Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p14730 Brassica napus
A02p03120 Brassica napus
A02p15730 Brassica napus
A02p33510 Brassica napus
A03p32830 Brassica napus
A06p43000 Brassica napus
A08p16160 Brassica napus
A09p24530 Brassica napus
A10p23350 Brassica napus
Aa31LG11G13980 Aethionema arabicum
Aa31LG2G7000 Aethionema arabicum
Aa31LG5G12710 Aethionema arabicum
Aa31LG6G6690 Aethionema arabicum
Aa31LG7G8700 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2225 Anthoceros agrestis
Actinidia18980 Actinidia chinensis
Ah.12g051840 Amaranthus hybridus
AL2G28320 Arabidopsis lyrata
AL3G11430 Arabidopsis lyrata
AL5G13470 Arabidopsis lyrata
AL6G26460 Arabidopsis lyrata
AL7G29960 Arabidopsis lyrata
Aqoxy3G03666 Aquilegia oxysepala
Aqoxy5G04094 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1LQ7FQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.29B9X6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3UD8ME Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7H823S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8EYB6E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CX750A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J0K3K7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NV23DS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W61CSA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YMN08X Arachis hypogaea
AT1G26355 Arabidopsis thaliana
AT1G69230 Arabidopsis thaliana
AT2G03680 Arabidopsis thaliana
AT3G02180 Arabidopsis thaliana
AT4G23496 Arabidopsis thaliana
AT5G15600 Arabidopsis thaliana
ATR0661G036 Amborella trichopoda
ATR0661G087 Amborella trichopoda
ATR0827G017 Amborella trichopoda
Atru.chr11.1614 Acer truncatum
Atru.chr12.558 Acer truncatum
Atru.chr8.506 Acer truncatum
Atru.chr9.2134 Acer truncatum
Atru.chr9.523 Acer truncatum
AUR62003088 Chenopodium quinoa
AUR62007905 Chenopodium quinoa
AUR62010731 Chenopodium quinoa
AUR62019740 Chenopodium quinoa
BcaB03g11763 Brassica carinata
BcaB07g30288 Brassica carinata
BcaB07g30660 Brassica carinata
BcaB08g36890 Brassica carinata
BcaC01g00816 Brassica carinata
BcaC01g04457 Brassica carinata
BcaC01g04474 Brassica carinata
BcaC01g04478 Brassica carinata
BcaC03g17229 Brassica carinata
BcaC03g18561 Brassica carinata
BcaC04g18947 Brassica carinata
BcaC04g21468 Brassica carinata
BcaC06g31163 Brassica carinata
BcaC06g31173 Brassica carinata
BcaC09g47685 Brassica carinata
BcaC09g50991 Brassica carinata
BcaNung01051 Brassica carinata
BcaNung06752 Brassica carinata
BNapus_Darmor_BZH_scaffold_113p00170 Brassica napus
BolC1t01749H Brassica oleracea
BolC1t05919H Brassica oleracea
BolC2t06710H Brassica oleracea
BolC2t08684H Brassica oleracea
BolC2t11248H Brassica oleracea
BolC3t16260H Brassica oleracea
BolC3t20756H Brassica oleracea
BolC7t43917H Brassica oleracea
BolC9t56004H Brassica oleracea
BolC9t58988H Brassica oleracea
BraA01t01412Z Brassica rapa
BraA01t04630Z Brassica rapa
BraA02t05282Z Brassica rapa
BraA02t06634Z Brassica rapa
BraA08t33586Z Brassica rapa
BraA09t38047Z Brassica rapa
BraA10t44403Z Brassica rapa
C01p18230 Brassica napus
C02p07840 Brassica napus
C02p26180 Brassica napus
C02p51630 Brassica napus
C03p84690 Brassica napus
C07p34030 Brassica napus
C09p31440 Brassica napus
C09p61490 Brassica napus
CAN.G1228.12 Capsicum annuum
CAN.G1377.7 Capsicum annuum
CAN.G183.27 Capsicum annuum
CAN.G40.13 Capsicum annuum
CAN.G497.94 Capsicum annuum
CAN.G532.21 Capsicum annuum
CAN.G707.12 Capsicum annuum
CAN.G713.32 Capsicum annuum
CANSAT64G0502 Cannabis sativa
CANSAT64G2561 Cannabis sativa
CARHR062110 Cardamine hirsuta
CARHR076150 Cardamine hirsuta
CARHR146020 Cardamine hirsuta
CARHR197720 Cardamine hirsuta
CARHR230830 Cardamine hirsuta
Carub.0002s1582 Capsella rubella
Carub.0003s0130 Capsella rubella
Carub.0005s0282 Capsella rubella
Carub.0006s1376 Capsella rubella
Carub.0007s1769 Capsella rubella
Ca_04309_v3 Cicer arietinum L.
Ca_04984_v3 Cicer arietinum L.
CBR_g30321 Chara braunii
Cc00_g03400 Coffea canephora
Cc07_g04350 Coffea canephora
Cc08_g15130 Coffea canephora
CDE07G0858 Ceratophyllum demersum
CDE10G0200 Ceratophyllum demersum
CDE10G0978 Ceratophyllum demersum
CDE10G1178 Ceratophyllum demersum
Cfa007318 Carpinus fangiana
Cfa012189 Carpinus fangiana
Ciclev10006293m.g Citrus clementina
Ciclev10022881m.g Citrus clementina
Ciclev10023365m.g Citrus clementina
Ciclev10033140m.g Citrus clementina
CiPaw.03G087600 Carya illinoinensis
CiPaw.04G054300 Carya illinoinensis
CiPaw.05G124300 Carya illinoinensis
CiPaw.11G131100 Carya illinoinensis
CiPaw.12G090200 Carya illinoinensis
ClCG07G008200 Citrullus lanatus
ClCG08G010450 Citrullus lanatus
ClCG11G004840 Citrullus lanatus
COL.COLO4_08376 Corchorus olitorius
COL.COLO4_24320 Corchorus olitorius
COL.COLO4_27865 Corchorus olitorius
COL.COLO4_37971 Corchorus olitorius
Cpa.g.sc1.138 Carica papaya
Cpa.g.sc14.195 Carica papaya
Cpa.g.sc180.27 Carica papaya
Cpa.g.sc285.4 Carica papaya
Cpa.g.sc94.73 Carica papaya
Cre14.g613134 Chlamydomonas reinhardtii
CsaV3_4G005890 Cucumis sativus L.
CsaV3_6G033710 Cucumis sativus L.
CSS0005737 Camellia sinensis var. sinensis
CSS0015605 Camellia sinensis var. sinensis
CSS0034679 Camellia sinensis var. sinensis
CSS0036076 Camellia sinensis var. sinensis
DCAR_007199 Daucus carota
DCAR_024126 Daucus carota
DCAR_025441 Daucus carota
DCAR_026679 Daucus carota
Dinv17432 Davidia involucrata
Dinv22766 Davidia involucrata
Dinv28387 Davidia involucrata
Dinv37607 Davidia involucrata
Dinv38908 Davidia involucrata
Duzib068G0106 Durio zibethinus
Duzib068G0152 Durio zibethinus
Duzib084G0684 Durio zibethinus
Duzib147G0005 Durio zibethinus
Duzib205G1298 Durio zibethinus
Duzib248G1465 Durio zibethinus
Duzib251G0243 Durio zibethinus
ECA232G1206 Erigeron canadensis
ECA232G1462 Erigeron canadensis
ECA240G3571 Erigeron canadensis
ECA246G3266 Erigeron canadensis
EL10Ac5g12822 Beta vulgaris
EL10Ac6g15012 Beta vulgaris
Eucgr.B00615 Eucalyptus grandis
Eucgr.B03146 Eucalyptus grandis
Eucgr.D01822 Eucalyptus grandis
Eucgr.J01387 Eucalyptus grandis
FAN04G1683 Fragaria x ananassa
FAN05G5300 Fragaria x ananassa
FAN08G1705 Fragaria x ananassa
FAN08G1795 Fragaria x ananassa
FAN09G0624 Fragaria x ananassa
FAN12G3040 Fragaria x ananassa
FAN13G2819 Fragaria x ananassa
FAN13G2963 Fragaria x ananassa
FAN14G1055 Fragaria x ananassa
FAN18G1802 Fragaria x ananassa
FAN18G3701 Fragaria x ananassa
FAN22G2227 Fragaria x ananassa
FvH4_4g29840 Fragaria vesca
FvH4_5g03030 Fragaria vesca
FvH4_5g13660 Fragaria vesca
FvH4_6g46690 Fragaria vesca
Glyma.01G060900 Glycine max
Glyma.01G221900 Glycine max
Glyma.02G119200 Glycine max
Glyma.05G210800 Glycine max
Glyma.08G017200 Glycine max
Glyma.11G021900 Glycine max
Glyma.13G055400 Glycine max
Glyma.19G032000 Glycine max
Gohir.A03G070800 Gossypium hirsutum
Gohir.A03G104600 Gossypium hirsutum
Gohir.A07G067600 Gossypium hirsutum
Gohir.A08G115200 Gossypium hirsutum
Gohir.A12G234000 Gossypium hirsutum
Gohir.A13G083100 Gossypium hirsutum
Gohir.D02G129800 Gossypium hirsutum
Gohir.D03G097200 Gossypium hirsutum
Gohir.D07G072200 Gossypium hirsutum
Gohir.D08G135800 Gossypium hirsutum
Gohir.D12G233300 Gossypium hirsutum
Gohir.D13G083000 Gossypium hirsutum
Gorai.001G076400 Gossypium raimondii
Gorai.003G102000 Gossypium raimondii
Gorai.004G139000 Gossypium raimondii
Gorai.005G145800 Gossypium raimondii
Gorai.008G249700 Gossypium raimondii
Gorai.013G094900 Gossypium raimondii
GSVIVG01000553001 Vitis vinifera
GSVIVG01008116001 Vitis vinifera
GSVIVG01012230001 Vitis vinifera
GSVIVG01019404001 Vitis vinifera
GSVIVG01032901001 Vitis vinifera
GSVIVG01038688001 Vitis vinifera
HanXRQChr02g0059871 Helianthus annuus
HanXRQChr03g0085951 Helianthus annuus
HanXRQChr09g0269621 Helianthus annuus
HanXRQChr09g0270381 Helianthus annuus
HanXRQChr12g0376251 Helianthus annuus
HanXRQChr13g0416061 Helianthus annuus
Haze_08829 Corylus avellana
Haze_11895 Corylus avellana
Haze_14416 Corylus avellana
Hma1.2p1_0216F.1_g090950 Hydrangea macrophylla
Hma1.2p1_0216F.1_g090970 Hydrangea macrophylla
Hma1.2p1_0322F.1_g124610 Hydrangea macrophylla
Hma1.2p1_0481F.1_g162360 Hydrangea macrophylla
Hma1.2p1_1555F.1_g290401 Hydrangea macrophylla
HPP92_006047 Vanilla planifolia
Hund05833 Selenicereus undatus
Hund09934 Selenicereus undatus
Hund11442 Selenicereus undatus
Hund25169 Selenicereus undatus
Hund25170 Selenicereus undatus
Hund26040 Selenicereus undatus
Lalb_Chr04g0255611 Lupinus albus
Lalb_Chr06g0174921 Lupinus albus
Lalb_Chr17g0341261 Lupinus albus
Lj2g0003657 Lotus japonicus
Lj2g0027667 Lotus japonicus
Lj4A120T26 Lonicera japonica
LjContig00312_ERROPOS870357g0001511 Lotus japonicus
Lsat_1_v5_gn_3_53761 Lactuca sativa
Lsat_1_v5_gn_4_110720 Lactuca sativa
Lsat_1_v5_gn_4_172200 Lactuca sativa
Lsat_1_v5_gn_5_22961 Lactuca sativa
Lsat_1_v5_gn_5_23001 Lactuca sativa
Lsat_1_v5_gn_6_85021 Lactuca sativa
Manes.01G026900 Manihot esculenta
Manes.01G058200 Manihot esculenta
Manes.01G094600 Manihot esculenta
Manes.02G018200 Manihot esculenta
Manes.02G056400 Manihot esculenta
Manes.05G109500 Manihot esculenta
Manes.06G082900 Manihot esculenta
Manes.06G152300 Manihot esculenta
Manes.14G086900 Manihot esculenta
Mapoly0011s0101 Marchantia polymorpha
Mapoly0152s0006 Marchantia polymorpha
MBI11_g37071_MAGBIO Magnolia biondii
MBI15_g45520_MAGBIO Magnolia biondii
MBI16_g10847_MAGBIO Magnolia biondii
MBI19_g21276_MAGBIO Magnolia biondii
MCO02G170 Micromonas commoda
MCO03G548 Micromonas commoda
MD06G1089300 Malus domestica
MD06G1158500 Malus domestica
MD06G1203200 Malus domestica
MD09G1068700 Malus domestica
MD13G1060700 Malus domestica
MD13G1061400 Malus domestica
MD14G1110000 Malus domestica
MD14G1213800 Malus domestica
MD16G1059900 Malus domestica
MD17G1061700 Malus domestica
Medtr5g045310 Medicago truncatula
Medtr6g015390 Medicago truncatula
MELO3C011417.2 Cucumis melo
MELO3C016359.2 Cucumis melo
Migut.A00752 Erythranthe guttata
Migut.D01627 Erythranthe guttata
Migut.E00046 Erythranthe guttata
Migut.K00811 Erythranthe guttata
Migut.L01180 Erythranthe guttata
MSTRG.11334 Avicennia marina
MSTRG.13452 Avicennia marina
MSTRG.13857 Avicennia marina
MSTRG.1847 Avicennia marina
MSTRG.4487 Avicennia marina
MSTRG.7739 Avicennia marina
Nitab4.5_0000231g0110 Nicotiana tabacum
Nitab4.5_0001118g0010 Nicotiana tabacum
Nitab4.5_0001485g0070 Nicotiana tabacum
Nitab4.5_0005596g0030 Nicotiana tabacum
Nitab4.5_0007061g0060 Nicotiana tabacum
Nitab4.5_0007160g0060 Nicotiana tabacum
Nitab4.5_0008776g0020 Nicotiana tabacum
Nitab4.5_0009044g0030 Nicotiana tabacum
Nn1g01634 Nelumbo nucifera
Nn3g17479 Nelumbo nucifera
Nn4g23461 Nelumbo nucifera
Oeu014421.1 Olea europaea
Oeu031425.1 Olea europaea
Oeu033401.1 Olea europaea
Oeu048136.1 Olea europaea
Oeu049857.1 Olea europaea
Oeu051025.1 Olea europaea
Oeu052965.1 Olea europaea
Os03g0417800 Oryza sativa ssp. japonica
Os04g0578300 Oryza sativa ssp. japonica
Os11g0629400 Oryza sativa ssp. japonica
Os12g0502000 Oryza sativa ssp. japonica
Peaxi162Scf00026g01610 Petunia axillaris
Peaxi162Scf00074g01825 Petunia axillaris
Peaxi162Scf00166g00332 Petunia axillaris
Peaxi162Scf00175g00418 Petunia axillaris
Peaxi162Scf00201g00332 Petunia axillaris
PGR031G1080 Punica granatum
PGR083G0489 Punica granatum
PGR083G1618 Punica granatum
PGR102G0948 Punica granatum
PGSC0003DMG400001364 Solanum tuberosum
PGSC0003DMG400012325 Solanum tuberosum
PGSC0003DMG400021891 Solanum tuberosum
PGSC0003DMG400024631 Solanum tuberosum
PGSC0003DMG400028366 Solanum tuberosum
Phvul.002G159400 Phaseolus vulgaris
Phvul.002G292200 Phaseolus vulgaris
Phvul.003G041500 Phaseolus vulgaris
Phvul.004G038000 Phaseolus vulgaris
Potri.001G100100 Populus trichocarpa
Potri.003G131600 Populus trichocarpa
Potri.008G097000 Populus trichocarpa
Potri.010G157600 Populus trichocarpa
Potri.015G059100 Populus trichocarpa
Potri.017G095200 Populus trichocarpa
Pp3c15_1640 Physcomitrium patens
Pp3c18_18290 Physcomitrium patens
Pp3c18_18370 Physcomitrium patens
Pp3c19_4053 Physcomitrium patens
Pp3c19_4100 Physcomitrium patens
Pp3c19_4103 Physcomitrium patens
Pp3c22_7610 Physcomitrium patens
Pp3c24_9610 Physcomitrium patens
PRCOL_00002664 Prasinoderma coloniale
PRCOL_00006912 Prasinoderma coloniale
Prupe.1G288700 Prunus persica
Prupe.3G252100 Prunus persica
Prupe.5G105200 Prunus persica
Prupe.5G105300 Prunus persica
Prupe.5G206800 Prunus persica
Psat1g067240 Pisum sativum
Psat2g131160 Pisum sativum
PSO017G3816 Papaver somniferum
PSO017G7332 Papaver somniferum
PSO478G0888 Papaver somniferum
PSO478G1062 Papaver somniferum
QL02p067333 Quercus lobata
QL02p067344 Quercus lobata
QL03p073924 Quercus lobata
QL10p019943 Quercus lobata
QL12p032007 Quercus lobata
QL93p0053_1022 Quercus lobata
RcHm_v2.0_Chr2g0165561 Rosa chinensis
RcHm_v2.0_Chr4g0438091 Rosa chinensis
RcHm_v2.0_Chr7g0183301 Rosa chinensis
RcHm_v2.0_Chr7g0196801 Rosa chinensis
Rhsim02G0234800 Rhododendron simsii
Rhsim08G0075700 Rhododendron simsii
Rhsim09G0126400 Rhododendron simsii
Rhsim12G0074400 Rhododendron simsii
Sabra01G0075100 Salix brachista
Sabra03G0094000 Salix brachista
Sabra10G0119500 Salix brachista
Sabra15G0084800 Salix brachista
Sabra17G0084400 Salix brachista
SabraUnG0002000 Salix brachista
SalBow2G2777 Salvia bowleyana
SalBow4G1455 Salvia bowleyana
SalBow4G1468 Salvia bowleyana
SalBow4G1960 Salvia bowleyana
SalBow4G1992 Salvia bowleyana
SalBow4G2006 Salvia bowleyana
SalBow4G3239 Salvia bowleyana
SalBow8G1442 Salvia bowleyana
Sc01g0009760 Simmondsia chinensis
Sc04g0004470 Simmondsia chinensis
Sc14g0007950 Simmondsia chinensis
Sed0004853 Sechium edule
Sed0008731 Sechium edule
Sed0021281 Sechium edule
Sed0027806 Sechium edule
SEGI_02036 Sequoiadendron giganteum
SEGI_05303 Sequoiadendron giganteum
SEGI_25309 Sequoiadendron giganteum
SEGI_27918 Sequoiadendron giganteum
SEGI_29924 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31480 Striga asiatica
SGA_v2.0_scaffold16G07802 Striga asiatica
SGA_v2.0_scaffold236G43775 Striga asiatica
SGA_v2.0_scaffold25G10946 Striga asiatica
SHI15733 Sapria himalayana
SMO144G0198 Selaginella moellendorffii
SMO170G0026 Selaginella moellendorffii
Solyc01g010270.3 Solanum lycopersicum
Solyc02g089065.1 Solanum lycopersicum
Solyc03g114970.3 Solanum lycopersicum
Solyc05g012160.3 Solanum lycopersicum
Solyc08g081470.3 Solanum lycopersicum
Sopen01g005890 Solanum pennellii
Sopen02g033820 Solanum pennellii
Sopen03g034050 Solanum pennellii
Sopen05g006950 Solanum pennellii
Sopen08g029800 Solanum pennellii
Sp1g22340 Schrenkiella parvula
Sp2g14500 Schrenkiella parvula
Sp3g01260 Schrenkiella parvula
Sp5g24280 Schrenkiella parvula
Sp6g28500 Schrenkiella parvula
Sp7g21390 Schrenkiella parvula
TAR375G1106 Trochodendron aralioides
TAR622G0843 Trochodendron aralioides
TAR629G1017 Trochodendron aralioides
THA.LOC104801825 Tarenaya hassleriana
THA.LOC104802978 Tarenaya hassleriana
THA.LOC104806421 Tarenaya hassleriana
THA.LOC104808527 Tarenaya hassleriana
THA.LOC104814684 Tarenaya hassleriana
THA.LOC104820990 Tarenaya hassleriana
THA.LOC104822004 Tarenaya hassleriana
THA.LOC104824055 Tarenaya hassleriana
Thecc.02G328900 Theobroma cacao
Thecc.03G104400 Theobroma cacao
Thecc.03G184200 Theobroma cacao
Thecc.03G285000 Theobroma cacao
Thecc.04G097800 Theobroma cacao
Thhalv10005140m.g Eutrema salsugineum
Thhalv10015075m.g Eutrema salsugineum
Thhalv10019332m.g Eutrema salsugineum
Thhalv10021779m.g Eutrema salsugineum
Thhalv10027042m.g Eutrema salsugineum
TPR.G24467 Trifolium pratense
TPR.G588 Trifolium pratense
TWI15G0013 Tripterygium wilfordii
TWI31G0776 Tripterygium wilfordii
TWI31G1178 Tripterygium wilfordii
TWI32G1136 Tripterygium wilfordii
TWI34G0200 Tripterygium wilfordii
TWI75G0290 Tripterygium wilfordii
TWI79G1077 Tripterygium wilfordii
unitig_26.g10285 Utricularia gibba
unitig_749.g13210 Utricularia gibba
unitig_899.g15486 Utricularia gibba
vmacro10432 Vaccinium macrocarpon
vmacro11401 Vaccinium macrocarpon
vmacro18141 Vaccinium macrocarpon
vmacro20930 Vaccinium macrocarpon
VMungo0464G1722 Vigna mungo
VMungo1309G2200 Vigna mungo
Zm00001eb020110 Zea mays
Zm00001eb073260 Zea mays
Zm00001eb131400 Zea mays
Zm00001eb166450 Zea mays
Zm00001eb393120 Zea mays
Zm00001eb409450 Zea mays

User provided reference genes

Program Settings