Gene: Solyc02g088560.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc02g088560.4
- Transcript Identifier Solyc02g088560.4.1
- Gene Type Coding gene
- Location SL4.0ch02 : 48656185-48659647 : negative
Gene Family Information
- ID HOM05D000122
- #Genes/#Species 2793/98
- Phylogenetic origin
- ID ORTHO05D001883
- #Genes/#Species 342/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc02g088560.4.1
- uniprot A0A3Q7F946
- gene_id Solyc02g088560
Descriptions
- Description Cyclic nucleotide-gated ion channel protein, putative (AHRD V3.3 *** G7L453_MEDTR)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009626 | ISO | PLAZA Integrative Orthology | plant-type hypersensitive response | AT5G15410 |
| GO:0006952 | ISO | PLAZA Integrative Orthology | defense response | AT5G15410 |
| GO:0007263 | ISO | PLAZA Integrative Orthology | nitric oxide mediated signal transduction | AT5G15410 |
| GO:0070509 | ISO | PLAZA Integrative Orthology | calcium ion import | AT5G15410 |
| GO:0006811 | IEA | GOA Database | ion transport | |
| GO:0006811 | IEA | InterPro | ion transport | |
| GO:0055085 | IEA | GOA Database | transmembrane transport | |
| GO:0055085 | IEA | InterPro | transmembrane transport | |
| GO:0034220 | IEA | GOA Database | ion transmembrane transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005216 | IEA | GOA Database | ion channel activity | |
| GO:0005216 | IEA | InterPro | ion channel activity | |
| GO:0005221 | ISO | PLAZA Integrative Orthology | intracellular cyclic nucleotide activated cation channel activity | AT5G15410 |
| GO:0005222 | ISO | PLAZA Integrative Orthology | intracellular cAMP-activated cation channel activity | AT5G15410 |
| GO:0005242 | ISO | PLAZA Integrative Orthology | inward rectifier potassium channel activity | AT5G15410 |
| GO:0005262 | ISO | PLAZA Integrative Orthology | calcium channel activity | AT5G15410 |
| GO:0005516 | ISO | PLAZA Integrative Orthology | calmodulin binding | AT5G15410 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |