Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p02980 Brassica napus
A03p02990 Brassica napus
A03p03020 Brassica napus
A05p37160 Brassica napus
A05p37170 Brassica napus
A05p37180 Brassica napus
A05p37190 Brassica napus
A10p29460 Brassica napus
A10p29470 Brassica napus
A10p29480 Brassica napus
A10p29490 Brassica napus
A10p29500 Brassica napus
Aa31LG11G7730 Aethionema arabicum
Aa31LG3G6350 Aethionema arabicum
Actinidia39875 Actinidia chinensis
Ah.04g152160 Amaranthus hybridus
Ah.04g152180 Amaranthus hybridus
Ah.04g152190 Amaranthus hybridus
Ah.04g152210 Amaranthus hybridus
Ah.04g152220 Amaranthus hybridus
Ah.04g152230 Amaranthus hybridus
Ah.04g162780 Amaranthus hybridus
Ah.13g076120 Amaranthus hybridus
AL3G23810 Arabidopsis lyrata
AL3G23820 Arabidopsis lyrata
AL6G16980 Arabidopsis lyrata
AL6G17000 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.0WT4Y2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.291MZ5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.81VLYB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9X1AFC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ENB4BT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G4Y2Y5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IATE2P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JK6VL5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L0RB90 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L5HZ8F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U8XEFG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UI4LUT Arachis hypogaea
AT3G12145 Arabidopsis thaliana
AT5G06860 Arabidopsis thaliana
AT5G06870 Arabidopsis thaliana
ATR0605G049 Amborella trichopoda
ATR0605G105 Amborella trichopoda
ATR0605G238 Amborella trichopoda
AUR62000026 Chenopodium quinoa
AUR62012077 Chenopodium quinoa
AUR62012078 Chenopodium quinoa
AUR62019197 Chenopodium quinoa
AUR62019219 Chenopodium quinoa
AUR62024339 Chenopodium quinoa
AUR62024340 Chenopodium quinoa
AUR62024341 Chenopodium quinoa
AUR62024342 Chenopodium quinoa
AUR62024344 Chenopodium quinoa
AUR62024345 Chenopodium quinoa
AUR62024346 Chenopodium quinoa
AUR62024347 Chenopodium quinoa
AUR62024350 Chenopodium quinoa
AUR62024352 Chenopodium quinoa
AUR62024353 Chenopodium quinoa
AUR62024354 Chenopodium quinoa
AUR62024355 Chenopodium quinoa
AUR62024807 Chenopodium quinoa
AUR62025948 Chenopodium quinoa
AUR62025949 Chenopodium quinoa
AUR62025950 Chenopodium quinoa
AUR62025951 Chenopodium quinoa
AUR62025954 Chenopodium quinoa
AUR62025955 Chenopodium quinoa
AUR62025957 Chenopodium quinoa
AUR62030057 Chenopodium quinoa
BcaB01g05707 Brassica carinata
BcaB01g06010 Brassica carinata
BcaB01g06016 Brassica carinata
BcaB01g06017 Brassica carinata
BcaB04g21093 Brassica carinata
BcaB05g21642 Brassica carinata
BcaC03g13950 Brassica carinata
BcaC05g29278 Brassica carinata
BcaC05g29280 Brassica carinata
BcaC05g29281 Brassica carinata
BcaC05g29282 Brassica carinata
BcaC05g29284 Brassica carinata
BcaC06g32403 Brassica carinata
BcaC06g32404 Brassica carinata
BcaC06g32405 Brassica carinata
BcaC06g32406 Brassica carinata
BcaC06g32533 Brassica carinata
BcaC06g32534 Brassica carinata
BcaC06g32535 Brassica carinata
BcaC09g48218 Brassica carinata
BolC1t05260H Brassica oleracea
BolC2t06252H Brassica oleracea
BolC2t07234H Brassica oleracea
BolC3t12880H Brassica oleracea
BolC3t12881H Brassica oleracea
BolC5t34228H Brassica oleracea
BolC5t34229H Brassica oleracea
BolC5t34230H Brassica oleracea
BolC5t34232H Brassica oleracea
BolC9t59728H Brassica oleracea
BolC9t59729H Brassica oleracea
BolC9t59730H Brassica oleracea
BolC9t59731H Brassica oleracea
BraA02t04896Z Brassica rapa
BraA03t09657Z Brassica rapa
BraA03t09658Z Brassica rapa
BraA03t09659Z Brassica rapa
BraA03t09660Z Brassica rapa
BraA05t22514Z Brassica rapa
BraA05t22515Z Brassica rapa
BraA05t22516Z Brassica rapa
BraA10t44990Z Brassica rapa
BraA10t44991Z Brassica rapa
BraA10t44992Z Brassica rapa
BraA10t44993Z Brassica rapa
BraA10t44994Z Brassica rapa
C01p53140 Brassica napus
C02p02880 Brassica napus
C03p03390 Brassica napus
C03p03400 Brassica napus
C05p55590 Brassica napus
C05p55600 Brassica napus
C05p55610 Brassica napus
C05p55630 Brassica napus
C09p69840 Brassica napus
C09p69850 Brassica napus
C09p69860 Brassica napus
C09p69870 Brassica napus
CAN.G1424.8 Capsicum annuum
CAN.G206.138 Capsicum annuum
CAN.G608.14 Capsicum annuum
CAN.G65.144 Capsicum annuum
CANSAT64G0555 Cannabis sativa
CANSAT64G0604 Cannabis sativa
CANSAT64G0730 Cannabis sativa
CANSAT64G1672 Cannabis sativa
CANSAT64G1993 Cannabis sativa
CANSAT64G2309 Cannabis sativa
CANSAT64G2511 Cannabis sativa
CANSAT64G2554 Cannabis sativa
CARHR086720 Cardamine hirsuta
CARHR206270 Cardamine hirsuta
CARHR206280 Cardamine hirsuta
CARHR206290 Cardamine hirsuta
CARHR206300 Cardamine hirsuta
CARHR206310 Cardamine hirsuta
Carub.0003s1150 Capsella rubella
Carub.0003s1151 Capsella rubella
Carub.0006s0575 Capsella rubella
Carub.0006s0577 Capsella rubella
Carub.0006s0579 Capsella rubella
Carub.0006s0580 Capsella rubella
Ca_08499_v3 Cicer arietinum L.
Ca_08500_v3 Cicer arietinum L.
Ca_13250_v3 Cicer arietinum L.
Ca_18307_v3 Cicer arietinum L.
Ca_18308_v3 Cicer arietinum L.
Cc06_g16270 Coffea canephora
Cc06_g16280 Coffea canephora
Cc06_g16290 Coffea canephora
Cc06_g16300 Coffea canephora
CDE07G1181 Ceratophyllum demersum
Cfa016889 Carpinus fangiana
Ciclev10032086m.g Citrus clementina
CiPaw.10G028600 Carya illinoinensis
ClCG04G000300 Citrullus lanatus
ClCG04G000320 Citrullus lanatus
COL.COLO4_36120 Corchorus olitorius
Cpa.g.sc16.41 Carica papaya
Cpa.g.sc85.96 Carica papaya
CsaV3_4G005640 Cucumis sativus L.
CsaV3_4G010610 Cucumis sativus L.
CSS0004886 Camellia sinensis var. sinensis
CSS0006553 Camellia sinensis var. sinensis
CSS0025282 Camellia sinensis var. sinensis
CSS0025407 Camellia sinensis var. sinensis
CSS0029233 Camellia sinensis var. sinensis
DCAR_013562 Daucus carota
DCAR_013563 Daucus carota
DCAR_017029 Daucus carota
DCAR_017030 Daucus carota
DCAR_029627 Daucus carota
Dinv24097 Davidia involucrata
Duzib106G1437 Durio zibethinus
ECA236G3995 Erigeron canadensis
EL10Ac3g06960 Beta vulgaris
EL10Ac3g06961 Beta vulgaris
EL10Ac3g06964 Beta vulgaris
EL10Ac3g06966 Beta vulgaris
EL10Ac3g06968 Beta vulgaris
EL10Ac3g06970 Beta vulgaris
EL10Ac3g06973 Beta vulgaris
EL10Ac4g07807 Beta vulgaris
EL10Ac4g07808 Beta vulgaris
EL10Ac4g07809 Beta vulgaris
EL10Ac4g09891 Beta vulgaris
EL10Ac9g20955 Beta vulgaris
Eucgr.A02426 Eucalyptus grandis
Eucgr.A02430 Eucalyptus grandis
Eucgr.A02432 Eucalyptus grandis
Eucgr.A02433 Eucalyptus grandis
Eucgr.L03719 Eucalyptus grandis
FAN02G2473 Fragaria x ananassa
FAN02G4408 Fragaria x ananassa
FAN05G4501 Fragaria x ananassa
FAN14G1472 Fragaria x ananassa
FAN14G2294 Fragaria x ananassa
FvH4_6g22790 Fragaria vesca
FvH4_6g22810 Fragaria vesca
Glyma.05G123700 Glycine max
Glyma.05G123900 Glycine max
Glyma.05G124000 Glycine max
Glyma.08G078800 Glycine max
Glyma.08G078900 Glycine max
Glyma.08G079100 Glycine max
Glyma.08G079200 Glycine max
Glyma.15G209200 Glycine max
Glyma.15G209300 Glycine max
Glyma.19G145200 Glycine max
Gohir.A09G126200 Gossypium hirsutum
Gorai.006G140800 Gossypium raimondii
GSVIVG01032044001 Vitis vinifera
GSVIVG01033370001 Vitis vinifera
HanXRQChr01g0018621 Helianthus annuus
HanXRQChr05g0132801 Helianthus annuus
HanXRQChr10g0291371 Helianthus annuus
HanXRQChr10g0298271 Helianthus annuus
Haze_19943 Corylus avellana
Hma1.2p1_0812F.1_g222210 Hydrangea macrophylla
Hma1.2p1_1575F.1_g291570 Hydrangea macrophylla
Hma1.2p1_1575F.1_g291590 Hydrangea macrophylla
Hma1.2p1_1575F.1_g291600 Hydrangea macrophylla
Hma1.2p1_1575F.1_g291610 Hydrangea macrophylla
Hma1.2p1_1745F.1_g300270 Hydrangea macrophylla
HPP92_007467 Vanilla planifolia
HPP92_015471 Vanilla planifolia
HPP92_015672 Vanilla planifolia
HPP92_015762 Vanilla planifolia
Hund09541 Selenicereus undatus
Hund19181 Selenicereus undatus
Hund19182 Selenicereus undatus
Hund19183 Selenicereus undatus
Hund19184 Selenicereus undatus
Hund24754 Selenicereus undatus
Hund24762 Selenicereus undatus
Hund24763 Selenicereus undatus
Hund24765 Selenicereus undatus
Hund24769 Selenicereus undatus
Hund24770 Selenicereus undatus
Hund24771 Selenicereus undatus
Hund24772 Selenicereus undatus
Hund24776 Selenicereus undatus
Hund24778 Selenicereus undatus
Hund24801 Selenicereus undatus
Hund24803 Selenicereus undatus
Lalb_Chr01g0010751 Lupinus albus
Lalb_Chr03g0036591 Lupinus albus
Lalb_Chr07g0189131 Lupinus albus
Lalb_Chr18g0047631 Lupinus albus
Lj1g0017845 Lotus japonicus
Lj1g0020283 Lotus japonicus
Lj1g0027066 Lotus japonicus
Lj1g0027856 Lotus japonicus
Lj2A373T41 Lonicera japonica
Lj2C127T8 Lonicera japonica
Lj4g0004655 Lotus japonicus
Lj4g0005105 Lotus japonicus
Lj4g0010742 Lotus japonicus
Lj9A628T61 Lonicera japonica
Lsat_1_v5_gn_1_71580 Lactuca sativa
Lsat_1_v5_gn_4_140521 Lactuca sativa
Lsat_1_v5_gn_8_79221 Lactuca sativa
Lsat_1_v5_gn_9_28061 Lactuca sativa
Lsat_1_v5_gn_9_28081 Lactuca sativa
Manes.09G031400 Manihot esculenta
Manes.09G031500 Manihot esculenta
MBI01_g15745_MAGBIO Magnolia biondii
MBI04_g14270_MAGBIO Magnolia biondii
MD14G1062500 Malus domestica
MD14G1062600 Malus domestica
Medtr1g047950 Medicago truncatula
Medtr1g047960 Medicago truncatula
Medtr2g461310 Medicago truncatula
Medtr3g437820 Medicago truncatula
Medtr4g094310 Medicago truncatula
Medtr4g094435 Medicago truncatula
Medtr4g094440 Medicago truncatula
Medtr4g094450 Medicago truncatula
Medtr7g006870 Medicago truncatula
Medtr7g023590 Medicago truncatula
Medtr7g023630 Medicago truncatula
Medtr7g023670 Medicago truncatula
Medtr7g023690 Medicago truncatula
Medtr7g023730 Medicago truncatula
Medtr7g023740 Medicago truncatula
Medtr7g033445 Medicago truncatula
Medtr7g033475 Medicago truncatula
Medtr7g092730 Medicago truncatula
Medtr7g092740 Medicago truncatula
Medtr8g466220 Medicago truncatula
MELO3C016384.2 Cucumis melo
MELO3C023163.2 Cucumis melo
Migut.B01340 Erythranthe guttata
Migut.C00412 Erythranthe guttata
Migut.I00482 Erythranthe guttata
Migut.I00483 Erythranthe guttata
Migut.I00484 Erythranthe guttata
Migut.I00485 Erythranthe guttata
Migut.J01808 Erythranthe guttata
Migut.J01809 Erythranthe guttata
Migut.J01810 Erythranthe guttata
Migut.J01811 Erythranthe guttata
Migut.J01812 Erythranthe guttata
Migut.J01813 Erythranthe guttata
Migut.J01814 Erythranthe guttata
Migut.K00056 Erythranthe guttata
Migut.N00245 Erythranthe guttata
MSTRG.4103 Avicennia marina
Nitab4.5_0000016g0160 Nicotiana tabacum
Nitab4.5_0000016g0170 Nicotiana tabacum
Nitab4.5_0000016g0180 Nicotiana tabacum
Nitab4.5_0000871g0030 Nicotiana tabacum
Nitab4.5_0002703g0050 Nicotiana tabacum
Nitab4.5_0005395g0010 Nicotiana tabacum
Nitab4.5_0005438g0010 Nicotiana tabacum
Nn1g08133 Nelumbo nucifera
Nn2g14499 Nelumbo nucifera
Nn2g15538 Nelumbo nucifera
Nn2g15540 Nelumbo nucifera
Nn2g15541 Nelumbo nucifera
Nn2g15542 Nelumbo nucifera
Nn2g15543 Nelumbo nucifera
Nn2g15544 Nelumbo nucifera
Nn2g15545 Nelumbo nucifera
Nn2g15546 Nelumbo nucifera
Nn2g15547 Nelumbo nucifera
Nn2g15548 Nelumbo nucifera
Nn2g15549 Nelumbo nucifera
Nn2g15551 Nelumbo nucifera
Nn2g15552 Nelumbo nucifera
Nn2g15553 Nelumbo nucifera
Nn2g15554 Nelumbo nucifera
Nn2g15555 Nelumbo nucifera
Nn2g15556 Nelumbo nucifera
Nn2g15557 Nelumbo nucifera
Nn2g15558 Nelumbo nucifera
Nn2g15559 Nelumbo nucifera
Nn2g15561 Nelumbo nucifera
Nn2g15562 Nelumbo nucifera
Nn2g15565 Nelumbo nucifera
Nn2g15567 Nelumbo nucifera
Nn2g15568 Nelumbo nucifera
Nn2g15569 Nelumbo nucifera
Nn2g15623 Nelumbo nucifera
Nn3g17689 Nelumbo nucifera
Nn4g23944 Nelumbo nucifera
Nn4g25951 Nelumbo nucifera
Nn6g31633 Nelumbo nucifera
Nn7g36069 Nelumbo nucifera
Nn7g36070 Nelumbo nucifera
Nn7g36071 Nelumbo nucifera
Nn7g36072 Nelumbo nucifera
Nn7g36073 Nelumbo nucifera
Nn7g37588 Nelumbo nucifera
Nn7g37946 Nelumbo nucifera
Nn7g37947 Nelumbo nucifera
Nn7g37948 Nelumbo nucifera
Nn7g37949 Nelumbo nucifera
Nn8g40636 Nelumbo nucifera
Oeu029218.1 Olea europaea
Oeu029219.1 Olea europaea
Oeu039099.1 Olea europaea
Os03g0436600 Oryza sativa ssp. japonica
Os05g0104150 Oryza sativa ssp. japonica
Os05g0104200 Oryza sativa ssp. japonica
Os05g0104600 Oryza sativa ssp. japonica
Os05g0104700 Oryza sativa ssp. japonica
Os07g0568700 Oryza sativa ssp. japonica
Os08g0510101 Oryza sativa ssp. japonica
Os09g0491612 Oryza sativa ssp. japonica
Peaxi162Scf00285g00046 Petunia axillaris
Peaxi162Scf00285g00047 Petunia axillaris
Peaxi162Scf00285g00049 Petunia axillaris
Peaxi162Scf00285g00055 Petunia axillaris
Peaxi162Scf00285g00422 Petunia axillaris
Peaxi162Scf00285g00512 Petunia axillaris
PGR004G0059 Punica granatum
PGR004G1139 Punica granatum
PGR004G1342 Punica granatum
PGR004G2349 Punica granatum
PGR004G2812 Punica granatum
PGSC0003DMG400008492 Solanum tuberosum
PGSC0003DMG401022197 Solanum tuberosum
Phvul.001G140000 Phaseolus vulgaris
Phvul.002G201600 Phaseolus vulgaris
Phvul.002G201700 Phaseolus vulgaris
Phvul.002G201800 Phaseolus vulgaris
Phvul.002G201900 Phaseolus vulgaris
Phvul.009G180501 Phaseolus vulgaris
Phvul.011G028800 Phaseolus vulgaris
Potri.006G058500 Populus trichocarpa
Potri.006G058600 Populus trichocarpa
Potri.016G049400 Populus trichocarpa
Potri.016G049600 Populus trichocarpa
Prupe.7G072600 Prunus persica
Prupe.7G072700 Prunus persica
Psat3g047600 Pisum sativum
Psat3g069920 Pisum sativum
Psat3g153320 Pisum sativum
Psat4g136200 Pisum sativum
Psat6g048520 Pisum sativum
Psat6g048560 Pisum sativum
Psat7g094320 Pisum sativum
Psat7g094360 Pisum sativum
Psat7g094840 Pisum sativum
Psat7g095440 Pisum sativum
PSO017G2084 Papaver somniferum
PSO017G5062 Papaver somniferum
PSO017G6595 Papaver somniferum
PSO049G0001 Papaver somniferum
PSO063G1550 Papaver somniferum
PSO063G4455 Papaver somniferum
PSO063G5344 Papaver somniferum
PSO063G6013 Papaver somniferum
PSO170G0427 Papaver somniferum
PSO170G4921 Papaver somniferum
PSO662G0001 Papaver somniferum
PSO675G4849 Papaver somniferum
PSO675G6661 Papaver somniferum
QL07p022693 Quercus lobata
QL07p022730 Quercus lobata
QL93p2022_0035 Quercus lobata
QL93p2022_0173 Quercus lobata
RcHm_v2.0_Chr3g0480401 Rosa chinensis
RcHm_v2.0_Chr3g0480411 Rosa chinensis
Rhsim03G0009900 Rhododendron simsii
Rhsim03G0010000 Rhododendron simsii
Rhsim03G0010100 Rhododendron simsii
Rhsim03G0010300 Rhododendron simsii
Rhsim03G0010400 Rhododendron simsii
Sabra06G0041800 Salix brachista
Sabra06G0041900 Salix brachista
Sabra16G0053400 Salix brachista
SalBow1G2822 Salvia bowleyana
SalBow1G5450 Salvia bowleyana
SalBow3G0086 Salvia bowleyana
SalBow3G0878 Salvia bowleyana
SalBow5G1478 Salvia bowleyana
SalBow5G3433 Salvia bowleyana
SalBow5G3620 Salvia bowleyana
SalBow5G4953 Salvia bowleyana
SalBow5G5116 Salvia bowleyana
SalBow6G0177 Salvia bowleyana
SalBow6G0499 Salvia bowleyana
SalBow6G2420 Salvia bowleyana
SalBow6G3930 Salvia bowleyana
Sc19g0006910 Simmondsia chinensis
Sc19g0006920 Simmondsia chinensis
Sc19g0006930 Simmondsia chinensis
Sc21g0000240 Simmondsia chinensis
Sed0009305 Sechium edule
Sed0010185 Sechium edule
Sed0015437 Sechium edule
Sed0015486 Sechium edule
Sed0017610 Sechium edule
Sed0025152 Sechium edule
Sed0027277 Sechium edule
SGA_v2.0_scaffold79G25629 Striga asiatica
Solyc07g065090.2 Solanum lycopersicum
Solyc09g014480.3 Solanum lycopersicum
Solyc09g014590.3 Solanum lycopersicum
Sopen07g033300 Solanum pennellii
Sopen09g007290 Solanum pennellii
Sopen09g007440 Solanum pennellii
Sp3g10380 Schrenkiella parvula
Sp6g35990 Schrenkiella parvula
Sp6g36000 Schrenkiella parvula
TAR623G0099 Trochodendron aralioides
TAR623G1144 Trochodendron aralioides
TAR623G1249 Trochodendron aralioides
TAR633G0395 Trochodendron aralioides
THA.LOC104809922 Tarenaya hassleriana
THA.LOC104826763 Tarenaya hassleriana
THA.LOC104826764 Tarenaya hassleriana
Thecc.05G167200 Theobroma cacao
Thecc.05G167300 Theobroma cacao
Thhalv10014071m.g Eutrema salsugineum
Thhalv10014077m.g Eutrema salsugineum
Thhalv10014115m.g Eutrema salsugineum
Thhalv10021132m.g Eutrema salsugineum
TPR.G10371 Trifolium pratense
TPR.G13706 Trifolium pratense
TPR.G19792 Trifolium pratense
TPR.G19812 Trifolium pratense
TPR.G23143 Trifolium pratense
TPR.G23146 Trifolium pratense
TPR.G23150 Trifolium pratense
TPR.G23785 Trifolium pratense
TPR.G23788 Trifolium pratense
TPR.G23793 Trifolium pratense
TPR.G23802 Trifolium pratense
TPR.G23816 Trifolium pratense
TPR.G23837 Trifolium pratense
TPR.G27564 Trifolium pratense
TPR.G31484 Trifolium pratense
TPR.G39861 Trifolium pratense
TWI77G0439 Tripterygium wilfordii
vmacro07939 Vaccinium macrocarpon
vmacro07940 Vaccinium macrocarpon
vmacro07941 Vaccinium macrocarpon
VMungo0251G0095 Vigna mungo
VMungo0251G1247 Vigna mungo
VMungo1309G1909 Vigna mungo
VMungo1309G2727 Vigna mungo
VMungo1383G1226 Vigna mungo
Zm00001eb020600 Zea mays
Zm00001eb079860 Zea mays
Zm00001eb199890 Zea mays
Zm00001eb267480 Zea mays
Zm00001eb316780 Zea mays
Zm00001eb324700 Zea mays

User provided reference genes

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