Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p47770 Brassica napus
A09p20520 Brassica napus
Aa31LG5G3580 Aethionema arabicum
Actinidia05467 Actinidia chinensis
Actinidia08446 Actinidia chinensis
AL390U10010 Arabidopsis lyrata
Aqoxy5G00327 Aquilegia oxysepala
AT5G43650 Arabidopsis thaliana
ATR0665G548 Amborella trichopoda
Atru.chr4.2233 Acer truncatum
BcaB07g31004 Brassica carinata
BcaC04g21907 Brassica carinata
BcaC06g31685 Brassica carinata
BcaC06g34638 Brassica carinata
BolC7t43151H Brassica oleracea
BolC9t55498H Brassica oleracea
BraA06t27645Z Brassica rapa
BraA09t37658Z Brassica rapa
C07p26230 Brassica napus
C09p25930 Brassica napus
CAN.G1007.15 Capsicum annuum
CANSAT78G2280 Cannabis sativa
CARHR006300 Cardamine hirsuta
Carub.0008s0499 Capsella rubella
Cc03_g04820 Coffea canephora
Cfa008380 Carpinus fangiana
Ciclev10005777m.g Citrus clementina
CiPaw.01G190600 Carya illinoinensis
CiPaw.02G116600 Carya illinoinensis
ClCG06G006720 Citrullus lanatus
COL.COLO4_15786 Corchorus olitorius
Cpa.g.sc58.45 Carica papaya
CsaV3_2G013060 Cucumis sativus L.
CSS0019068 Camellia sinensis var. sinensis
DCAR_027275 Daucus carota
DCAR_027276 Daucus carota
Dinv29914 Davidia involucrata
Dinv44631 Davidia involucrata
Duzib052G0756 Durio zibethinus
Duzib151G0028 Durio zibethinus
Duzib151G0820 Durio zibethinus
Duzib212G0514 Durio zibethinus
Eucgr.H00196 Eucalyptus grandis
Eucgr.J01563 Eucalyptus grandis
FAN12G1817 Fragaria x ananassa
FvH4_4g02610 Fragaria vesca
Glyma.02G000800 Glycine max
Gohir.A02G035500 Gossypium hirsutum
Gohir.A09G222900 Gossypium hirsutum
Gohir.D02G042400 Gossypium hirsutum
Gohir.D09G224900 Gossypium hirsutum
Gorai.005G046700 Gossypium raimondii
Gorai.006G246400 Gossypium raimondii
GSVIVG01018111001 Vitis vinifera
Haze_11297 Corylus avellana
Haze_11299 Corylus avellana
Hma1.2p1_0893F.1_g233480 Hydrangea macrophylla
HPP92_023463 Vanilla planifolia
HPP92_023468 Vanilla planifolia
HPP92_027840 Vanilla planifolia
Lalb_Chr03g0037861 Lupinus albus
Lj6C656T7 Lonicera japonica
Manes.03G169100 Manihot esculenta
MD13G1206900 Malus domestica
MD16G1208400 Malus domestica
Medtr1g040435 Medicago truncatula
MELO3C026778.2 Cucumis melo
Migut.G00433 Erythranthe guttata
MSTRG.4097 Avicennia marina
Nitab4.5_0000525g0160 Nicotiana tabacum
Nitab4.5_0004798g0070 Nicotiana tabacum
Nn1g02593 Nelumbo nucifera
Nn3g19525 Nelumbo nucifera
Oeu008788.2 Olea europaea
Os01g0773800 Oryza sativa ssp. japonica
Os03g0741100 Oryza sativa ssp. japonica
Peaxi162Scf00813g00118 Petunia axillaris
PGR031G3332 Punica granatum
Phvul.007G280700 Phaseolus vulgaris
Potri.008G161800 Populus trichocarpa
Potri.010G077000 Populus trichocarpa
Prupe.1G030500 Prunus persica
Psat6g102240 Pisum sativum
QL06p015621 Quercus lobata
QL06p015626 Quercus lobata
RcHm_v2.0_Chr4g0390311 Rosa chinensis
Rhsim02G0032900 Rhododendron simsii
Sabra08G0123600 Salix brachista
Sabra10G0031800 Salix brachista
Sc13g0004990 Simmondsia chinensis
Sed0000846 Sechium edule
Sed0019243 Sechium edule
Sed0021571 Sechium edule
Solyc09g083360.3 Solanum lycopersicum
Sopen09g032280 Solanum pennellii
SpUn0429_0010 Schrenkiella parvula
SpUn0744_0010 Schrenkiella parvula
TAR365G0907 Trochodendron aralioides
TAR375G0391 Trochodendron aralioides
TAR636G2640 Trochodendron aralioides
THA.LOC104801097 Tarenaya hassleriana
THA.LOC104827376 Tarenaya hassleriana
Thecc.04G245800 Theobroma cacao
Thhalv10003353m.g Eutrema salsugineum
TPR.G22479 Trifolium pratense
TWI09G1088 Tripterygium wilfordii
TWI73G0753 Tripterygium wilfordii
Zm00001eb056760 Zea mays
Zm00001eb370010 Zea mays

User provided reference genes

Program Settings