Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia17653 Actinidia chinensis
ATR0686G139 Amborella trichopoda
Atru.chr1.1737 Acer truncatum
Atru.chr1.1738 Acer truncatum
Atru.chr1.1775 Acer truncatum
Atru.chr1.1776 Acer truncatum
Atru.chr10.1452 Acer truncatum
Atru.chr11.572 Acer truncatum
Atru.chr13.1926 Acer truncatum
Atru.chr3.3033 Acer truncatum
Atru.chr5.2616 Acer truncatum
AUR62023252 Chenopodium quinoa
CAN.G11.14 Capsicum annuum
CANSAT01G2817 Cannabis sativa
Ciclev10011294m.g Citrus clementina
Ciclev10013760m.g Citrus clementina
CiPaw.04G045400 Carya illinoinensis
CiPaw.15G020600 Carya illinoinensis
COL.COLO4_10042 Corchorus olitorius
Cpa.g.sc116.14 Carica papaya
CsaV3_5G023990 Cucumis sativus L.
CSS0004053 Camellia sinensis var. sinensis
CSS0020998 Camellia sinensis var. sinensis
Dinv19003 Davidia involucrata
Duzib106G0239 Durio zibethinus
ECA232G2927 Erigeron canadensis
ECA232G3819 Erigeron canadensis
ECA236G3377 Erigeron canadensis
ECA238G0783 Erigeron canadensis
Eucgr.K01284 Eucalyptus grandis
FAN15G2481 Fragaria x ananassa
FAN26G0932 Fragaria x ananassa
FAN28G1554 Fragaria x ananassa
Glyma.10G201800 Glycine max
Gohir.A06G176700 Gossypium hirsutum
Gohir.A11G071450 Gossypium hirsutum
Gohir.D06G186000 Gossypium hirsutum
Gorai.010G218300 Gossypium raimondii
GSVIVG01014620001 Vitis vinifera
GSVIVG01030888001 Vitis vinifera
HanXRQChr09g0262351 Helianthus annuus
HanXRQChr11g0325241 Helianthus annuus
Haze_21153 Corylus avellana
Hma1.2p1_1820F.1_g304200 Hydrangea macrophylla
Lj6g0007148 Lotus japonicus
Lsat_1_v5_gn_2_81300 Lactuca sativa
Lsat_1_v5_gn_3_106041 Lactuca sativa
Lsat_1_v5_gn_4_155061 Lactuca sativa
Manes.03G097100 Manihot esculenta
MD09G1260400 Malus domestica
Medtr4g058025 Medicago truncatula
Medtr5g077020 Medicago truncatula
MELO3C020308.2 Cucumis melo
Migut.L00474 Erythranthe guttata
MSTRG.3530 Avicennia marina
Nitab4.5_0000625g0020 Nicotiana tabacum
Nitab4.5_0000901g0120 Nicotiana tabacum
Nn3g19299 Nelumbo nucifera
Os01g0124900 Oryza sativa ssp. japonica
Os01g0548000 Oryza sativa ssp. japonica
Os02g0467500 Oryza sativa ssp. japonica
Os08g0361300 Oryza sativa ssp. japonica
Peaxi162Scf00104g01921 Petunia axillaris
PGSC0003DMG400016690 Solanum tuberosum
PGSC0003DMG400016694 Solanum tuberosum
PGSC0003DMG402016693 Solanum tuberosum
Phvul.007G105266 Phaseolus vulgaris
Phvul.007G105332 Phaseolus vulgaris
Potri.004G091800 Populus trichocarpa
Potri.010G214500 Populus trichocarpa
Prupe.3G152100 Prunus persica
Psat0s1696g0040 Pisum sativum
QL02p048445 Quercus lobata
QL03p004685 Quercus lobata
QL03p022565 Quercus lobata
Rhsim02G0142200 Rhododendron simsii
Rhsim04G0060600 Rhododendron simsii
Rhsim04G0115000 Rhododendron simsii
Rhsim05G0139900 Rhododendron simsii
Rhsim08G0168100 Rhododendron simsii
Rhsim09G0109800 Rhododendron simsii
Sabra10G0165800 Salix brachista
ScUNg0001080 Simmondsia chinensis
SGA_v2.0_scaffold174G39280 Striga asiatica
Solyc00g076250.1 Solanum lycopersicum
Solyc03g043600.3 Solanum lycopersicum
Sopen03g007370 Solanum pennellii
Sopen03g007480 Solanum pennellii
TAR624G0113 Trochodendron aralioides
THA.LOC104805598 Tarenaya hassleriana
Thecc.10G176700 Theobroma cacao
TPR.G5858 Trifolium pratense
TWI18G0760 Tripterygium wilfordii
unitig_32.g11884 Utricularia gibba
vmacro09225 Vaccinium macrocarpon

User provided reference genes

Program Settings