Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p28060 Brassica napus
A06p00760 Brassica napus
A09p30200 Brassica napus
Aa31LG1G10850 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1866 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1922 Anthoceros agrestis
Actinidia00224 Actinidia chinensis
Actinidia03498 Actinidia chinensis
Actinidia29436 Actinidia chinensis
Ah.16g110200 Amaranthus hybridus
Ah.16g110210 Amaranthus hybridus
Ah.16g110220 Amaranthus hybridus
AL6G42300 Arabidopsis lyrata
AL6G42310 Arabidopsis lyrata
Aqoxy5G02436 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0IU8HI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.208RF6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.31U2MU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.90BUAB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CSX36S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M0U3K5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P9RAT5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S1M1U3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SQ16A9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VC957H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XPKP8Y Arachis hypogaea
AT4G08470 Arabidopsis thaliana
AT4G08480 Arabidopsis thaliana
AT4G08500 Arabidopsis thaliana
ATR0171G032 Amborella trichopoda
Atru.chr13.1320 Acer truncatum
Atru.chr13.1364 Acer truncatum
Atru.chr6.1001 Acer truncatum
AUR62004697 Chenopodium quinoa
AUR62023613 Chenopodium quinoa
BcaB01g01347 Brassica carinata
BcaB01g02458 Brassica carinata
BcaB01g02860 Brassica carinata
BcaB06g26628 Brassica carinata
BcaB06g26629 Brassica carinata
BcaC01g04771 Brassica carinata
BcaC01g06757 Brassica carinata
BcaC04g20908 Brassica carinata
BcaC08g43558 Brassica carinata
BcaC08g43559 Brassica carinata
BolC3t15705H Brassica oleracea
BolC3t16074H Brassica oleracea
BolC6t36032H Brassica oleracea
BolC9t56645H Brassica oleracea
BraA03t12019Z Brassica rapa
BraA06t23310Z Brassica rapa
BraA09t38584Z Brassica rapa
C03p33920 Brassica napus
C03p37850 Brassica napus
C06p09580 Brassica napus
C06p09590 Brassica napus
C06p09600 Brassica napus
C09p38090 Brassica napus
CAN.G1352.17 Capsicum annuum
CAN.G640.22 Capsicum annuum
CANSAT25G3599 Cannabis sativa
CARHR253350 Cardamine hirsuta
CARHR254210 Cardamine hirsuta
CARHR259530 Cardamine hirsuta
Carub.0006s2702 Capsella rubella
Carub.0006s2703 Capsella rubella
Carub.0006s2704 Capsella rubella
Ca_18314_v3 Cicer arietinum L.
Ca_25759_v3 Cicer arietinum L.
Ca_26610_v3 Cicer arietinum L.
CBR_g11987 Chara braunii
Cc00_g07840 Coffea canephora
Cc02_g22220 Coffea canephora
CDE06G0231 Ceratophyllum demersum
CDE06G0589 Ceratophyllum demersum
CDE06G1761 Ceratophyllum demersum
Cfa005547 Carpinus fangiana
Cfa015961 Carpinus fangiana
Ciclev10002831m.g Citrus clementina
CiPaw.05G228400 Carya illinoinensis
CiPaw.06G025200 Carya illinoinensis
CiPaw.06G149200 Carya illinoinensis
ClCG03G009250 Citrullus lanatus
Cpa.g.sc49.131 Carica papaya
CsaV3_5G023410 Cucumis sativus L.
CSS0002840 Camellia sinensis var. sinensis
CSS0005247 Camellia sinensis var. sinensis
CSS0017611 Camellia sinensis var. sinensis
CSS0024004 Camellia sinensis var. sinensis
CSS0045255 Camellia sinensis var. sinensis
CSS0046727 Camellia sinensis var. sinensis
CSS0049481 Camellia sinensis var. sinensis
DCAR_014285 Daucus carota
DCAR_014286 Daucus carota
DCAR_014287 Daucus carota
DCAR_014793 Daucus carota
DCAR_023127 Daucus carota
Dinv24258 Davidia involucrata
Dinv26714 Davidia involucrata
Dinv27381 Davidia involucrata
Duzib041G0740 Durio zibethinus
Duzib093G0386 Durio zibethinus
Duzib116G0173 Durio zibethinus
ECA232G2685 Erigeron canadensis
ECA234G0683 Erigeron canadensis
ECA236G3205 Erigeron canadensis
ECA240G4029 Erigeron canadensis
EL10Ac1g00035 Beta vulgaris
Eucgr.C01389 Eucalyptus grandis
Eucgr.C01391 Eucalyptus grandis
Eucgr.C01392 Eucalyptus grandis
Eucgr.E03542 Eucalyptus grandis
Eucgr.E03547 Eucalyptus grandis
Eucgr.F03729 Eucalyptus grandis
Eucgr.F03743 Eucalyptus grandis
Eucgr.G00622 Eucalyptus grandis
Eucgr.G00623 Eucalyptus grandis
Eucgr.G00624 Eucalyptus grandis
Eucgr.G00625 Eucalyptus grandis
Eucgr.G00627 Eucalyptus grandis
Eucgr.G00630 Eucalyptus grandis
Eucgr.G00631 Eucalyptus grandis
Eucgr.G00632 Eucalyptus grandis
FAN03G1191 Fragaria x ananassa
FAN04G0352 Fragaria x ananassa
FAN08G0720 Fragaria x ananassa
FAN08G1069 Fragaria x ananassa
FAN11G0103 Fragaria x ananassa
FAN13G1482 Fragaria x ananassa
FAN13G2464 Fragaria x ananassa
FAN18G0156 Fragaria x ananassa
FAN18G0579 Fragaria x ananassa
FAN18G0939 Fragaria x ananassa
FAN18G1008 Fragaria x ananassa
FAN18G1996 Fragaria x ananassa
FAN21G0610 Fragaria x ananassa
FvH4_2g26161 Fragaria vesca
FvH4_2g26162 Fragaria vesca
FvH4_3g43920 Fragaria vesca
FvH4_3g44020 Fragaria vesca
FvH4_3g44041 Fragaria vesca
FvH4_5g29850 Fragaria vesca
FvH4_5g38970 Fragaria vesca
Glyma.01G143400 Glycine max
Glyma.04G253500 Glycine max
Glyma.05G123200 Glycine max
Glyma.06G108900 Glycine max
Glyma.08G078200 Glycine max
Glyma.13G084100 Glycine max
Glyma.14G165700 Glycine max
Glyma.14G166000 Glycine max
Glyma.15G048500 Glycine max
Glyma.15G048600 Glycine max
Gohir.A02G074800 Gossypium hirsutum
Gohir.A05G232100 Gossypium hirsutum
Gohir.D02G081800 Gossypium hirsutum
Gohir.D05G234350 Gossypium hirsutum
Gorai.005G091700 Gossypium raimondii
Gorai.009G242600 Gossypium raimondii
GSVIVG01008938001 Vitis vinifera
GSVIVG01013909001 Vitis vinifera
GSVIVG01023033001 Vitis vinifera
GSVIVG01023037001 Vitis vinifera
GSVIVG01023048001 Vitis vinifera
GSVIVG01023068001 Vitis vinifera
GSVIVG01023079001 Vitis vinifera
GSVIVG01038760001 Vitis vinifera
HanXRQChr01g0021891 Helianthus annuus
HanXRQChr03g0066551 Helianthus annuus
HanXRQChr09g0260141 Helianthus annuus
HanXRQChr10g0290471 Helianthus annuus
HanXRQChr11g0326291 Helianthus annuus
HanXRQChr11g0337401 Helianthus annuus
HanXRQChr14g0438781 Helianthus annuus
Haze_00521 Corylus avellana
Haze_01622 Corylus avellana
Hma1.2p1_0009F.1_g005920 Hydrangea macrophylla
Hma1.2p1_0557F.1_g178300 Hydrangea macrophylla
Hma1.2p1_2850F.1_g329420 Hydrangea macrophylla
HPP92_002185 Vanilla planifolia
HPP92_016284 Vanilla planifolia
HPP92_016301 Vanilla planifolia
HPP92_027202 Vanilla planifolia
HPP92_027699 Vanilla planifolia
HPP92_027707 Vanilla planifolia
Hund16823 Selenicereus undatus
Hund27055 Selenicereus undatus
Hund27057 Selenicereus undatus
Lalb_Chr10g0101991 Lupinus albus
Lalb_Chr11g0065711 Lupinus albus
Lalb_Chr12g0208651 Lupinus albus
Lj1g0005761 Lotus japonicus
Lj4A582G47 Lonicera japonica
Lj4g0005853 Lotus japonicus
Lj5A247G17 Lonicera japonica
Lj6g0027947 Lotus japonicus
Lsat_1_v5_gn_4_135540 Lactuca sativa
Lsat_1_v5_gn_5_109501 Lactuca sativa
Lsat_1_v5_gn_7_78081 Lactuca sativa
Lsat_1_v5_gn_9_116481 Lactuca sativa
Manes.02G158900 Manihot esculenta
Manes.07G012800 Manihot esculenta
Manes.10G109423 Manihot esculenta
Manes.10G132600 Manihot esculenta
Mapoly0020s0024 Marchantia polymorpha
Mapoly0024s0060 Marchantia polymorpha
Mapoly0030s0030 Marchantia polymorpha
MapolyY_A0020 Marchantia polymorpha
MBI03_g11142_MAGBIO Magnolia biondii
MBI06_g01051_MAGBIO Magnolia biondii
MD02G1097900 Malus domestica
MD08G1173000 Malus domestica
MD08G1227000 Malus domestica
MD15G1358300 Malus domestica
MD15G1419300 Malus domestica
Medtr0685s0020 Medicago truncatula
Medtr3g073250 Medicago truncatula
Medtr3g073260 Medicago truncatula
Medtr4g094415 Medicago truncatula
Medtr5g059880 Medicago truncatula
Medtr5g059910 Medicago truncatula
Medtr5g059940 Medicago truncatula
Medtr5g060350 Medicago truncatula
MELO3C022777.2 Cucumis melo
Migut.C01188 Erythranthe guttata
Migut.N01030 Erythranthe guttata
MSTRG.1484 Avicennia marina
MSTRG.22427 Avicennia marina
MSTRG.27838 Avicennia marina
Nitab4.5_0004005g0030 Nicotiana tabacum
Nitab4.5_0004360g0030 Nicotiana tabacum
Nitab4.5_0005539g0040 Nicotiana tabacum
Nitab4.5_0006653g0040 Nicotiana tabacum
Nn1g04697 Nelumbo nucifera
Nn1g08559 Nelumbo nucifera
Nn1g08561 Nelumbo nucifera
Nn5g27971 Nelumbo nucifera
Oeu012740.1 Olea europaea
Oeu014693.1 Olea europaea
Oeu032963.3 Olea europaea
Oeu039107.1 Olea europaea
Oeu043788.2 Olea europaea
Oeu050266.1 Olea europaea
Oeu061383.1 Olea europaea
Os02g0769800 Oryza sativa ssp. japonica
Os03g0262200 Oryza sativa ssp. japonica
Os03g0703400 Oryza sativa ssp. japonica
Os04g0339800 Oryza sativa ssp. japonica
Peaxi162Scf00007g01727 Petunia axillaris
Peaxi162Scf00011g00029 Petunia axillaris
PGR042G1512 Punica granatum
PGR042G3319 Punica granatum
PGR044G2514 Punica granatum
PGSC0003DMG400023742 Solanum tuberosum
PGSC0003DMG401026149 Solanum tuberosum
PGSC0003DMG402026149 Solanum tuberosum
Phvul.002G202400 Phaseolus vulgaris
Phvul.006G211800 Phaseolus vulgaris
Phvul.006G212500 Phaseolus vulgaris
Phvul.008G168100 Phaseolus vulgaris
Phvul.009G025700 Phaseolus vulgaris
Potri.002G088900 Populus trichocarpa
Potri.005G172200 Populus trichocarpa
Pp3c11_21820 Physcomitrium patens
Pp3c11_21880 Physcomitrium patens
Pp3c17_22790 Physcomitrium patens
Pp3c1_10860 Physcomitrium patens
Pp3c4_4230 Physcomitrium patens
Pp3c7_4010 Physcomitrium patens
Prupe.1G505700 Prunus persica
Prupe.1G505800 Prunus persica
Prupe.1G564100 Prunus persica
Prupe.7G007900 Prunus persica
Psat2g076840 Pisum sativum
Psat2g078320 Pisum sativum
Psat5g135400 Pisum sativum
Psat7g094400 Pisum sativum
PSO017G3778 Papaver somniferum
PSO170G4304 Papaver somniferum
PSO170G5486 Papaver somniferum
QL04p027067 Quercus lobata
QL04p027232 Quercus lobata
QL04p027395 Quercus lobata
QL09p037356 Quercus lobata
QL11p019251 Quercus lobata
RcHm_v2.0_Chr1g0326041 Rosa chinensis
RcHm_v2.0_Chr1g0352161 Rosa chinensis
RcHm_v2.0_Chr5g0079491 Rosa chinensis
RcHm_v2.0_Chr5g0080131 Rosa chinensis
RcHm_v2.0_Chr5g0080301 Rosa chinensis
RcHm_v2.0_Chr6g0294571 Rosa chinensis
RcHm_v2.0_Chr7g0213001 Rosa chinensis
RcHm_v2.0_Chr7g0223451 Rosa chinensis
RcHm_v2.0_Chr7g0240941 Rosa chinensis
Rhsim05G0038100 Rhododendron simsii
Rhsim05G0066300 Rhododendron simsii
Rhsim11G0065600 Rhododendron simsii
Rhsim11G0132100 Rhododendron simsii
Rhsim11G0132200 Rhododendron simsii
Sabra02G0070000 Salix brachista
Sabra05G0129700 Salix brachista
Sabra17G0018100 Salix brachista
Sabra17G0018200 Salix brachista
Sabra17G0018300 Salix brachista
Sabra17G0018400 Salix brachista
Sabra17G0018500 Salix brachista
Sabra17G0018700 Salix brachista
Sabra17G0019000 Salix brachista
SalBow6G1611 Salvia bowleyana
SalBow6G3900 Salvia bowleyana
SalBow7G2654 Salvia bowleyana
Sc01g0001530 Simmondsia chinensis
Sc23g0000900 Simmondsia chinensis
Sed0013583 Sechium edule
Sed0019759 Sechium edule
SEGI_27281 Sequoiadendron giganteum
SEGI_33181 Sequoiadendron giganteum
SEGI_40622 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32435 Striga asiatica
SGA_v2.0_scaffold22G09809 Striga asiatica
SGA_v2.0_scaffold24G10501 Striga asiatica
SGA_v2.0_scaffold28G12027 Striga asiatica
SGA_v2.0_scaffold386G50501 Striga asiatica
SGA_v2.0_scaffold386G50503 Striga asiatica
SMO196G0145 Selaginella moellendorffii
SMO356G0639 Selaginella moellendorffii
SMO367G0326 Selaginella moellendorffii
SMO367G0676 Selaginella moellendorffii
Solyc01g104530.3 Solanum lycopersicum
Solyc07g053170.4 Solanum lycopersicum
Sopen01g047040 Solanum pennellii
Sopen07g026720 Solanum pennellii
Sp6g09370 Schrenkiella parvula
Sp6g09410 Schrenkiella parvula
TAR376G0100 Trochodendron aralioides
TAR624G1272 Trochodendron aralioides
TAR628G1287 Trochodendron aralioides
THA.LOC104807027 Tarenaya hassleriana
THA.LOC104817008 Tarenaya hassleriana
Thecc.08G117200 Theobroma cacao
Thhalv10028523m.g Eutrema salsugineum
TPR.G30428 Trifolium pratense
TPR.G32940 Trifolium pratense
TPR.G32960 Trifolium pratense
TWI12G0717 Tripterygium wilfordii
TWI56G1369 Tripterygium wilfordii
TWI59G0759 Tripterygium wilfordii
unitig_26.g9917 Utricularia gibba
unitig_26.g9918 Utricularia gibba
vmacro00797 Vaccinium macrocarpon
vmacro01789 Vaccinium macrocarpon
vmacro22644 Vaccinium macrocarpon
vmacro22645 Vaccinium macrocarpon
VMungo0251G2030 Vigna mungo
VMungo0251G2189 Vigna mungo
VMungo0540G2007 Vigna mungo
VMungo0647G1263 Vigna mungo
VMungo1309G2019 Vigna mungo
Zm00001eb011480 Zea mays
Zm00001eb054290 Zea mays
Zm00001eb193510 Zea mays
Zm00001eb216720 Zea mays
Zm00001eb398160 Zea mays

User provided reference genes

Program Settings