Gene: Nitab4.5_0000901g0120

General Information

Structural Information

Species Nicotiana tabacum
Gene Identifier Nitab4.5_0000901g0120
Transcript Identifier Nitab4.5_0000901g0120.1
Gene Type Coding gene
Location Nitab4.5_0000901 : 599613-616592 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D007651
#Genes/#Species 95/55
Phylogenetic origin

ID ORTHO05D001192
#Genes/#Species 460/91
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

tid Nitab4.5_0000901g0120.1
SR1-identifier Nta21g05460.1

Descriptions

Short descriptions
Ortholog descriptions

Description High mobility group box domain, Aminotransferase-like, plant mobile domain, E3 ubiquitin-protein ligase SINA like, SIAH-type domain, Zinc finger, RING/FYVE/PHD-type, Zinc finger, RING-type, Zinc finger, SIAH-type, TRAF-like, Seven-in-absentia protein, TRAF-like domain

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006511	IEA	InterPro	ubiquitin-dependent protein catabolic process
GO:0007275	IEA	InterPro	multicellular organism development
GO:0009411	ISO	PLAZA Integrative Orthology	response to UV	AT5G37890
GO:0016567	ISO	PLAZA Integrative Orthology	protein ubiquitination	AT5G37890

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0061630	ISO	PLAZA Integrative Orthology	ubiquitin protein ligase activity	AT5G37890

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005737	IEA	InterPro	cytoplasm

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR036910	High mobility group box domain superfamily
IPR009071	High mobility group box domain
IPR018121	Seven-in-absentia protein, TRAF-like domain
IPR044286	E3 ubiquitin-protein ligase SINA-like, plant
IPR019557	Aminotransferase-like, plant mobile domain
IPR013083	Zinc finger, RING/FYVE/PHD-type

Mapman id	Description
19.2.2.1.4.3.5	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.E3 ubiquitin ligase (SINA)