Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p32560 Brassica napus
A02p37690 Brassica napus
A06p10680 Brassica napus
A06p38960 Brassica napus
A07p06030 Brassica napus
A09p04600 Brassica napus
A09p61980 Brassica napus
Aa31LG10G10800 Aethionema arabicum
Aa31LG1G450 Aethionema arabicum
Aa31LG2G7930 Aethionema arabicum
Aa31sc37G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2914 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.628 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2281 Anthoceros agrestis
Actinidia09476 Actinidia chinensis
Actinidia23718 Actinidia chinensis
Actinidia30068 Actinidia chinensis
Actinidia37486 Actinidia chinensis
Ah.03g147270 Amaranthus hybridus
AL1G26600 Arabidopsis lyrata
AL5G11180 Arabidopsis lyrata
AL8G21800 Arabidopsis lyrata
Aqoxy3G04044 Aquilegia oxysepala
Aqoxy3G04050_Aqoxy3G04051 Aquilegia oxysepala
Aqoxy5G00010 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5QEX77 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.74LDE2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CL5R4G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ES5X1M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FUXK5I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M88YV2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NIIH12 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NLS2AK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RN5M7S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YNYX6A Arachis hypogaea
AT1G14630 Arabidopsis thaliana
AT2G01990 Arabidopsis thaliana
AT5G48720 Arabidopsis thaliana
ATR1147G016 Amborella trichopoda
Atru.chr1.3187 Acer truncatum
Atru.chr11.978 Acer truncatum
Atru.chr9.2214 Acer truncatum
AUR62001103 Chenopodium quinoa
AUR62003488 Chenopodium quinoa
AUR62008928 Chenopodium quinoa
AUR62017797 Chenopodium quinoa
BcaB02g06532 Brassica carinata
BcaB07g30041 Brassica carinata
BcaB07g30363 Brassica carinata
BcaC03g17106 Brassica carinata
BcaC03g17671 Brassica carinata
BcaC04g23764 Brassica carinata
BcaC05g25378 Brassica carinata
BcaC06g30764 Brassica carinata
BcaC07g41555 Brassica carinata
BolC2t11091H Brassica oleracea
BolC2t11746H Brassica oleracea
BolC5t30003H Brassica oleracea
BolC7t44457H Brassica oleracea
BolC8t52109H Brassica oleracea
BolC9t53420H Brassica oleracea
BraA02t08274Z Brassica rapa
BraA02t08751Z Brassica rapa
BraA06t24248Z Brassica rapa
BraA06t24250Z Brassica rapa
BraA06t26810Z Brassica rapa
BraA09t36096Z Brassica rapa
C02p50130 Brassica napus
C02p56780 Brassica napus
C05p12590 Brassica napus
C07p39370 Brassica napus
C08p45560 Brassica napus
C09p04920 Brassica napus
CAN.G1402.7 Capsicum annuum
CAN.G282.91 Capsicum annuum
CANSAT01G2234 Cannabis sativa
CANSAT78G0176 Cannabis sativa
CARHR015130 Cardamine hirsuta
CARHR144590 Cardamine hirsuta
CARHR183170 Cardamine hirsuta
Carub.0001s1439 Capsella rubella
Carub.0005s0100 Capsella rubella
Carub.0008s0847 Capsella rubella
Ca_17075_v3 Cicer arietinum L.
Ca_17420_v3 Cicer arietinum L.
Ca_18200_v3 Cicer arietinum L.
Ca_26921_v3 Cicer arietinum L.
Cc01_g16890 Coffea canephora
Cc03_g04120 Coffea canephora
Cc11_g05230 Coffea canephora
CDE02G1932 Ceratophyllum demersum
CDE05G2570 Ceratophyllum demersum
CDE05G2723 Ceratophyllum demersum
CDE06G0847 Ceratophyllum demersum
CDE07G0997 Ceratophyllum demersum
Cfa021194 Carpinus fangiana
Ciclev10016179m.g Citrus clementina
Ciclev10021149m.g Citrus clementina
Ciclev10028898m.g Citrus clementina
CiPaw.03G148100 Carya illinoinensis
CiPaw.04G104600 Carya illinoinensis
CiPaw.05G160300 Carya illinoinensis
ClCG01G006870 Citrullus lanatus
ClCG07G001990 Citrullus lanatus
COL.COLO4_27553 Corchorus olitorius
Cpa.g.c30279.1 Carica papaya
Cpa.g.c30279.2 Carica papaya
Cpa.g.sc8.139 Carica papaya
CsaV3_3G029960 Cucumis sativus L.
CsaV3_5G017270 Cucumis sativus L.
CSS0003003 Camellia sinensis var. sinensis
CSS0028538 Camellia sinensis var. sinensis
CSS0043801 Camellia sinensis var. sinensis
DCAR_001774 Daucus carota
DCAR_002640 Daucus carota
DCAR_004730 Daucus carota
DCAR_026837 Daucus carota
DCAR_029194 Daucus carota
DCAR_030320 Daucus carota
Dinv01909 Davidia involucrata
Dinv07026 Davidia involucrata
Dinv19191 Davidia involucrata
Duzib133G1316 Durio zibethinus
Duzib138G0574 Durio zibethinus
Duzib211G0076 Durio zibethinus
Duzib248G0765 Durio zibethinus
Duzib251G0867 Durio zibethinus
ECA234G1081 Erigeron canadensis
ECA247G1071 Erigeron canadensis
ECA248G2219 Erigeron canadensis
EL10Ac6g15384 Beta vulgaris
EL10Ac7g17856 Beta vulgaris
Eucgr.B02634 Eucalyptus grandis
Eucgr.H00791 Eucalyptus grandis
FAN07G0800 Fragaria x ananassa
FAN12G4100 Fragaria x ananassa
FAN15G3328 Fragaria x ananassa
FAN17G0989 Fragaria x ananassa
FAN22G0848 Fragaria x ananassa
FAN24G0460 Fragaria x ananassa
FAN27G2123 Fragaria x ananassa
FvH4_2g18790 Fragaria vesca
FvH4_4g35920 Fragaria vesca
Glyma.02G241700 Glycine max
Glyma.03G064200 Glycine max
Glyma.05G136600 Glycine max
Glyma.08G091800 Glycine max
Glyma.08G351100 Glycine max
Glyma.11G213200 Glycine max
Glyma.14G211400 Glycine max
Glyma.16G094900 Glycine max
Glyma.18G164900 Glycine max
Gohir.A01G144600 Gossypium hirsutum
Gohir.A04G143300 Gossypium hirsutum
Gohir.A07G157400 Gossypium hirsutum
Gohir.A07G200600 Gossypium hirsutum
Gohir.A08G195150 Gossypium hirsutum
Gohir.D01G135900 Gossypium hirsutum
Gohir.D04G186600 Gossypium hirsutum
Gohir.D07G163800 Gossypium hirsutum
Gohir.D07G206900 Gossypium hirsutum
Gohir.D08G212628 Gossypium hirsutum
Gorai.001G187500 Gossypium raimondii
Gorai.001G233300 Gossypium raimondii
Gorai.002G170200 Gossypium raimondii
Gorai.004G226300 Gossypium raimondii
Gorai.012G183000 Gossypium raimondii
GSVIVG01011569001 Vitis vinifera
GSVIVG01035252001 Vitis vinifera
HanXRQChr01g0015201 Helianthus annuus
HanXRQChr10g0279401 Helianthus annuus
HanXRQChr16g0527671 Helianthus annuus
HanXRQChr17g0566501 Helianthus annuus
Haze_10751 Corylus avellana
Haze_24816 Corylus avellana
Hma1.2p1_0068F.1_g037290 Hydrangea macrophylla
Hma1.2p1_0226F.1_g095560 Hydrangea macrophylla
HPP92_000350 Vanilla planifolia
HPP92_000417 Vanilla planifolia
HPP92_016178 Vanilla planifolia
HPP92_020220 Vanilla planifolia
HPP92_026737 Vanilla planifolia
Hund04323 Selenicereus undatus
Hund05564 Selenicereus undatus
Lalb_Chr01g0022271 Lupinus albus
Lalb_Chr07g0188021 Lupinus albus
Lalb_Chr07g0194281 Lupinus albus
Lalb_Chr12g0209261 Lupinus albus
Lalb_Chr12g0209961 Lupinus albus
Lalb_Chr13g0293021 Lupinus albus
Lalb_Chr19g0125701 Lupinus albus
Lj1g0007221 Lotus japonicus
Lj2A1128G42 Lonicera japonica
Lj3A858T45 Lonicera japonica
Lj3g0005113 Lotus japonicus
Lj4g0002501 Lotus japonicus
Lj6g0001325 Lotus japonicus
Lj6P728T10 Lonicera japonica
Lsat_1_v5_gn_4_22080 Lactuca sativa
Lsat_1_v5_gn_5_180561 Lactuca sativa
Lsat_1_v5_gn_5_35201 Lactuca sativa
Lsat_1_v5_gn_9_12441 Lactuca sativa
Manes.12G046200 Manihot esculenta
Manes.13G046800 Manihot esculenta
Manes.13G046900 Manihot esculenta
Manes.15G140200 Manihot esculenta
Manes.17G091300 Manihot esculenta
Mapoly0006s0267 Marchantia polymorpha
Mapoly0014s0143 Marchantia polymorpha
MBI07_g28644_MAGBIO Magnolia biondii
MBI11_g07427_MAGBIO Magnolia biondii
MBI13_g40625_MAGBIO Magnolia biondii
MBI13_g47388_MAGBIO Magnolia biondii
MBI19_g02927_MAGBIO Magnolia biondii
MD05G1173900 Malus domestica
MD10G1161800 Malus domestica
MD13G1013900 Malus domestica
MD16G1011100 Malus domestica
Medtr3g064750 Medicago truncatula
Medtr7g056400 Medicago truncatula
Medtr8g013095 Medicago truncatula
MELO3C005226.2 Cucumis melo
MELO3C024046.2 Cucumis melo
Migut.E00571 Erythranthe guttata
Migut.G00369 Erythranthe guttata
Migut.N00203 Erythranthe guttata
MSTRG.13651 Avicennia marina
MSTRG.2100 Avicennia marina
MSTRG.21867 Avicennia marina
MSTRG.24730 Avicennia marina
MSTRG.4050 Avicennia marina
MSTRG.9963 Avicennia marina
Nitab4.5_0000085g0290 Nicotiana tabacum
Nitab4.5_0001529g0010 Nicotiana tabacum
Nitab4.5_0001564g0080 Nicotiana tabacum
Nitab4.5_0002406g0020 Nicotiana tabacum
Nitab4.5_0003241g0040 Nicotiana tabacum
Nitab4.5_0012390g0020 Nicotiana tabacum
Nn1g02290 Nelumbo nucifera
Nn1g07918 Nelumbo nucifera
Nn3g18495 Nelumbo nucifera
Nn3g20001 Nelumbo nucifera
Nn4g24596 Nelumbo nucifera
Nn4g24636 Nelumbo nucifera
Nn8g40931 Nelumbo nucifera
Oeu024856.1 Olea europaea
Oeu042809.1 Olea europaea
Oeu042810.1 Olea europaea
Oeu044066.1 Olea europaea
Oeu053312.2 Olea europaea
Oeu058965.1 Olea europaea
Os01g0918100 Oryza sativa ssp. japonica
Os04g0376600 Oryza sativa ssp. japonica
Os09g0309900 Oryza sativa ssp. japonica
Os09g0401900 Oryza sativa ssp. japonica
Os09g0448500 Oryza sativa ssp. japonica
Peaxi162Scf00245g01013 Petunia axillaris
Peaxi162Scf00349g00216 Petunia axillaris
Peaxi162Scf00517g00628 Petunia axillaris
Peaxi162Scf00520g00078 Petunia axillaris
PGR083G1672 Punica granatum
PGR142G4244 Punica granatum
PGSC0003DMG400020162 Solanum tuberosum
PGSC0003DMG400032241 Solanum tuberosum
Phvul.001G227400 Phaseolus vulgaris
Phvul.002G185400 Phaseolus vulgaris
Phvul.003G170700 Phaseolus vulgaris
Phvul.008G128100 Phaseolus vulgaris
Phvul.008G239400 Phaseolus vulgaris
Phvul.010G020000 Phaseolus vulgaris
Potri.002G244000 Populus trichocarpa
Potri.008G140900 Populus trichocarpa
Potri.010G100700 Populus trichocarpa
Potri.014G190000 Populus trichocarpa
Pp3c20_12300 Physcomitrium patens
Pp3c20_1610 Physcomitrium patens
Pp3c23_10500 Physcomitrium patens
Pp3c23_1740 Physcomitrium patens
Pp3c23_18480 Physcomitrium patens
Pp3c24_14710 Physcomitrium patens
Pp3c24_7020 Physcomitrium patens
Pp3c8_22780 Physcomitrium patens
Prupe.1G339600 Prunus persica
Prupe.8G201300 Prunus persica
Psat0s4384g0080 Pisum sativum
Psat0s5292g0040 Pisum sativum
Psat3g147480 Pisum sativum
Psat5g142120 Pisum sativum
Psat6g137760 Pisum sativum
Psat7g085960 Pisum sativum
PSO063G7219 Papaver somniferum
PSO170G0299 Papaver somniferum
PSO357G0522 Papaver somniferum
PSO782G3794 Papaver somniferum
QL03p040635 Quercus lobata
QL05p058688 Quercus lobata
QL09p053183 Quercus lobata
RcHm_v2.0_Chr4g0445521 Rosa chinensis
RcHm_v2.0_Chr6g0284531 Rosa chinensis
Rhsim01G0255100 Rhododendron simsii
Rhsim09G0082700 Rhododendron simsii
Sabra02G0185700 Salix brachista
Sabra08G0106900 Salix brachista
Sabra10G0073200 Salix brachista
Sabra14G0142800 Salix brachista
SalBow2G0473 Salvia bowleyana
SalBow2G0509 Salvia bowleyana
SalBow2G2780 Salvia bowleyana
SalBow3G1406 Salvia bowleyana
Sc05g0002030 Simmondsia chinensis
Sc17g0001630 Simmondsia chinensis
Sc17g0002270 Simmondsia chinensis
Sc23g0005370 Simmondsia chinensis
Sc24g0000190 Simmondsia chinensis
Sc24g0003510 Simmondsia chinensis
Sed0000990 Sechium edule
Sed0004220 Sechium edule
Sed0010422 Sechium edule
Sed0021361 Sechium edule
SEGI_11099 Sequoiadendron giganteum
SEGI_18764 Sequoiadendron giganteum
SEGI_19876 Sequoiadendron giganteum
SEGI_20431 Sequoiadendron giganteum
SEGI_26299 Sequoiadendron giganteum
SEGI_27861 Sequoiadendron giganteum
SEGI_35626 Sequoiadendron giganteum
SGA_v2.0_scaffold165G38284 Striga asiatica
SGA_v2.0_scaffold348G49583 Striga asiatica
SGA_v2.0_scaffold79G25582 Striga asiatica
SHI35373 Sapria himalayana
SMO147G0107 Selaginella moellendorffii
SMO275G0022 Selaginella moellendorffii
SMO367G0329 Selaginella moellendorffii
Solyc01g005010.4 Solanum lycopersicum
Solyc06g083410.4 Solanum lycopersicum
Solyc09g082490.4 Solanum lycopersicum
Sopen01g001100 Solanum pennellii
Sopen06g034770 Solanum pennellii
Sopen09g031350 Solanum pennellii
Sp1g12990 Schrenkiella parvula
Sp2g13420 Schrenkiella parvula
Sp2g19130 Schrenkiella parvula
TAR374G0003 Trochodendron aralioides
TAR374G0520 Trochodendron aralioides
TAR622G0215 Trochodendron aralioides
TAR636G3032 Trochodendron aralioides
TAR687G0001 Trochodendron aralioides
THA.LOC104802669 Tarenaya hassleriana
THA.LOC104805107 Tarenaya hassleriana
THA.LOC104818962 Tarenaya hassleriana
THA.LOC104822499 Tarenaya hassleriana
THA.LOC104824112 Tarenaya hassleriana
Thecc.01G224000 Theobroma cacao
Thecc.02G300900 Theobroma cacao
Thhalv10004684m.g Eutrema salsugineum
Thhalv10004908m.g Eutrema salsugineum
Thhalv10008716m.g Eutrema salsugineum
TPR.G11955 Trifolium pratense
TPR.G14528 Trifolium pratense
TPR.G17145 Trifolium pratense
TPR.G26698 Trifolium pratense
TWI18G0281 Tripterygium wilfordii
TWI53G0580 Tripterygium wilfordii
TWI60G1308 Tripterygium wilfordii
TWI74G0156 Tripterygium wilfordii
TWI75G1556 Tripterygium wilfordii
TWI81G0623 Tripterygium wilfordii
unitig_748.g7299 Utricularia gibba
unitig_748.g8333 Utricularia gibba
vmacro10757 Vaccinium macrocarpon
vmacro14746 Vaccinium macrocarpon
VMungo0251G2986 Vigna mungo
VMungo0331G0848 Vigna mungo
VMungo0647G0269 Vigna mungo
VMungo1383G1870 Vigna mungo
VMungo1383G3594 Vigna mungo
Zm00001eb037710 Zea mays
Zm00001eb085950 Zea mays
Zm00001eb100680 Zea mays
Zm00001eb143390 Zea mays
Zm00001eb193320 Zea mays
Zm00001eb256450 Zea mays
Zm00001eb314530 Zea mays
Zm00001eb420720 Zea mays

User provided reference genes

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