Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p19210 Brassica napus
Aa31LG10G2840 Aethionema arabicum
Actinidia32110 Actinidia chinensis
Ah.01g017290 Amaranthus hybridus
Ah.16g103230 Amaranthus hybridus
Ah.16g103240 Amaranthus hybridus
Ah.16g103250 Amaranthus hybridus
AL1G60010 Arabidopsis lyrata
Aqoxy5G00202 Aquilegia oxysepala
Aqoxy7G01368 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.X8VU69 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y4G0P0 Arachis hypogaea
AT1G51965 Arabidopsis thaliana
ATR0751G068 Amborella trichopoda
Atru.BG.161.p Acer truncatum
AUR62022237 Chenopodium quinoa
AUR62031951 Chenopodium quinoa
BcaB02g11032 Brassica carinata
BcaC08g43959 Brassica carinata
BolC6t36524H Brassica oleracea
BraA05t20827Z Brassica rapa
C06p13600 Brassica napus
CAN.G1143.23 Capsicum annuum
CANSAT35G0590 Cannabis sativa
CARHR042130 Cardamine hirsuta
Carub.0001s4090 Capsella rubella
Ca_00856_v3 Cicer arietinum L.
Cc06_g12800 Coffea canephora
CDE05G2407 Ceratophyllum demersum
Cfa003634 Carpinus fangiana
Ciclev10025103m.g Citrus clementina
CiPaw.02G144900 Carya illinoinensis
ClCG09G008130 Citrullus lanatus
COL.COLO4_27631 Corchorus olitorius
Cpa.g.sc25.26 Carica papaya
CsaV3_7G026910 Cucumis sativus L.
CSS0004060 Camellia sinensis var. sinensis
CSS0040101 Camellia sinensis var. sinensis
Dinv27397 Davidia involucrata
Duzib251G0222 Durio zibethinus
EL10Ac9g21188 Beta vulgaris
Eucgr.F03084 Eucalyptus grandis
FAN02G2393 Fragaria x ananassa
FAN05G5710 Fragaria x ananassa
FAN09G1056 Fragaria x ananassa
FAN14G1294 Fragaria x ananassa
FvH4_6g32590 Fragaria vesca
Glyma.15G131800 Glycine max
Gohir.A03G111600 Gossypium hirsutum
Gohir.D02G136200 Gossypium hirsutum
Gorai.005G152200 Gossypium raimondii
GSVIVG01016956001 Vitis vinifera
HanXRQChr11g0348741 Helianthus annuus
Haze_15863 Corylus avellana
Hma1.2p1_0430F.1_g151250 Hydrangea macrophylla
HPP92_000532 Vanilla planifolia
Hund07627 Selenicereus undatus
Lalb_Chr20g0120141 Lupinus albus
Lj6g0022790 Lotus japonicus
Lj9A311T59 Lonicera japonica
Lsat_1_v5_gn_4_98021 Lactuca sativa
Manes.11G031901 Manihot esculenta
MBI04_g06993_MAGBIO Magnolia biondii
MD09G1200200 Malus domestica
MD15G1412800 Malus domestica
Medtr2g030540 Medicago truncatula
MELO3C012722.2 Cucumis melo
Migut.L00048 Erythranthe guttata
Nitab4.5_0004969g0060 Nicotiana tabacum
Nitab4.5_0005085g0030 Nicotiana tabacum
Nn2g12740 Nelumbo nucifera
Nn3g18181 Nelumbo nucifera
Os02g0226900 Oryza sativa ssp. japonica
Peaxi162Scf00038g01145 Petunia axillaris
PGSC0003DMG400002522 Solanum tuberosum
Phvul.006G126800 Phaseolus vulgaris
Potri.013G105000 Populus trichocarpa
Prupe.3G056800 Prunus persica
Psat1g166520 Pisum sativum
PSO832G0057 Papaver somniferum
QL05p019112 Quercus lobata
RcHm_v2.0_Chr2g0141041 Rosa chinensis
Rhsim08G0228600 Rhododendron simsii
Sabra13G0090700 Salix brachista
SalBow1G5626 Salvia bowleyana
Sc15g0001700 Simmondsia chinensis
Sc15g0001710 Simmondsia chinensis
Sed0016070 Sechium edule
SEGI_18978 Sequoiadendron giganteum
SEGI_37723 Sequoiadendron giganteum
SGA_v2.0_scaffold115G32057 Striga asiatica
SGA_v2.0_scaffold265G46057 Striga asiatica
SHI11130 Sapria himalayana
Solyc03g121110.3 Solanum lycopersicum
Sopen03g039940 Solanum pennellii
Sp1g38610 Schrenkiella parvula
TAR636G0386 Trochodendron aralioides
TAR636G1169 Trochodendron aralioides
THA.LOC104810542 Tarenaya hassleriana
Thecc.02G309100 Theobroma cacao
Thhalv10011294m.g Eutrema salsugineum
TPR.G26324 Trifolium pratense
vmacro18843 Vaccinium macrocarpon
VMungo0540G1340 Vigna mungo
Zm00001eb205030 Zea mays

User provided reference genes

Program Settings