Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p06880 Brassica napus
Aa31sc23G190 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4841 Anthoceros agrestis
Actinidia37244 Actinidia chinensis
AL8G36290 Arabidopsis lyrata
Aqoxy4G03018 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.73EBMB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7SC5JI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NUH3V1 Arachis hypogaea
AT5G59770 Arabidopsis thaliana
ATR0033G009 Amborella trichopoda
Atru.chr3.3816 Acer truncatum
AUR62001839 Chenopodium quinoa
AUR62009627 Chenopodium quinoa
BcaB05g22577 Brassica carinata
BolC2t07319H Brassica oleracea
BolC3t13793H Brassica oleracea
BraA02t05767Z Brassica rapa
C02p12160 Brassica napus
C03p13310 Brassica napus
CAN.G420.9 Capsicum annuum
CANSAT54G2014 Cannabis sativa
CARHR273350 Cardamine hirsuta
Carub.0008s2043 Capsella rubella
Ca_19192_v3 Cicer arietinum L.
Cc01_g12270 Coffea canephora
CDE11G0069 Ceratophyllum demersum
Cfa011446 Carpinus fangiana
Ciclev10029246m.g Citrus clementina
CiPaw.14G072400 Carya illinoinensis
ClCG02G020450 Citrullus lanatus
COL.COLO4_18444 Corchorus olitorius
Cpa.g.sc190.38 Carica papaya
CsaV3_6G022170 Cucumis sativus L.
CSS0014951 Camellia sinensis var. sinensis
CSS0047106 Camellia sinensis var. sinensis
DCAR_015600 Daucus carota
DCAR_018881 Daucus carota
Dinv32847 Davidia involucrata
ECA236G1878 Erigeron canadensis
EL10Ac7g15961 Beta vulgaris
Eucgr.B02402 Eucalyptus grandis
Eucgr.L03445 Eucalyptus grandis
FAN11G1442 Fragaria x ananassa
FAN16G0269 Fragaria x ananassa
FAN21G0153 Fragaria x ananassa
FAN25G0594 Fragaria x ananassa
FvH4_3g34950 Fragaria vesca
Glyma.11G143000 Glycine max
Glyma.12G066150 Glycine max
Gohir.A03G038600 Gossypium hirsutum
Gohir.D03G129800 Gossypium hirsutum
Gorai.003G136500 Gossypium raimondii
GSVIVG01025036001 Vitis vinifera
HanXRQChr06g0175991 Helianthus annuus
Haze_24028 Corylus avellana
Hma1.2p1_0846F.1_g227610 Hydrangea macrophylla
Hma1.2p1_0846F.1_g227620 Hydrangea macrophylla
Hund18941 Selenicereus undatus
Lalb_Chr01g0003811 Lupinus albus
Lalb_Chr19g0137671 Lupinus albus
Lj3g0003411 Lotus japonicus
Lsat_1_v5_gn_8_78640 Lactuca sativa
Manes.11G134400 Manihot esculenta
Mapoly0010s0013 Marchantia polymorpha
MBI05_g35606_MAGBIO Magnolia biondii
MBI05_g38489_MAGBIO Magnolia biondii
MD03G1100000 Malus domestica
Medtr4g060990 Medicago truncatula
MELO3C013676.2 Cucumis melo
Migut.D02132 Erythranthe guttata
MSTRG.18595 Avicennia marina
Nitab4.5_0000610g0300 Nicotiana tabacum
Nitab4.5_0003179g0020 Nicotiana tabacum
Nn2g10480 Nelumbo nucifera
Oeu040291.1 Olea europaea
Os05g0460800 Oryza sativa ssp. japonica
Peaxi162Scf00411g00012 Petunia axillaris
PGSC0003DMG401015537 Solanum tuberosum
Phvul.011G067100 Phaseolus vulgaris
Potri.001G235400 Populus trichocarpa
Pp3c12_26220 Physcomitrium patens
Prupe.6G085100 Prunus persica
Psat6g139760 Pisum sativum
Psat7g222600 Pisum sativum
PSO339G1320 Papaver somniferum
PSO384G1952 Papaver somniferum
QL01p033425 Quercus lobata
RcHm_v2.0_Chr5g0062801 Rosa chinensis
Rhsim13G0087100 Rhododendron simsii
Sabra16G0141600 Salix brachista
SalBow3G3377 Salvia bowleyana
Sc12g0001700 Simmondsia chinensis
Sed0026895 Sechium edule
SEGI_05585 Sequoiadendron giganteum
SEGI_20662 Sequoiadendron giganteum
SMO343G0124 Selaginella moellendorffii
Solyc11g073130.2 Solanum lycopersicum
Sopen11g030780 Solanum pennellii
Sp6g21440 Schrenkiella parvula
THA.LOC104810801 Tarenaya hassleriana
Thecc.09G327900 Theobroma cacao
Thhalv10014612m.g Eutrema salsugineum
Thhalv10027965m.g Eutrema salsugineum
TPR.G2998 Trifolium pratense
TWI79G0669 Tripterygium wilfordii
unitig_899.g14897 Utricularia gibba
vmacro03115 Vaccinium macrocarpon
VMungo1127G1709 Vigna mungo
Zm00001eb351400 Zea mays

User provided reference genes

Program Settings