vesca
FvH4_6g47520 Fragaria vesca
FvH4_7g26890 Fragaria vesca
Glyma.06G271200 Glycine max
Glyma.08G241600 Glycine max
Glyma.12G133700 Glycine max
Glyma.12G219000 Glycine max
Glyma.18G263900 Glycine max
Gohir.A01G069000 Gossypium hirsutum
Gohir.A05G369900 Gossypium hirsutum
Gohir.A09G011800 Gossypium hirsutum
Gohir.A09G012000 Gossypium hirsutum
Gohir.D01G056500 Gossypium hirsutum
Gohir.D04G045400 Gossypium hirsutum
Gohir.D09G010800 Gossypium hirsutum
Gohir.D09G010900 Gossypium hirsutum
Gorai.002G076600 Gossypium raimondii
Gorai.006G012500 Gossypium raimondii
Gorai.006G012600 Gossypium raimondii
Gorai.012G050600 Gossypium raimondii
GSVIVG01011487001 Vitis vinifera
GSVIVG01014442001 Vitis vinifera
HanXRQChr02g0031401 Helianthus annuus
HanXRQChr02g0031411 Helianthus annuus
HanXRQChr03g0071771 Helianthus annuus
HanXRQChr03g0077231 Helianthus annuus
HanXRQChr09g0246101 Helianthus annuus
HanXRQChr09g0246121 Helianthus annuus
HanXRQChr14g0448691 Helianthus annuus
Haze_09541 Corylus avellana
Haze_14473 Corylus avellana
Haze_22209 Corylus avellana
Hma1.2p1_1176F.1_g264180 Hydrangea macrophylla
Hma1.2p1_1176F.1_g264190 Hydrangea macrophylla
Hma1.2p1_1813F.1_g303830 Hydrangea macrophylla
Hma1.2p1_3044F.1_g332090 Hydrangea macrophylla
Hma1.2p1_3790F.1_g337625 Hydrangea macrophylla
HPP92_000918 Vanilla planifolia
HPP92_000919 Vanilla planifolia
HPP92_014242 Vanilla planifolia
HPP92_026503 Vanilla planifolia
HPP92_026504 Vanilla planifolia
Hund15563 Selenicereus undatus
Lalb_Chr01g0017041 Lupinus albus
Lalb_Chr03g0030381 Lupinus albus
Lalb_Chr04g0258531 Lupinus albus
Lalb_Chr04g0258541 Lupinus albus
Lalb_Chr10g0093231 Lupinus albus
Lalb_Chr25g0286811 Lupinus albus
Lj1A853T84 Lonicera japonica
Lj1g0002587 Lotus japonicus
Lj3g0006951 Lotus japonicus
Lj3g0026637 Lotus japonicus
Lj4A115T88 Lonicera japonica
Lj4C115T16 Lonicera japonica
Lj4C115T18 Lonicera japonica
Lj8A161T40 Lonicera japonica
Lju41A7T37 Lonicera japonica
Lsat_1_v5_gn_0_5240 Lactuca sativa
Lsat_1_v5_gn_0_5260 Lactuca sativa
Lsat_1_v5_gn_2_87960 Lactuca sativa
Lsat_1_v5_gn_7_106621 Lactuca sativa
Lsat_1_v5_gn_7_78601 Lactuca sativa
Lsat_1_v5_gn_9_119321 Lactuca sativa
Manes.01G099300 Manihot esculenta
Manes.02G051000 Manihot esculenta
Manes.02G051100 Manihot esculenta
Manes.03G116800 Manihot esculenta
Manes.15G082700 Manihot esculenta
Mapoly0011s0149 Marchantia polymorpha
MBI02_g39344_MAGBIO Magnolia biondii
MD03G1218000 Malus domestica
MD07G1248200 Malus domestica
MD09G1061000 Malus domestica
MD11G1235800 Malus domestica
MD17G1056400 Malus domestica
Medtr2g081110 Medicago truncatula
Medtr7g012260 Medicago truncatula
Medtr8g464570 Medicago truncatula
MELO3C016558.2 Cucumis melo
MELO3C022020.2 Cucumis melo
Migut.H00655 Erythranthe guttata
Migut.J01142 Erythranthe guttata
Migut.K01295 Erythranthe guttata
Migut.M01856 Erythranthe guttata
MSTRG.15201 Avicennia marina
MSTRG.3023 Avicennia marina
Nitab4.5_0000092g0320 Nicotiana tabacum
Nitab4.5_0000207g0310 Nicotiana tabacum
Nitab4.5_0000565g0070 Nicotiana tabacum
Nitab4.5_0001320g0080 Nicotiana tabacum
Nitab4.5_0001386g0020 Nicotiana tabacum
Nitab4.5_0004545g0010 Nicotiana tabacum
Nitab4.5_0029433g0010 Nicotiana tabacum
Nn1g03882 Nelumbo nucifera
Nn1g06770 Nelumbo nucifera
Nn3g17375 Nelumbo nucifera
Nn4g23339 Nelumbo nucifera
Oeu055683.1 Olea europaea
Oeu055684.1 Olea europaea
Oeu062143.1 Olea europaea
Os01g0782800 Oryza sativa ssp. japonica
Os03g0758300 Oryza sativa ssp. japonica
Os05g0502000 Oryza sativa ssp. japonica
Peaxi162Scf00000g76017 Petunia axillaris
Peaxi162Scf00166g00824 Petunia axillaris
PGR004G1300 Punica granatum
PGR031G3257 Punica granatum
PGR083G1869 Punica granatum
PGSC0003DMG400001441 Solanum tuberosum
PGSC0003DMG400025027 Solanum tuberosum
Phvul.008G036200 Phaseolus vulgaris
Phvul.011G137200 Phaseolus vulgaris
Phvul.L001962 Phaseolus vulgaris
Potri.001G407800 Populus trichocarpa
Potri.017G089800 Populus trichocarpa
Potri.017G089900 Populus trichocarpa
Pp3c15_11518 Physcomitrium patens
Pp3c15_18460 Physcomitrium patens
Pp3c15_7250 Physcomitrium patens
Pp3c9_2580 Physcomitrium patens
Prupe.2G272100 Prunus persica
Prupe.3G259100 Prunus persica
Prupe.4G191200 Prunus persica
Psat0s3419g0040 Pisum sativum
Psat3g198400 Pisum sativum
Psat5g247160 Pisum sativum
PSO210G2201 Papaver somniferum
PSO339G3069 Papaver somniferum
PSO384G2990 Papaver somniferum
PSO541G6490 Papaver somniferum
PSO675G1758 Papaver somniferum
PSO832G1882 Papaver somniferum
QL02p039399 Quercus lobata
QL02p039656 Quercus lobata
QL08p017607 Quercus lobata
QL09p027806 Quercus lobata
RcHm_v2.0_Chr1g0373561 Rosa chinensis
RcHm_v2.0_Chr2g0166581 Rosa chinensis
RcHm_v2.0_Chr5g0036081 Rosa chinensis
RcHm_v2.0_Chr5g0036091 Rosa chinensis
Rhsim06G0192600 Rhododendron simsii
Rhsim08G0073400 Rhododendron simsii
Rhsim10G0046800 Rhododendron simsii
Sabra04G0066200 Salix brachista
Sabra16G0271100 Salix brachista
Sabra17G0079000 Salix brachista
SalBow1G1307 Salvia bowleyana
SalBow8G4936 Salvia bowleyana
Sc03g0009570 Simmondsia chinensis
Sc07g0002660 Simmondsia chinensis
Sc07g0002670 Simmondsia chinensis
Sc10g0003310 Simmondsia chinensis
Sed0004368 Sechium edule
Sed0006834 Sechium edule
Sed0016242 Sechium edule
SEGI_04819 Sequoiadendron giganteum
SEGI_20140 Sequoiadendron giganteum
SGA_v2.0_scaffold148G36487 Striga asiatica
SGA_v2.0_scaffold4755G54531 Striga asiatica
SGA_v2.0_scaffold73G24321 Striga asiatica
SMO351G0497 Selaginella moellendorffii
Solyc02g088560.4 Solanum lycopersicum
Solyc10g006800.4 Solanum lycopersicum
Solyc12g005400.3 Solanum lycopersicum
Sopen02g033280 Solanum pennellii
Sopen10g002720 Solanum pennellii
Sopen12g001370 Solanum pennellii
Sp6g16290 Schrenkiella parvula
Sp6g28680 Schrenkiella parvula
TAR371G0724 Trochodendron aralioides
TAR371G0981 Trochodendron aralioides
TAR626G0417 Trochodendron aralioides
TAR626G1152 Trochodendron aralioides
TAR629G2304 Trochodendron aralioides
THA.LOC104821010 Tarenaya hassleriana
THA.LOC104822344 Tarenaya hassleriana
Thecc.04G090500 Theobroma cacao
Thecc.04G090600 Theobroma cacao
Thecc.07G070600 Theobroma cacao
Thhalv10012798m.g Eutrema salsugineum
Thhalv10012835m.g Eutrema salsugineum
Thhalv10014149m.g Eutrema salsugineum
TPR.G1190 Trifolium pratense
TPR.G18447 Trifolium pratense
TPR.G18945 Trifolium pratense
TPR.G27309 Trifolium pratense
TPR.G32865 Trifolium pratense
TPR.G33461 Trifolium pratense
TWI32G0070 Tripterygium wilfordii
TWI38G1424 Tripterygium wilfordii
TWI39G0942 Tripterygium wilfordii
TWI60G0098 Tripterygium wilfordii
unitig_37.g12578 Utricularia gibba
vmacro05667 Vaccinium macrocarpon
vmacro11811 Vaccinium macrocarpon
vmacro18162 Vaccinium macrocarpon
VMungo1080G1206 Vigna mungo
VMungo1127G1620 Vigna mungo
VMungo1383G1493 Vigna mungo
Zm00001eb057860 Zea mays
Zm00001eb214540 Zea mays
Zm00001eb292010 Zea mays
Zm00001eb369820 Zea mays

User provided reference genes

Program Settings